Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d038655_T041
CDS Infomation

cds chromosome:B73_RefGen_v4:6:161929703:161936195:1 gene:Zm00001d038655 gene_biotype:protein_coding transcript_biotype:protein_coding description:TRAF-like superfamily protein
Sequence

ATGCTCAGATTCTTAGTTAATGTCAACCGATTCATTTCTGTAACTATGTTCTGTTTTGCA
TTTTTTTTCCAGAAAAACATTGAGGGGCAGAAACTTCTCAAAGCTCATTTTGAAGCTAGG
GACACAAAAGTGAAGGTAGAAGAATCTTCTGACTCATCTAATTCTTTGGATAGGCCACCT
GATGTTCCAGAGAGCTCGATGCATTCTTCAGAAGATACAGTTGATCTTAAAGTTAATGGA
ACACCAAATAAGGATGCCTCTGTGGTCAACCCTGTCCTGGAGGAATCTGTTTCAGGCATA
CCAGTCACTGCAAAGAATGAATCCTTGCCTTCTGCCAGAACAAAAGAAGGCCCAGTTTCA
AACAAAGATAACGCATCAAGTTTGAAAATGAAAACCATGGCATCTTGCTTGAAATTGCAT
CCAGCTGATGTGGATAAAGATGCCCCTTTTCCTTCTAAATCACCACGAATCAATAGGGCT
GCTCCAGTTCCCTCGAAGTTACCTTCGGCTGATAAAGCTACTCCAGTTCTTCCAAAATCA
TCTCTGTCAGTAAACAAAGCAGCTCTGGTCCGTCCCAAATCTCCAGCAGTTGACAAAGCA
ACTCCAGTTTGTCCTGAATCTCCAGCAGTTGACAAAGTAACTCCAGTTCGTCCCAGATCT
CCAGCAGTTGACAAAGCAACTCCAGTTCGTTCTCAATCTCCAGCAGTTGACAAAGCTACT
CATGTTTGCCCTCAATCTCCATCAGTTGACAAGGCAACTCCATCCATTGACAAAGCAACT
CCAGTTCGCCCAAAATCTCCAGCCATAGATAAAGTAACTCCAATTCCTCCCAAATCTCCA
CCAGTTGACAAAGCCTCTCCAGCACCACCAAAATCACTATCAGGTGCTAAAGATGTGCCT
GTTCCTTCAAGGTCGCTGCAAATTGATAGGTTCATTCCAGCCCCCCCAAGATTATCGCAA
GTTGATAAAGCTGCTCTGCCTTCTTCAGAACAGCCACATATATCTCCAGCTACTAATTCT
GAAGCCCAAGGGGCAACTACTTCTAGGAAGGTCACAGCCAGCTCAGTTTTGGAGGTTGCT
GCAGCATCGAGGCCTTCAAGTGCTCCTGTGTTACCCACACCAAGATCAACTGCACCAGTT
GCTTCACATATTCAAACTTCCACGTTGCTTTCCCGCTCGATGAGTGAGGCAGCTGGGAGA
AGGTCAGTAAATGATCCTTCCTTTTCTGCCCCATCTTATACTCCCCAGACCTACCGAAAT
GCAATAATTGGTAAGACTGGTCTGGCTACTACCTCTGCAAACCTTGCATATCAGTCCTAT
TCTCTGGGTCAAGATACTGCTCCTTCACAGCCTCTATCAGCATATGCATCAAGCACAGCA
GTCATGATGCCTCCTGCTGGAAGATCTGATCAATCATCAGCTAGGCATGGATTCAAGTCT
GGGTCTGGTAAGCTAGAAGCACATGACAGCTGGCAGCAGTGGAAAGGTGATAATAATGTT
GATATGCATCTCTGGAGGGATCACACTACCTATCAACAAATGACCAGGGGTCAAGCGTAT
GACCAATCTCGGAGGGACGATACTTATCAGCAAACATGCAGCAGAGGAACAGAAAAGTTC
AGCAGGCACGCAGGACTGCAAGCTAGGCAGTTCCAAACCGAGACACCCGCCAGCCATGTC
TGGCACCAACAACAGGGGCAAGTGGCAGAAGAGTTTCCACACCTTGACATCATAAACGAT
TTGCTTGAGGAGGACCAGATCAACGGCAGTATACCAGAGTCATTTCATCAAGATTACAAT
GTGTTTGGCCTGCCATTTTCACCAAGAGGAAACGTGTCAGATATGGGAATGGCTTCTGTT
AGAAGTCCTGCTCGGTTCAATTCAACCAAGTATGAGTATGACGGTGGATTCTCGGGGGCT
TATGACATAAATGCGGTCAATGGGTTGAGGGAACGGCAGTTTCCCTCGTTGGATAGTTAC
TCTAATGGCCTGTCTGACGTGAGTGCATCAAAGCCTTGGCTGAATGGCTCTCCCAGTCCA
TCGGTGATGAGCCTTGGGGTTAACACAAATGGATACCACCCCCAGGTTGCGGACTACCCC
AGTCTGGGAAATGGGGTGAACGGAGTCTCCTTGTGGCGCCGCCATGCTAACGGGCGCTGG
TAA

