Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d038733_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:6:163540535:163542535:1 gene:Zm00001d038733 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGTCGCTGTCGAAGCCGGTCTCGGCACGCCGCCTCGTGCCGGCGCTCTTCCCGCTCGCG CACGCGGACGCCGCCTCGGCCACGGCTTCCCGCCGCGAGCGCCGTAAGGACACGTTCGTC GCGACGCCCCCGATCCCCGCGCCTTCCCCGCGGGCAGTGCGCCTCGCGGAGCCGCTCCCC ACGCTGGCGCCGTCACGCCTCGCGTTCCACAACCGGATCCTCGCGCTCCTCTCGGGGCCC CAGGCCGACCTCCCCGAGGCGGCGCTCCTCACCCGCCACGCGCTCCACTCCAACTGCCGC CCCTCATCCTTCACCTGCGCCGCCGTCCTCGCCGCGCTCCTCCGCACGCGCCGCCTCGAA GACTTCTTCGCGCTGCACCGCTTCGCGCTCCAAGCCGCCGTCCCGCCCACCGCCGCCACG CACGTGCTCTACCTATCCGCGCTCGCCGCGCGCCGCCTCGCCGACGACGCGCTCCACCAC CTCCGCATCATCGCCCGCCCCGGCTCCCCCGTGCCGCCCTCCCCGACGGCCTACCGCGTC GTCGTCGAGTGCCTCGTTGCAGACCACGGCCGGCTCGCGGATGCCGTCAAGCTCAAGGAT GAGATGCTCACCTCTGGATTCGTCGGGCCGGATCCCAAGGTCTACAGCCTTCTCATGGCT GGGTTCGTGGGTGCTGGGGATGGAGCCAAAGCCTTGGAGCTGTACCAAGAACTCAAGGAC AAGGTTGGGGGCGAACCAATTCTGGATGGCATTGTGTACGGGACTCTCATGAAGGCGTAC TTCCTTATGGGAACGGGGGAAAAGGTTATGGAGTGTTACAAAGAGGTGCTGTGTGTTGAA TCTGCGGTGAGGTTTGGGGCCGAGAGCTACAATGAGGTGGTTGATGCGCTTGGGCAGAAT GGGAGGTTGGAGGATGCACTTAAGCTGTTCGACAGAATGCTTGAGGAACATGACCCGCCA CTGCGGATTGCAGTTGATCTGAGAAGCTTCAGGGTGATGGTTGATACCTATTGTGCTGCT GGGAGATTTGAAGATGCAGTTGCAGTGTTCAGAAGAATGGGGGAATGGAAGCTGGTGCCT GATGTGGCATCCTATAATAATTTGATTCGGCACCTGCAGATTAACCAGCTGATAGATAAG GCGGAGGTGCTCTACAATGAGATGTGTGAGAGTGGTGTTGGTGCGGATAAGGAGACATAT TTACTGCTCACGGAAGCATGCTTCAGTGTTGATCGCATCGATGATGGTATCTCTTACTTT GACAAAATGGACGAATTGGAGCTGAAGCCTGATGCAACTGCATATCATAAACTTATTGAT GGCCTGGTGGGTTTCAGTATGGTCGACAAGGCTCAGGAATACTTCAATCAGATGAAGGAG AAGGGAGTTAACCCAAGCATCTCAAGCTACGAGACATTGCTGAAGGCATATATTGCTGCT GACCGGTTGGATGATGCAGTCAATGTTGCAAAAGGTATTCTTTTGAATGAGAAGGTTCTG TTCAGCTATGGAATGAGGGAGCTTTTAGAAGGAGCATTACGTGGAGATGGGAGGGGAAAT GACATCGCCAAGTTATATGAGGATGTGGAGAGGGAAAAGGCTGAAGCGGAAGCCCGGGCT GCAGAAGAGAAGGCGAGGGCAGAGGCTCTTGCCAGAGAAGAGAGGGAGAGGAGGAGAGCA GAGATTGCTGCTAAGGATGAAGCCGCAGCTAAAGCCAGTGCCGCTGCCATTGAAGCTATC CTAGCCCATAAAAGGAAGACAGAGAATGAAGGAGGAGCGCCTGCTCCTGATGCAAACACC CTGGATGGTGGCTTTCTCAGTAAGCTAGGCCTTAAAACAGCCGGAGAAGGGGCACTTCAA GACAATCCAACAGAAAGTGGAGACGATGGAGAAGGGGCACTTCATGGCAATCCAACAGAA AGTGGAGACGATGGAGAGGGGGCACTTCAAGGCAATCCAACGGAAAGAAATGGAGGCAAT GTGCAGCAGGGATATCTGTGA

Peptide Sequence

PEP ID	Zm00001d038733_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:6:163540535:163542535:1 gene:Zm00001d038733 transcript:Zm00001d038733_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	MSLSKPVSARRLVPALFPLAHADAASATASRRERRKDTFVATPPIPAPSPRAVRLAEPLP TLAPSRLAFHNRILALLSGPQADLPEAALLTRHALHSNCRPSSFTCAAVLAALLRTRRLE DFFALHRFALQAAVPPTAATHVLYLSALAARRLADDALHHLRIIARPGSPVPPSPTAYRV VVECLVADHGRLADAVKLKDEMLTSGFVGPDPKVYSLLMAGFVGAGDGAKALELYQELKD KVGGEPILDGIVYGTLMKAYFLMGTGEKVMECYKEVLCVESAVRFGAESYNEVVDALGQN GRLEDALKLFDRMLEEHDPPLRIAVDLRSFRVMVDTYCAAGRFEDAVAVFRRMGEWKLVP DVASYNNLIRHLQINQLIDKAEVLYNEMCESGVGADKETYLLLTEACFSVDRIDDGISYF DKMDELELKPDATAYHKLIDGLVGFSMVDKAQEYFNQMKEKGVNPSISSYETLLKAYIAA DRLDDAVNVAKGILLNEKVLFSYGMRELLEGALRGDGRGNDIAKLYEDVEREKAEAEARA AEEKARAEALAREERERRRAEIAAKDEAAAKASAAAIEAILAHKRKTENEGGAPAPDANT LDGGFLSKLGLKTAGEGALQDNPTESGDDGEGALHGNPTESGDDGEGALQGNPTERNGGN VQQGYL

