Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d038699_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:6:162814646:162816895:-1 gene:Zm00001d038699 gene_biotype:protein_coding transcript_biotype:protein_coding description:O-methyltransferase ZRP4

Sequence

ATGGCGCTCACCACGAGCACTAACAACCAAGCCTTGCTTGACGCTCAGCTAGAGCTCTGG
CACACGTCCTTTGCTTTCATCAAGTCCATGGCTCTCAAGTCTGCAGTGGACCTTGGCATC
GCCGACGCCATCCACAGCCACGGTGGCAACGCCACCCTGCCCCAGATAGTTTCCAGGGCC
GCGCTCCACCCGTCCAAGATCCCCTGCCTGCGTCGCCTCATGCGGGTGCTCACAGCCGCC
GGCATCTTCAGCGCCGCCCACCGCTCGCCGGACGACGGCGGCGGCGAGCTCGTCTATGGA
CTCACACCGGCGTCTCAGCTCTTGGTTGGCGGCTCTTCAAGCCTGGCTCCCTTCATGTCC
CTGGTGTTACACCAGGTCTACGTGTCGCCTTTCCTTGGCCTCGGCACATGGTTACAGCAC
GAGCGCTCAGACCCGACCCTGTTTGAGATGACGCATGGGCTCACTGCCTGGGACCTGAAT
GACCACAAGCCAGCTTTCGGCGAGCTCTTCAACCAAGGTATGGTCTGCGACAGCAGCTTC
GTCATGGACATCGTCGTCAAGGAGTGCGGCGACGTCTTCCGGGGTCTAAGCTCCCTTGTC
GACGTCGCCGGAGGGCTTGGCGCGGCGGCACTGGCTATCTCGACCGCGTTCCCGCATGTC
CAGTGCAGTGTCCTGGATCTCCCGCATGTCGCCGCCAATGCTCCCGCTAACACCAGTGTC
AAGTATATTGCTGGCGACATGTTTGAGAGCATTCCACCGGCAGACGCCGTCTTCCTTAAG
TGGGTTTTGCATGACTGGGGCGATGCTGATTGTATCAAGATACTCAAGAACTGTAAGAAA
GCTATACCTTCCAGGGATGCAGGAGGAAAGGTGATAATCGTTGATATGGTTGTTGGAGGC
CAGTCGTCAAACATTAAGCACAAAGAGACTCAGGTCTTGTTTGATCTCTTCATCATGACG
ATCAATGGCGCCGAGCGAGACGAACATGAGTGGAAAAAGATAATTTCCGAAGCTGGATTT
AGCGACTACAAAATCATACCCGTTCTAGGTGTTCGATCCATCATCGAGGTCTACCCATGA

Peptide Sequence

PEP ID

Zm00001d038699_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:6:162814646:162816895:-1 gene:Zm00001d038699 transcript:Zm00001d038699_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:O-methyltransferase ZRP4

Sequence

MALTTSTNNQALLDAQLELWHTSFAFIKSMALKSAVDLGIADAIHSHGGNATLPQIVSRA
ALHPSKIPCLRRLMRVLTAAGIFSAAHRSPDDGGGELVYGLTPASQLLVGGSSSLAPFMS
LVLHQVYVSPFLGLGTWLQHERSDPTLFEMTHGLTAWDLNDHKPAFGELFNQGMVCDSSF
VMDIVVKECGDVFRGLSSLVDVAGGLGAAALAISTAFPHVQCSVLDLPHVAANAPANTSV
KYIAGDMFESIPPADAVFLKWVLHDWGDADCIKILKNCKKAIPSRDAGGKVIIVDMVVGG
QSSNIKHKETQVLFDLFIMTINGAERDEHEWKKIISEAGFSDYKIIPVLGVRSIIEVYP

Transcript Sequence

Transcript ID

Zm00001d038699_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:162814646:162816895:-1 gene:Zm00001d038699 gene_biotype:protein_coding transcript_biotype:protein_coding description:O-methyltransferase ZRP4

Sequence

AATCCAGCACAACAGCATCATGGCGCTCACCACGAGCACTAACAACCAAGCCTTGCTTGA
CGCTCAGCTAGAGCTCTGGCACACGTCCTTTGCTTTCATCAAGTCCATGGCTCTCAAGTC
TGCAGTGGACCTTGGCATCGCCGACGCCATCCACAGCCACGGTGGCAACGCCACCCTGCC
CCAGATAGTTTCCAGGGCCGCGCTCCACCCGTCCAAGATCCCCTGCCTGCGTCGCCTCAT
GCGGGTGCTCACAGCCGCCGGCATCTTCAGCGCCGCCCACCGCTCGCCGGACGACGGCGG
CGGCGAGCTCGTCTATGGACTCACACCGGCGTCTCAGCTCTTGGTTGGCGGCTCTTCAAG
CCTGGCTCCCTTCATGTCCCTGGTGTTACACCAGGTCTACGTGTCGCCTTTCCTTGGCCT
CGGCACATGGTTACAGCACGAGCGCTCAGACCCGACCCTGTTTGAGATGACGCATGGGCT
CACTGCCTGGGACCTGAATGACCACAAGCCAGCTTTCGGCGAGCTCTTCAACCAAGGTAT
GGTCTGCGACAGCAGCTTCGTCATGGACATCGTCGTCAAGGAGTGCGGCGACGTCTTCCG
GGGTCTAAGCTCCCTTGTCGACGTCGCCGGAGGGCTTGGCGCGGCGGCACTGGCTATCTC
GACCGCGTTCCCGCATGTCCAGTGCAGTGTCCTGGATCTCCCGCATGTCGCCGCCAATGC
TCCCGCTAACACCAGTGTCAAGTATATTGCTGGCGACATGTTTGAGAGCATTCCACCGGC
AGACGCCGTCTTCCTTAAGTGGGTTTTGCATGACTGGGGCGATGCTGATTGTATCAAGAT
ACTCAAGAACTGTAAGAAAGCTATACCTTCCAGGGATGCAGGAGGAAAGGTGATAATCGT
TGATATGGTTGTTGGAGGCCAGTCGTCAAACATTAAGCACAAAGAGACTCAGGTCTTGTT
TGATCTCTTCATCATGACGATCAATGGCGCCGAGCGAGACGAACATGAGTGGAAAAAGAT
AATTTCCGAAGCTGGATTTAGCGACTACAAAATCATACCCGTTCTAGGTGTTCGATCCAT
CATCGAGGTCTACCCATGATTATTTGGCGAATACGTGTTTCGTTTTTTTCTGAATAAGTT
GTTTGGTTAACTAGCATGGGACGAGTGTCCATGAGATCATGTGTGATGAAAACTATGTTT
GTGGTGAAGTAAGCACTTTGCAATGATATTAGTACCATAGCATTTGTTCAATCATTGCAT
TGAATTTGAATTAAAATTGAAAGGATCAAGATGCTTAAAAT