Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d038685_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:6:162571774:162577138:1 gene:Zm00001d038685 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable magnesium transporter NIPA6
Sequence

ATGGGGGGCGGCGGCGGATCCTCCGGGCCGGAGCTGTCGACGGACAACATGAAGGGGATA
GTCCTGGCGCTGCTCTCCAGCGGCTTCATCGGCGCCAGCTTCATCATCAAGAAGAAGGGT
CTCCGCCGGGCCGCTGTCGCCTCCGGCGTCCGTGCAGGTGTAGGCGGGTACTCATACCTC
ATGGAGCCCCTGTGGTGGGTTGGCATGATCATTATGATTGTAGGTGAGATTGCCAATTTC
GTGGCATATGCTTTCGCCCCCGCTGTTCTGGTTACTCCCCTTGGAGCACTCAGCATAATT
GTTAGTGCAGTGCTGGCTCATTTCATTCTGAACGAGAGGCTGCATGCCCTCGGGGTGCTC
GGCTGCGTGATGTGCATTGCAGGGTCTGTGGTCATTGTTATCCACGCTCCACAGGAGCAG
GAGATTACTTCAGTTAAGGAAATATGGAACATGGCGACACAACCTGCTTTCTTGTTATAT
GTTGCGTCAGTTATTGTGATTGTTTTTGTCCTGGTGTTCTATTTCTCCCCTCTCTATGGG
CAGTCCAATGTGTTGATCTACACTGCCATTTGCTCTTTGATGGGCTCTCTTTCGGTTATG
AGTGTTAAAGCTCTTGGTACATCACTAAAGCTTACTTTTGAGGGAACAAACCAATTAATA
TATCCAGAGACTTGGTTCTTTATGCTTGTTGTGGCTACTTGTGTGTTGACTCAGATGAAT
TATCTGAACAAGGCACTTGACACGTTCAACACGGCAATTGTATCTCCAATATATTATGTA
ATGTTCACAACTCTTACAATACTTGCCAGCGTCATAATGTTCAAGGATTGGTCTGGTCAA
AGCCCTGGAAGCGTCATTTCTGAAATTTGTGGCTTGGTTGTGGTGTTGTCTGGTACCATT
TTGTTGCATGTGACGAAGGATTATGAAAGGATCCCACAATCAAGAAGTGTTTATGCACCA
TTATCTCCCTCTTTGACAACTAGATTAAATGGAGAATTGTTGAAGCATGTCGTGGATGAG
AGGACTTCGGACGAAGAAAAGGCCTTGAGAAGACAGGAGATGTATTAG

Peptide Sequence

PEP ID

Zm00001d038685_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:6:162571774:162577138:1 gene:Zm00001d038685 transcript:Zm00001d038685_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable magnesium transporter NIPA6
Sequence

MGGGGGSSGPELSTDNMKGIVLALLSSGFIGASFIIKKKGLRRAAVASGVRAGVGGYSYL
MEPLWWVGMIIMIVGEIANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILNERLHALGVL
GCVMCIAGSVVIVIHAPQEQEITSVKEIWNMATQPAFLLYVASVIVIVFVLVFYFSPLYG
QSNVLIYTAICSLMGSLSVMSVKALGTSLKLTFEGTNQLIYPETWFFMLVVATCVLTQMN
YLNKALDTFNTAIVSPIYYVMFTTLTILASVIMFKDWSGQSPGSVISEICGLVVVLSGTI
LLHVTKDYERIPQSRSVYAPLSPSLTTRLNGELLKHVVDERTSDEEKALRRQEMY

Transcript Sequence

Transcript ID

Zm00001d038685_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:162571774:162577138:1 gene:Zm00001d038685 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable magnesium transporter NIPA6
Sequence