Transcript Sequence

Transcript ID	Zm00001d038733_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:163540535:163542535:1 gene:Zm00001d038733 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGTCGCTGTCGAAGCCGGTCTCGGCACGCCGCCTCGTGCCGGCGCTCTTCCCGCTCGCG CACGCGGACGCCGCCTCGGCCACGGCTTCCCGCCGCGAGCGCCGTAAGGACACGTTCGTC GCGACGCCCCCGATCCCCGCGCCTTCCCCGCGGGCAGTGCGCCTCGCGGAGCCGCTCCCC ACGCTGGCGCCGTCACGCCTCGCGTTCCACAACCGGATCCTCGCGCTCCTCTCGGGGCCC CAGGCCGACCTCCCCGAGGCGGCGCTCCTCACCCGCCACGCGCTCCACTCCAACTGCCGC CCCTCATCCTTCACCTGCGCCGCCGTCCTCGCCGCGCTCCTCCGCACGCGCCGCCTCGAA GACTTCTTCGCGCTGCACCGCTTCGCGCTCCAAGCCGCCGTCCCGCCCACCGCCGCCACG CACGTGCTCTACCTATCCGCGCTCGCCGCGCGCCGCCTCGCCGACGACGCGCTCCACCAC CTCCGCATCATCGCCCGCCCCGGCTCCCCCGTGCCGCCCTCCCCGACGGCCTACCGCGTC GTCGTCGAGTGCCTCGTTGCAGACCACGGCCGGCTCGCGGATGCCGTCAAGCTCAAGGAT GAGATGCTCACCTCTGGATTCGTCGGGCCGGATCCCAAGGTCTACAGCCTTCTCATGGCT GGGTTCGTGGGTGCTGGGGATGGAGCCAAAGCCTTGGAGCTGTACCAAGAACTCAAGGAC AAGGTTGGGGGCGAACCAATTCTGGATGGCATTGTGTACGGGACTCTCATGAAGGCGTAC TTCCTTATGGGAACGGGGGAAAAGGTTATGGAGTGTTACAAAGAGGTGCTGTGTGTTGAA TCTGCGGTGAGGTTTGGGGCCGAGAGCTACAATGAGGTGGTTGATGCGCTTGGGCAGAAT GGGAGGTTGGAGGATGCACTTAAGCTGTTCGACAGAATGCTTGAGGAACATGACCCGCCA CTGCGGATTGCAGTTGATCTGAGAAGCTTCAGGGTGATGGTTGATACCTATTGTGCTGCT GGGAGATTTGAAGATGCAGTTGCAGTGTTCAGAAGAATGGGGGAATGGAAGCTGGTGCCT GATGTGGCATCCTATAATAATTTGATTCGGCACCTGCAGATTAACCAGCTGATAGATAAG GCGGAGGTGCTCTACAATGAGATGTGTGAGAGTGGTGTTGGTGCGGATAAGGAGACATAT TTACTGCTCACGGAAGCATGCTTCAGTGTTGATCGCATCGATGATGGTATCTCTTACTTT GACAAAATGGACGAATTGGAGCTGAAGCCTGATGCAACTGCATATCATAAACTTATTGAT GGCCTGGTGGGTTTCAGTATGGTCGACAAGGCTCAGGAATACTTCAATCAGATGAAGGAG AAGGGAGTTAACCCAAGCATCTCAAGCTACGAGACATTGCTGAAGGCATATATTGCTGCT GACCGGTTGGATGATGCAGTCAATGTTGCAAAAGGTATTCTTTTGAATGAGAAGGTTCTG TTCAGCTATGGAATGAGGGAGCTTTTAGAAGGAGCATTACGTGGAGATGGGAGGGGAAAT GACATCGCCAAGTTATATGAGGATGTGGAGAGGGAAAAGGCTGAAGCGGAAGCCCGGGCT GCAGAAGAGAAGGCGAGGGCAGAGGCTCTTGCCAGAGAAGAGAGGGAGAGGAGGAGAGCA GAGATTGCTGCTAAGGATGAAGCCGCAGCTAAAGCCAGTGCCGCTGCCATTGAAGCTATC CTAGCCCATAAAAGGAAGACAGAGAATGAAGGAGGAGCGCCTGCTCCTGATGCAAACACC CTGGATGGTGGCTTTCTCAGTAAGCTAGGCCTTAAAACAGCCGGAGAAGGGGCACTTCAA GACAATCCAACAGAAAGTGGAGACGATGGAGAAGGGGCACTTCATGGCAATCCAACAGAA AGTGGAGACGATGGAGAGGGGGCACTTCAAGGCAATCCAACGGAAAGAAATGGAGGCAAT GTGCAGCAGGGATATCTGTGA