Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d038684_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:6:162562591:162568706:1 gene:Zm00001d038684 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence	ATGGTGAAAACACCCAAAACTACACAAGCTTTGGACATGGTCCAACCCACAGCAGTGCCA ACAGCACCTTCCTCAGTCAAAACTACTGCACCAGATCATGTCAGCTTGCCCCCGCCCCCA TTACCTGCTAACCAGCAGAGTGTTGCTCAACTTTCTGCCCCGTTTTCATCTGGCTTGTCT AATGTGGGATCGACCATGGACCCTCCTACTATTTCAGCAAATCCACCACAATCAGCACAA GCAAAAGGATACCTTATCCATCAGATGCCTTCATCAGCTCCTCAGCCATCTCAACATCCA AATATGGCCCTACCTCATGCTCCTCCACAGTATTCCAATGTTCCATCACATATACCTATA GTTCATAGTCAGCCACAGCAACCTTTGCAAAGTCCTGCAATATATAATCAACAGTTGCAA CCACCTTTGCCCCAATTGTCAAGGCCGCCTTTTCCTCATCAGATGCATTCACAAGTACCA AATTCATTTGGGTTGACTCATGCAAATGCTCCGCAGCACATGTTACAACAACCAATGTTT CATCCGGTTGCGAATCCTCAAACTAATTTCCTCCCTGGCCAACCACCATTGCCTAGCCAG CCACCACCACAGCAGCTGTACCAGGTACAATTTGTTGTCTTCTGA

Peptide Sequence

PEP ID	Zm00001d038684_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:6:162562591:162568706:1 gene:Zm00001d038684 transcript:Zm00001d038684_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence	MVKTPKTTQALDMVQPTAVPTAPSSVKTTAPDHVSLPPPPLPANQQSVAQLSAPFSSGLS NVGSTMDPPTISANPPQSAQAKGYLIHQMPSSAPQPSQHPNMALPHAPPQYSNVPSHIPI VHSQPQQPLQSPAIYNQQLQPPLPQLSRPPFPHQMHSQVPNSFGLTHANAPQHMLQQPMF HPVANPQTNFLPGQPPLPSQPPPQQLYQVQFVVF

Transcript Sequence

Transcript ID	Zm00001d038684_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:162562591:162568706:1 gene:Zm00001d038684 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence	GCTCGACAAACGACAGCGGCCTAGCCCCGCCTCCCCGTTATCCGACCTATCCCCAGCGTC GTTGGGTCATCTCCGGCAGCTCCCCCGCTAACACCTCCATGGCGTCGAAGCAGGCGGCGG CTGGCGAAGCCCTTGCGGCCCAAATCAACGGCATGTCCCGCCCTGAGATGTACGACATGA TGTCCAAGATGAAGACCATGATCGACCACGACCAGGAGACGGTGCGCCGCATGCTCGTCG ACAACCCGGACGTCACCCGTGCGCTCTTTCGGGTGAGCTTTCCCGCAGTCTGAGCTCGGT TTATTTTGCGTTCCTTAGTTTGGTGCCTCGGATGCCCCCGCTCGCGGAGACTAGATACCT GTTGGGCTTTAGGGTTTTGTGGGTTGTGGAATCGTATTTGGTTAAGTTGGAAATGATCCG GTTCAGTGGCGGAGCCAGGCTAAAATTGAAGCCTGGGCACCGCTGGTGGGAGGCGAGGGG CGGCAGCACCGCACCTAGACCTGGGGATGCGGACGACCACAGCTGGGTCACATCCCCTCT CCATCGAATAATGATTTTAATTACATCTGATAAATTAAAATGGTGACGACCATGGATCAA TGAACAACTTACTTGATAGTGGTTGTCCCCACCTCTGGTTGGGTTTAATTCTTATCTCCA ACTCACCACCATCAACCAACGCAGAAGGATCGGTCACGCCGAGGAATCTCAGCTTATCCA GTGCATTACTCGCGTTTCAGATTATCAGGAGGTATAGAAATGCAGTTTGTGAATTGCAGC AATTCATAAGAACAAGTCAATTCAACCGTACACACTGAGATGATGACTGACCTTACAAGT