ATCAGCGTGTTTTGTTTTGTTTCGTCTCGTCGACCGAGCCGTCCGTCGTCCTCCCTGGCG
GTCTGGCCGCCTCCGCCTTCCTCCCCGTGCGTCTCACCCTTTTCCTCTACAGCTTCCTCT
GCCCAATCAGCTCGTCCTCTCCCCTCCTCTCCCTCCCGTGAACTGCTAAAATCCCTCGCC
AAGCATTTCCGTCGGGTTAGGTGGTAGATAAGCCGAAAATCGAGTGGAAAAGCATCAATC
GAGTGCTGCGCTAGTTGCCTGGTTCGTCCCAACAAATTCCACCGGGAATCAGGGTCGTCC
GGCAGCGGCTGAGGCGTCTGGGTTCTGGAGGAGCGGCCGTCGGTGAGGGGGGATGGGGGG
CGGCGGCGGATCCTCCGGGCCGGAGCTGTCGACGGACAACATGAAGGGGATAGTCCTGGC
GCTGCTCTCCAGCGGCTTCATCGGCGCCAGCTTCATCATCAAGAAGAAGGGTCTCCGCCG
GGCCGCTGTCGCCTCCGGCGTCCGTGCAGGTGTAGGCGGGTACTCATACCTCATGGAGCC
CCTGTGGTGGGTTGGCATGATCATTATGATTGTAGGTGAGATTGCCAATTTCGTGGCATA
TGCTTTCGCCCCCGCTGTTCTGGTTACTCCCCTTGGAGCACTCAGCATAATTGTTAGTGC
AGTGCTGGCTCATTTCATTCTGAACGAGAGGCTGCATGCCCTCGGGGTGCTCGGCTGCGT
GATGTGCATTGCAGGGTCTGTGGTCATTGTTATCCACGCTCCACAGGAGCAGGAGATTAC
TTCAGTTAAGGAAATATGGAACATGGCGACACAACCTGCTTTCTTGTTATATGTTGCGTC
AGTTATTGTGATTGTTTTTGTCCTGGTGTTCTATTTCTCCCCTCTCTATGGGCAGTCCAA
TGTGTTGATCTACACTGCCATTTGCTCTTTGATGGGCTCTCTTTCGGTTATGAGTGTTAA
AGCTCTTGGTACATCACTAAAGCTTACTTTTGAGGGAACAAACCAATTAATATATCCAGA
GACTTGGTTCTTTATGCTTGTTGTGGCTACTTGTGTGTTGACTCAGATGAATTATCTGAA
CAAGGCACTTGACACGTTCAACACGGCAATTGTATCTCCAATATATTATGTAATGTTCAC
AACTCTTACAATACTTGCCAGCGTCATAATGTTCAAGGATTGGTCTGGTCAAAGCCCTGG
AAGCGTCATTTCTGAAATTTGTGGCTTGGTTGTGGTGTTGTCTGGTACCATTTTGTTGCA
TGTGACGAAGGATTATGAAAGGATCCCACAATCAAGAAGTGTTTATGCACCATTATCTCC
CTCTTTGACAACTAGATTAAATGGAGAATTGTTGAAGCATGTCGTGGATGAGAGGACTTC
GGACGAAGAAAAGGCCTTGAGAAGACAGGAGATGTATTAGCGTGCGTCAGAATATCAAAG
GAAATATAGGTTACTCTGATGGATTCTCCGGCAGGGGCTTGTACATGGCGTAGTGATAAC
CTTCCCATAGCGATTGTTGATTCCTCCATTACAGTTTGTTGGTTTGTGTATATAACTGCA
GCAATTTGTGGCTACCGAGTGATTGCAAATCTGCCGAGGTGGTGGAAGGCTGCAGAGTTC
CACCAAAAAGAATCTAAGTCGGGTGCATAGATTCTTATCGAATTCCCTTCTTCCTTTCGT
AACTTCCTCAGTTTTGTCCACGGCATTTGTTCCATGTGAGTTTTAGAGTGAATCACGGAC
CCTATGCAACTGATGTACATTATTATTGTCATAGTGAAGTTCGTGCAACTGTGAATGATG
TACATTATTATTGTCATTGATGCTTCTGCGAAATTCTGGTACCATGGCATCTCTGCCATT
T