Peptide Sequence

PEP ID

Zm00001d038655_P041
PEP Infomation

pep chromosome:B73_RefGen_v4:6:161929703:161936195:1 gene:Zm00001d038655 transcript:Zm00001d038655_T041 gene_biotype:protein_coding transcript_biotype:protein_coding description:TRAF-like superfamily protein
Sequence

MLRFLVNVNRFISVTMFCFAFFFQKNIEGQKLLKAHFEARDTKVKVEESSDSSNSLDRPP
DVPESSMHSSEDTVDLKVNGTPNKDASVVNPVLEESVSGIPVTAKNESLPSARTKEGPVS
NKDNASSLKMKTMASCLKLHPADVDKDAPFPSKSPRINRAAPVPSKLPSADKATPVLPKS
SLSVNKAALVRPKSPAVDKATPVCPESPAVDKVTPVRPRSPAVDKATPVRSQSPAVDKAT
HVCPQSPSVDKATPSIDKATPVRPKSPAIDKVTPIPPKSPPVDKASPAPPKSLSGAKDVP
VPSRSLQIDRFIPAPPRLSQVDKAALPSSEQPHISPATNSEAQGATTSRKVTASSVLEVA
AASRPSSAPVLPTPRSTAPVASHIQTSTLLSRSMSEAAGRRSVNDPSFSAPSYTPQTYRN
AIIGKTGLATTSANLAYQSYSLGQDTAPSQPLSAYASSTAVMMPPAGRSDQSSARHGFKS
GSGKLEAHDSWQQWKGDNNVDMHLWRDHTTYQQMTRGQAYDQSRRDDTYQQTCSRGTEKF
SRHAGLQARQFQTETPASHVWHQQQGQVAEEFPHLDIINDLLEEDQINGSIPESFHQDYN
VFGLPFSPRGNVSDMGMASVRSPARFNSTKYEYDGGFSGAYDINAVNGLRERQFPSLDSY
SNGLSDVSASKPWLNGSPSPSVMSLGVNTNGYHPQVADYPSLGNGVNGVSLWRRHANGRW

Transcript Sequence

Transcript ID

Zm00001d038655_T041
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:161929703:161936195:1 gene:Zm00001d038655 gene_biotype:protein_coding transcript_biotype:protein_coding description:TRAF-like superfamily protein
Sequence

