Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d038682_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:6:162456466:162458595:1 gene:Zm00001d038682 gene_biotype:protein_coding transcript_biotype:protein_coding description:PLASMODESMATA CALLOSE-BINDING PROTEIN 2
Sequence

ATGGCGGTTCCCCTGCTTCTCCTCCTCCTGCTGTCCGTGTTCACAGCCTCAGATGCGGCG
TTCTGCGTGTGCAAGCCGGGCATGTCCGACCAGATGATGCAGTCGGCCATCGACTACGCC
TGCAGCAAGGGGGCCGACTGCGCCTCCACCACCAAGGGCGCGCCGTGCTACGGCAACGGC
AACAAGGTGGCCGTCTGCTCCTACATCTGCAACAGCTACTACCAGAGCCGCAGCGGCACG
GGCGCCGGCGCTGGCACGGGCGCGGGCATGGGTGCCGGCGCTGGAACCGGAGCAGGCACG
GGCATGGGCGCCGGGACGGGGACCAGCACCGGAGCTGGCGCTGGCACCGGCACCGGCGCC
GGGATCACGACCCCCGGGGCCCTGAGCCCGCCGTTCGGCGGCACGGGCGCCTACGGCCCG
TCAGGAGCAGGCAGCACTGACTACAACGACGCTGCGGCGCGGCGCGTCTCCAGGCTGCAC
GTGGTGGCCGCCCTCGTCTTCGGCCTCGCCGCCGCCGCCGCACCTCTCCTCCGCTAG

Peptide Sequence

PEP ID

Zm00001d038682_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:6:162456466:162458595:1 gene:Zm00001d038682 transcript:Zm00001d038682_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:PLASMODESMATA CALLOSE-BINDING PROTEIN 2
Sequence

MAVPLLLLLLLSVFTASDAAFCVCKPGMSDQMMQSAIDYACSKGADCASTTKGAPCYGNG
NKVAVCSYICNSYYQSRSGTGAGAGTGAGMGAGAGTGAGTGMGAGTGTSTGAGAGTGTGA
GITTPGALSPPFGGTGAYGPSGAGSTDYNDAAARRVSRLHVVAALVFGLAAAAAPLLR

Transcript Sequence

Transcript ID

Zm00001d038682_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:162456466:162458595:1 gene:Zm00001d038682 gene_biotype:protein_coding transcript_biotype:protein_coding description:PLASMODESMATA CALLOSE-BINDING PROTEIN 2
Sequence

AGACCACTCCCCAGTTCAGTCCCCACACCGAGCTCTGCCCATCGCGCGCACACACACACT
CTCTCTCCCACCGTTCACGGTCCAGTCCAGAGAGCTCAAGAGCTCCTGCAGCCATGGCGG
TTCCCCTGCTTCTCCTCCTCCTGCTGTCCGTGTTCACAGCCTCAGATGCGGCGTTCTGCG
TGTGCAAGCCGGGCATGTCCGACCAGATGATGCAGTCGGCCATCGACTACGCCTGCAGCA
AGGGGGCCGACTGCGCCTCCACCACCAAGGGCGCGCCGTGCTACGGCAACGGCAACAAGG
TGGCCGTCTGCTCCTACATCTGCAACAGCTACTACCAGAGCCGCAGCGGCACGGGCGCCG
GCGCTGGCACGGGCGCGGGCATGGGTGCCGGCGCTGGAACCGGAGCAGGCACGGGCATGG
GCGCCGGGACGGGGACCAGCACCGGAGCTGGCGCTGGCACCGGCACCGGCGCCGGGATCA
CGACCCCCGGGGCCCTGAGCCCGCCGTTCGGCGGCACGGGCGCCTACGGCCCGTCAGGAG
CAGGCAGCACTGACTACAACGACGCTGCGGCGCGGCGCGTCTCCAGGCTGCACGTGGTGG
CCGCCCTCGTCTTCGGCCTCGCCGCCGCCGCCGCACCTCTCCTCCGCTAGGAGGTGTAAG
TGGGAGGGAGGGGGGCGGGCACGACACGCGCAGTGGATCCCGCTGTCTGGCGTGCGTGCG
TGCCTGCGCTGGGTTTTGATCGATCAGCCGTCGTCAGCGTAGTAGCAGCACGGGGTTTAC
TGTTATTCAACTGACCCTCTTGTCCTTCCCCGTGCTAGTGGTGGTGGTGGCTGCCATGTG
CCATGTGGTTTGGTGCTCTGTACTAGTGGTAGTAGAGATCCTAGGGATTCTTTTGGTAGT
TCCGGACATACGTGTCGACGTGTTCTTCAGTCGTTTTTCTTTCTTTCTGTTTTGTTCCTT
ATGCCTCCGTTGTTGTGTTAGGCTGTGTTTTTACTAGAACTATGCTAGTGTCTGGTGGCG
GCCGCTTTCCAT