TCACAGAGAAATACCTTATTGTGGCTGTACAAACTGTGTACAATTAAGTCCAGCAAGCGG CTAACCTGCAGGGCACAGAGAAATGCTACATAAACAAAGAAGCGTTCAATTGCCGATTCC ATGAAGACAAGCAGAATTCTCTTAATCACGAAACACAAATTTGGCCACAGCAGAGTGCAA CGGCATACTGAATGTGGCACACAATTGACAATTCAAGGGACACAAACACAAATTCATGAA ACGGGTCAATTTCCCTAGCTCACCTTAGCCTGGTACTCGAACTTGCCGGCTGTCTCCTCG CCGGCAGGCTTCTTGGCGAAGGCGAGGTTGCACCTCACCCTGACCATCCTCCGTCTTGCG GCCTCCCATCTCACCCCTACCGCGCACCTCGCGGTGGCGCTCCTGCCCTGCTGCACTAGG GCGGCCCGACAGACCCCAGGACGACGGGCGCGGTTGTAGCGTGGCCACTGACTACCACTG GCGGAGCCAAGCCCGGGCACGTGCCCGGGCAGGCTGGGCTCTGGCTCCGCCGGTGTTCAT GTCCAGTTTTACTACTTCTAGAAAGGCATCTATAGTTGCCAGGCAGATTAGGGAGGGAGA ACAGAGGCCTTTGTGTTCTCTGCTCTTCCAATTGGCTCTGGTCCATGATTAACTTGAAAA AGGGAATTCATGAACACTTCTGTACCAAAAAAATGTCAGTTGCTCTTTGCATCATTCAGA TGGGACTTTTGGAGCACTCATTAGATTTGTATTTTGAGTTTTGAAGTTGAAAAATTATTC TCCGAATCACTTGTTACCATTGCAAGTTTGCAACAATGAGTTCACTTTTCTCTCTGTTCC AAATTATTCTTCACTTTACATTTGTAAGTCAAAACTTTGACCAATTTCATAGAAAAATGC ATCGACATATACAAAATATCGCATTAGTTTCATTAGTTTCTCATGAAATGTTTTTTGATT GTGCATTTATTTGAACTTGCAGATGCTAATATATTTTTTTTTTCTAAAAACTTGGTCAAA ATTAGAGAAGTTTGACTTTAGACAGCCAGCGAACTATAATTTGGAACAAAGGGTGTAGTT GTTTACCTGAGAAAATCTTGGATGAGGACAACTGTGTTTTATGTACTAATAATAGCCAGC AAACTCTATTACCGTTAAAGTCACTATCTGTTGTACGTTGCTATTGTTCTCCAACCGTTT ATTTAAAAGCATTCTTTTTCTAACACCTGTATATACCATTGTTCTCCTGGCATAATATGT CTTGATGTCTAACAGTAAATCTGTTTATTTCTTTAACTAGGTTTGAATTTTCTATACAAC TTCCTTTTTGCAGGCACAAGTGGTCCTTGGAATGGTGAAAACACCCAAAACTACACAAGC TTTGGACATGGTCCAACCCACAGCAGTGCCAACAGCACCTTCCTCAGTCAAAACTACTGC ACCAGATCATGTCAGCTTGCCCCCGCCCCCATTACCTGCTAACCAGCAGAGTGTTGCTCA ACTTTCTGCCCCGTTTTCATCTGGCTTGTCTAATGTGGGATCGACCATGGACCCTCCTAC TATTTCAGCAAATCCACCACAATCAGCACAAGCAAAAGGATACCTTATCCATCAGATGCC TTCATCAGCTCCTCAGCCATCTCAACATCCAAATATGGCCCTACCTCATGCTCCTCCACA GTATTCCAATGTTCCATCACATATACCTATAGTTCATAGTCAGCCACAGCAACCTTTGCA AAGTCCTGCAATATATAATCAACAGTTGCAACCACCTTTGCCCCAATTGTCAAGGCCGCC TTTTCCTCATCAGATGCATTCACAAGTACCAAATTCATTTGGGTTGACTCATGCAAATGC TCCGCAGCACATGTTACAACAACCAATGTTTCATCCGGTTGCGAATCCTCAAACTAATTT CCTCCCTGGCCAACCACCATTGCCTAGCCAGCCACCACCACAGCAGCTGTACCAGGTACA ATTTGTTGTCTTCTGAAATATATCATTATATTCCATTGGAGTTGCTGTATTTGCTTTCCA ATTCCAAAGAAGTTAATATGAGTATTTTCACAATTGTTGTCATCACAAGAGTTCTTGGTT TGGAATGACCAAGTTTCATGTTGGGTCTGAAGTTCTGATATATTTGCCTAGTTATATGTG CTGATCATTTTTAAATTTTCAGTATTTAGTAACATATGATCGAAATGTCATTCAGATTTT TTTACCTAATCAAATTGGCACCCATATGGACCTGTTACATGATTCTTGTTACGAAATGAG CTACATATTTGCTTAGCTAGGTTCTACTGATGTTTCCTTTGTTCTAAGTATCACCTGGCT