GAAGATACTAGAGACATTTGTGCTATCTCATATATTTAGCGGAATTGAAGTTGCATACCA
AGAAGCTGTTGCTTTGAAAAGGCAAGAAGAGCTTATTCGTGAAGAGGAGGAGGAGGCTGG
ACTTCTTGAACATCAGATGAAGGGGAAGCGTGGTGGTGGTGCAAATGAAAAGGACAAGCG
TGCCAAGAAAAAGCAGACCAAGCAAAAGAAGAACAACCGTAAGGCTAAAGACAAGGAAAG
AGATGTGAAATGTGAGGTTAAAATTCTGGAAAGGCTTCATGATGAAACTGTTATTGATAA
CAGTGATGGCTTACCAGCTAAGGTGGAAGTGATAGCCAAGGTTGATGCCTTGGAAGAAGG
TTCTTCAGATGGGTCAGACATGCCAAATAGAGGAAAAAATCAGTGTAACAAGGGCTTAAG
CATTAGTCTTGCCAAAGAAGGTGATGGTCTTCCCTCCACCTCTAGTGTTACAGGTGGTTC
AGGCCGCAATAGTTCTGGCTGCTGCACAGCTCCAAAACTGGATCAGGATACTGTTCTGCT
TACCTTGAGAGATAAACTTCGTAAGCTAGGGCAGCGTCTGCAAGAGGTGAATTTAGTTAT
TTCAAAAAAGTTGTTTTTGTTTTTATCATGAAATTTATAGTTTGGCTACTACATTTTCTG
CCTACGAACAACTGAAGGATCTGAATTATGATTGTTGGTTTTGTATGTGATGCATATCTT
AAACATGCCCTCAGATTCTAAATAAGTCCTTTTATGTTTGTTGGAAGTCACTATTTCTTA
TCTTTGACTATCAGTAGCTAAAAGTTCATATAGATTACCATGGTTAATGCTGCTAGATTC
ATCATGAAAGATGCTTCAACACTATTTAACTCTTTCTATATGAAACAATATGTTCTTTAT
GGTGTCATCAGTCAGAGTGCCGTATTAAGACCATATCAAAACTCTAATGAACCTATATTT
GGAATCAAAGGGAGTGACAATTATACTTGCCACCCATGTTGCCTCGTGGTAGAGGACATA
TGATGCTGTGATCACTGGTTCAAGACCTTTATCTTTCAAATTTTCTCAAATGCAAAGGAA
AGTCGTGTATCTACCTTTCAATCATTGATACATAGTTCCTTCTGTGTATCATTATGTTTT
TAAGAAATTGACCTAACTCATTTGTTGGGAGGTCTGGATGTACATTCTCAACACCCAGGT
TTGAGTCCTCTTTGACTCGAATTTAGGTGCTTATTTCTTCTTATTCAACATGCCACCTAG
TTCCTTCTAAAAAAACTCGACCTGAGGGTAATACAGCCCCGCAGGCATTATATTAAGAGA
AGTCCTTCTCACACAGATCGAGAAAACCTCCAAGTCCCTGTCCCACCCATACATAGAGGC
ATCGTAGCCCATGTGAGAAAGACCACGACCAGGGCCGGGACCTTAATCTTGTGCTTTGGC
GTAGGACATACGAGGGGATTTTTTAAACCCCAGCCTGAAGTTCGCTCCCACGGGGAGTTG
AACTCAGAACCTGAGTGCTACTTAGACCACCTAACCAACTCAGCTAGAGTCCATTTCGTC
ACCTAGTTCCTTCTAGGCGATAAAGTTTTCTTTTCATCATATTTGAATGGTGAATAATAT
TATCTTTTGATTGATTCATGAACCGGAGATAATCACAATATCTTGATACATAGTTCCTTC
TGTGTATCATTATGTTTTTAAGAAATTGACCTAACTCATTTGTTGGGAGGTCTGGATGTA
CATTCTCAACACCCAGGTTTGAGTCCTCTTTGACTCGAATTTAGGTGCTTATTTCTTCTT
ATTCAACATGTCACCTAGTTTCTTCTAAAAAAACTCGACCTGAGGGTAATACAGCCCCGC
AGGCATTATATTAAGAGAAGTCCTTCTCACACAGATCGAGAAAACCTCCAAGTCCCTGTC
CCACCCATACATAGAGGCATCGTAGCCCATGTGAGAAAGACCACGACCAGGGCCAGGACC
TTAATCTTGTGCTTTGGCGTAGGACATACGAGGGTTTTTTTTAAACCCCAGCCTGAAGTT
CGCTCCCACGGGGAGTTGAACTCAGAACCTGAGTGCTACTTAGACCACCTAACCAACTCA
GCTAGAGTCCATTTCGTCACCTAGTTCCTTCTAGGCGATAAAGTTTTCTTTTCATCATAT
TTGAATGGTGAATAATATTATCTTTTGATTGATTCATGAACCGGAGATAATCACAATATC
TTGATGCAAAACCTGACAAATTTTTTCCTTACATTTTTGTGCTGTACTGTTTGGTGACTG
GCTATATCAATGGATTGGTATGATAATGCAACCCCTTTTTCCCTGTGAAACACATGTACC
