Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d038741_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:6:163651451:163652698:-1 gene:Zm00001d038741 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pistil-specific extensin-like protein

Sequence

ATGGCCTCCTTGAAGGACCACTGTGCCGTGGTGGCAGTTGTAGTGGCGATCTGCTTCGTC
GTCCTCGCCGCCGCCCTCCCTTCGCACGCGTCGACGGCGGTGGACGAGCCGGCGAAGTAT
AAGCCCAGCAGAGCGCCAGCGCCGTCCCCTGCATCTGCATCATCCTACGTCCCGCCGCCG
GTCCAGCCCGTGATCGTCGTCCAGGGCGTCATCTACTGCAAGTCCTGCAAGCTCAGGGGC
TACAACAGCGGCATGGACGCGTCCCCTCTCCCCAATGCGACGGCGAGCCTGGTGTGCTAC
GGCGACGCGGAGAGCAAGTACCGGGTGCTGAACCAGACGAGCACGGCCACCGACACGAAC
GGCTACTTCATCGTGATGGTGTACGACGTGGGCATGTTCGACCGCCGCAGCTGCAGGCTG
TACCTCCGCTCCTCGCCGACGGCGCTCTGCGCCGCGCCCTTCATCCCGTCCAACCCCAAG
CTGGGGCTCACCCTCGTGAGGGACCGCGCGGCCACGGCGCCCAGGGGCGCGCGCGGCATC
TTCCACCCCAAGACTGCGCTCATGTACGCGCCGGGCACCGGCGGCAAGTGCCCGCCGTAC
TGA

Peptide Sequence

PEP ID

Zm00001d038741_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:6:163651451:163652698:-1 gene:Zm00001d038741 transcript:Zm00001d038741_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pistil-specific extensin-like protein

Sequence

MASLKDHCAVVAVVVAICFVVLAAALPSHASTAVDEPAKYKPSRAPAPSPASASSYVPPP
VQPVIVVQGVIYCKSCKLRGYNSGMDASPLPNATASLVCYGDAESKYRVLNQTSTATDTN
GYFIVMVYDVGMFDRRSCRLYLRSSPTALCAAPFIPSNPKLGLTLVRDRAATAPRGARGI
FHPKTALMYAPGTGGKCPPY

Transcript Sequence

Transcript ID

Zm00001d038741_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:163651451:163652698:-1 gene:Zm00001d038741 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pistil-specific extensin-like protein

Sequence

TTGTTTGTTTGATGAGAAAGCGCAAACGGGAGAGAAACCCTAGCTGGCTAGCTCTCCCGC
CTCTCTATAAATCAGCGCAGCCTGTTCGTACAGCGCCACACACCACAGTTAGCTTCCTTT
CAATTATTGTATTTCAGTCGAGTTGCTAAACAACACGAACTCCTCAGTCGTTTGAGTTTT
GAGGAGGCAAGCAAGAGGACCCATCGATGGCCTCCTTGAAGGACCACTGTGCCGTGGTGG
CAGTTGTAGTGGCGATCTGCTTCGTCGTCCTCGCCGCCGCCCTCCCTTCGCACGCGTCGA
CGGCGGTGGACGAGCCGGCGAAGTATAAGCCCAGCAGAGCGCCAGCGCCGTCCCCTGCAT
CTGCATCATCCTACGTCCCGCCGCCGGTCCAGCCCGTGATCGTCGTCCAGGGCGTCATCT
ACTGCAAGTCCTGCAAGCTCAGGGGCTACAACAGCGGCATGGACGCGTCCCCTCTCCCCA
ATGCGACGGCGAGCCTGGTGTGCTACGGCGACGCGGAGAGCAAGTACCGGGTGCTGAACC
AGACGAGCACGGCCACCGACACGAACGGCTACTTCATCGTGATGGTGTACGACGTGGGCA
TGTTCGACCGCCGCAGCTGCAGGCTGTACCTCCGCTCCTCGCCGACGGCGCTCTGCGCCG
CGCCCTTCATCCCGTCCAACCCCAAGCTGGGGCTCACCCTCGTGAGGGACCGCGCGGCCA
CGGCGCCCAGGGGCGCGCGCGGCATCTTCCACCCCAAGACTGCGCTCATGTACGCGCCGG
GCACCGGCGGCAAGTGCCCGCCGTACTGATGTGATGGTGCGTACGTGGTCTGGACTCGGG
AGTCGGAGCGGCGCCATGAGGGGGTGTTCACTGGTGGTGCATGGGCGGCATGCATGGATC
GTCGTCGTGGGTTTGGACTTTGGTCAAGAGGACAATGTCAGAGGCAAAAAAATAAAAATA
AAAAAGGAGAAGTATGTGGTGATTGTTGTCACGACGTCCGTATTGTGTCCTCGTTTTAGT
CGATACTCGATGGAGTATCTGTTGACTGTTGCTGTTCGTTGAGTCTGTGTAACCGTTTCT
TCGTCAATCGGTCAATCCTGCCTTTGGAC