TTTCTATCCTGATTATTGGTGCATATAGAGTTCAAGTTTTGCTATTGTTTTTAGGCACAT GGCACTACTCTATTCCTAAGGGCATGAATACAAAACTTATACTTTACATTATCAACTTTT ATATGATTGTTCCTTTTCATGTGTTGACAATTTCCAATCATGATATAGCAATGCACCATA GTTCTTGTGCCCCAGGAGCATGAAAAATACCACAAGTACATGAAAAGTTATGAATAAAAA CCTAGTGAATTTCACAAAACGCTAGGTACTTTTGTTTCTTGAACTCATCTAGATGGAAAA TGAAGAAAACCTCTCTTGTCGCCTCATTAGTGAATGGGACTTGTGATGTACTGATATTGA TGGTAGAACCCTTTGTAGAATAAAGATTGACATGGATTCCCTTTTCCATTTGAAGTTTGT TGACCTGATTGTTTCTCTTGGGTGATCTCAATTTGATCACATGTTCTGCAATAAGAAAAA GGGCAAGGGTTGGATTCTTGGAGGGTATGATAGAAAGGGATGATCAGGTTTTACTGGAAA CTTAAGTATAAAAACATTAACATTGCAAATTTGTATCTGATGATGAAGAATGGTGATGAA AGCATCAGTATCAAGGGCAATGGGAAAATGACTGGCCTTAATGATGTGGGTCATAATGAG CTATCTGTAGGGAAAATGTCTTCAAGCTTGGGCTCTTTTGGAACAAAGGAAAAATTCCTG AATCCTGCGTTTTCCCTGTGTTTTTGAACTAATTCTCGTGAAATTCCTATACTATTCCTC TGAAATTCCTAGGTTCCAAAAGTGCAGGGTGAGGGCCAAATAACAGATGATCTGTAGTTT TTCGCCGTGTTGCACTCAGATGGGTGATGGAGCAAAAACTATGGTTTTGTGTCGTACACA TAAGCTGTTGTGTTGCAATATCACCAGTACATGTGTCTTTGTGTTGCTCAAAATAAATCT GGTTGTCTCCTTTCCGTCTTTCGGAGGGAATGTCCGTACACAGTTGACAATTATTCAATG CTTGTGAAAATAAATGTCCTACGAGTCTCATTTTCATTGTCCTAAGAAGTGTTTATGGCT TTCCCAGTATAATTGGTTCTGTAAGAATTGCTAGACTGCTAGATATCTGTTTTCCTTTTT GATTTTTAGTCACCATTATAGTTAGGGATGAAAGTGGATGTCCAAATTGTTAGGGCAAAT TTAATATTTTACAATAGATATGTATGAAATTTGATGCTGATGTTTTTTATGTTTTCAAGC ACATTATTACAAAAAGAATACAATTTTGCATAAATTGTTTTATGCATTATTTGCTCCCTA CAACAAAAAAGTGAAAAAAATATCCGTATCTATATCTGAATTTTATATCTATCATTTGAT AAGATATATAATAAGTTTGAAGTTTACCTTTTAGAATCTTTGCAAGCTCAAGGTTAAAAA CAAGAATACAGATTTGCATAGAGGATGCTATATTCTATTTATTCGCAATCAAAGGAAAAA GACCAAAAATTTGAGATCCGAATAAGTATCCGTTTTCATTCCTAATTATAGTATCATCTA AGATGTTTAGAAATTTTGTGGCTGGTGTATAGAACTGAGATAAGCGTTCTTGGAAGATGT CAACCATTTGTGGACATATATCTCCATGAACATGGTGTTTATGTTTTCTTTCAAAAATGG GAAAATGAGGAAGCTCCAACAAGCTTCAACTGTTTATGGTCCAAATGAAGCACATGCAAT TTGTGACAAAGATAGTCTATGAGTAGTTCAGTTTTTCATGTGATTTGGTGACCATGGTTC AGTGCATAACCCTGGTAATCTATATGCTCAACAGGCTAGTTCACACTACAATACACAAAA TACGACTCCAATGCAAGTTGATAGGGGCGCTCCCTGGGGGCGGGCCCCTGATGCTCCCAC TCCTGGCTCTCATTTCCCTGGACAATTACCCGGGTTGCCCGGACAAATGACCCAAGGAAT TGGTGGTATCCAGGCAGGCCAAGCACCACTGACACCTGAGATGGAAAAGATGCTAGTCCA ACAAGTCCTGGGCATGTCCGCTGAGCAGATTAACATGTTGCCTCCAGAACAACGGCAACA GGTTCTTCAACTACGAGACATGCTACGGCAATGATAGATCGTCAGTTGACTGGGTGGAGA AGTTTCAGTTCACTGCAGCAGGGATCCCGAGTGTGGGTGCCTGTTCGTTTTAGCCTTTTG TATCACCTGATTGACATCCCGACTAGTCTGCAGCCTACCTTGGATATGCGATTGTAGAAT GGTAGTCGTTGTCGTCATTTATAGAAATGCTTGGGCAATATGTTTTCCGAAGGAC