AGTCACTCGATTGGATGTGTTGACTGGTTCTTATTTTCCAGCTTACATAAGGAATGCTCA
GATTCTTAGTTAATGTCAACCGATTCATTTCTGTAACTATGTTCTGTTTTGCATTTTTTT
TCCAGAAAAACATTGAGGGGCAGAAACTTCTCAAAGCTCATTTTGAAGCTAGGGACACAA
AAGTGAAGGTAGAAGAATCTTCTGACTCATCTAATTCTTTGGATAGGCCACCTGATGTTC
CAGAGAGCTCGATGCATTCTTCAGAAGATACAGTTGATCTTAAAGTTAATGGAACACCAA
ATAAGGATGCCTCTGTGGTCAACCCTGTCCTGGAGGAATCTGTTTCAGGCATACCAGTCA
CTGCAAAGAATGAATCCTTGCCTTCTGCCAGAACAAAAGAAGGCCCAGTTTCAAACAAAG
ATAACGCATCAAGTTTGAAAATGAAAACCATGGCATCTTGCTTGAAATTGCATCCAGCTG
ATGTGGATAAAGATGCCCCTTTTCCTTCTAAATCACCACGAATCAATAGGGCTGCTCCAG
TTCCCTCGAAGTTACCTTCGGCTGATAAAGCTACTCCAGTTCTTCCAAAATCATCTCTGT
CAGTAAACAAAGCAGCTCTGGTCCGTCCCAAATCTCCAGCAGTTGACAAAGCAACTCCAG
TTTGTCCTGAATCTCCAGCAGTTGACAAAGTAACTCCAGTTCGTCCCAGATCTCCAGCAG
TTGACAAAGCAACTCCAGTTCGTTCTCAATCTCCAGCAGTTGACAAAGCTACTCATGTTT
GCCCTCAATCTCCATCAGTTGACAAGGCAACTCCATCCATTGACAAAGCAACTCCAGTTC
GCCCAAAATCTCCAGCCATAGATAAAGTAACTCCAATTCCTCCCAAATCTCCACCAGTTG
ACAAAGCCTCTCCAGCACCACCAAAATCACTATCAGGTGCTAAAGATGTGCCTGTTCCTT
CAAGGTCGCTGCAAATTGATAGGTTCATTCCAGCCCCCCCAAGATTATCGCAAGTTGATA
AAGCTGCTCTGCCTTCTTCAGAACAGCCACATATATCTCCAGCTACTAATTCTGAAGCCC
AAGGGGCAACTACTTCTAGGAAGGTCACAGCCAGCTCAGTTTTGGAGGTTGCTGCAGCAT
CGAGGCCTTCAAGTGCTCCTGTGTTACCCACACCAAGATCAACTGCACCAGTTGCTTCAC
ATATTCAAACTTCCACGTTGCTTTCCCGCTCGATGAGTGAGGCAGCTGGGAGAAGGTCAG
TAAATGATCCTTCCTTTTCTGCCCCATCTTATACTCCCCAGACCTACCGAAATGCAATAA
TTGGTAAGACTGGTCTGGCTACTACCTCTGCAAACCTTGCATATCAGTCCTATTCTCTGG
GTCAAGATACTGCTCCTTCACAGCCTCTATCAGCATATGCATCAAGCACAGCAGTCATGA
TGCCTCCTGCTGGAAGATCTGATCAATCATCAGCTAGGCATGGATTCAAGTCTGGGTCTG
GTAAGCTAGAAGCACATGACAGCTGGCAGCAGTGGAAAGGTGATAATAATGTTGATATGC
ATCTCTGGAGGGATCACACTACCTATCAACAAATGACCAGGGGTCAAGCGTATGACCAAT
CTCGGAGGGACGATACTTATCAGCAAACATGCAGCAGAGGAACAGAAAAGTTCAGCAGGC
ACGCAGGACTGCAAGCTAGGCAGTTCCAAACCGAGACACCCGCCAGCCATGTCTGGCACC
AACAACAGGGGCAAGTGGCAGAAGAGTTTCCACACCTTGACATCATAAACGATTTGCTTG
AGGAGGACCAGATCAACGGCAGTATACCAGAGTCATTTCATCAAGATTACAATGTGTTTG
GCCTGCCATTTTCACCAAGAGGAAACGTGTCAGATATGGGAATGGCTTCTGTTAGAAGTC
CTGCTCGGTTCAATTCAACCAAGTATGAGTATGACGGTGGATTCTCGGGGGCTTATGACA
TAAATGCGGTCAATGGGTTGAGGGAACGGCAGTTTCCCTCGTTGGATAGTTACTCTAATG
GCCTGTCTGACGTGAGTGCATCAAAGCCTTGGCTGAATGGCTCTCCCAGTCCATCGGTGA
TGAGCCTTGGGGTTAACACAAATGGATACCACCCCCAGGTTGCGGACTACCCCAGTCTGG
GAAATGGGGTGAACGGAGTCTCCTTGTGGCGCCGCCATGCTAACGGGCGCTGGTAATGCG
AGGTGCCTGTATACAATCATACAGATGGAATAATGTTTGTTGTAACAAATGGTTTCGGGC
CTGAGCTGATGTGCCATGTAATTAAAAGTTTTAAGT