Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d038630_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:6:161315164:161316342:-1 gene:Zm00001d038630 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sphinganine C4-monooxygenase 1
Sequence	ATGGAGCAACTACTACTCTCTGATGAGGGTCTGGCCGTCGTTGTGCCTATCCTGGTGTAC TGGGCGTATTGTGGCCTGCACGTAGTGCTAGGCCAGTCCATGTATATGGACAGATACAGG CTGCACCCAAGCGCCCATGAAGATAGCAAGAACTATGTGTCGAAACGACAGGTCATCGGC AACGTCCTCAAGCAGCAGCTCGTGCAGGTTACCATCGTTGCCATGGTGTTCAAGCTCACA GGAGGGAGGAGCACCAGCAGTACGACGACCGAAGCATCGTCGTACCTGAAGCTAGCCTGC CAGATCTTGGTGGCCATGGTCTTCTTCGACGTGTGGCAGTACGCGTGCCACCGGACCATG CACGCCAGCAGGTTCCTCTACCGGAACCTGCACTCGTGGCACCACCGCCTCGTGGTGCCC TACGCCTTCGGCGCGCTGTACGGGCACCCGCTCGAGGGCTTCGTCGCGGACACCGTCGGC GGCACGGCGGCCTTCCTGGTGTCCGGCATGTCGCCGCGGGCCTCCGTCTTCTTCTTCTCG CTCTGCACCGTCAAGGTCGTCGACAACCACTGCGGCCTGTCGCTGCTGCCCTGCTGGGAT CGCCTGGGCCTCTGGAACAGCGCGGCGTACCACGACGTGCACCACCAGCTGCGTGGCGGC CAGTACAACTTCTCTCAGCTCTTCTTCGTCGTCTGGGACAGGGTGTTTGGGACGCACATG CCATTCGTGATCGAGGACAGAGCCGGCGGAGGAGGAATGCTCCAGGTCCGAGCACCCGGC CTTGACTACAGGAGCAAGTAA

Peptide Sequence

PEP ID	Zm00001d038630_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:6:161315164:161316342:-1 gene:Zm00001d038630 transcript:Zm00001d038630_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sphinganine C4-monooxygenase 1
Sequence	MEQLLLSDEGLAVVVPILVYWAYCGLHVVLGQSMYMDRYRLHPSAHEDSKNYVSKRQVIG NVLKQQLVQVTIVAMVFKLTGGRSTSSTTTEASSYLKLACQILVAMVFFDVWQYACHRTM HASRFLYRNLHSWHHRLVVPYAFGALYGHPLEGFVADTVGGTAAFLVSGMSPRASVFFFS LCTVKVVDNHCGLSLLPCWDRLGLWNSAAYHDVHHQLRGGQYNFSQLFFVVWDRVFGTHM PFVIEDRAGGGGMLQVRAPGLDYRSK

Transcript Sequence

Transcript ID	Zm00001d038630_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:161315164:161316342:-1 gene:Zm00001d038630 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sphinganine C4-monooxygenase 1
Sequence	CAACAACAGCACCGTACCTAGCTAGCTACGATCGACCACACAGCTAGCTAGCTAACACAT TCATCGATCGATCGACGATCCAACAAATCCGTCAAATATTAATGGAGCAACTACTACTCT CTGATGAGGGTCTGGCCGTCGTTGTGCCTATCCTGGTGTACTGGGCGTATTGTGGCCTGC ACGTAGTGCTAGGCCAGTCCATGTATATGGACAGATACAGGCTGCACCCAAGCGCCCATG AAGATAGCAAGAACTATGTGTCGAAACGACAGGTCATCGGCAACGTCCTCAAGCAGCAGC TCGTGCAGGTTACCATCGTTGCCATGGTGTTCAAGCTCACAGGAGGGAGGAGCACCAGCA GTACGACGACCGAAGCATCGTCGTACCTGAAGCTAGCCTGCCAGATCTTGGTGGCCATGG TCTTCTTCGACGTGTGGCAGTACGCGTGCCACCGGACCATGCACGCCAGCAGGTTCCTCT ACCGGAACCTGCACTCGTGGCACCACCGCCTCGTGGTGCCCTACGCCTTCGGCGCGCTGT ACGGGCACCCGCTCGAGGGCTTCGTCGCGGACACCGTCGGCGGCACGGCGGCCTTCCTGG TGTCCGGCATGTCGCCGCGGGCCTCCGTCTTCTTCTTCTCGCTCTGCACCGTCAAGGTCG TCGACAACCACTGCGGCCTGTCGCTGCTGCCCTGCTGGGATCGCCTGGGCCTCTGGAACA GCGCGGCGTACCACGACGTGCACCACCAGCTGCGTGGCGGCCAGTACAACTTCTCTCAGC TCTTCTTCGTCGTCTGGGACAGGGTGTTTGGGACGCACATGCCATTCGTGATCGAGGACA GAGCCGGCGGAGGAGGAATGCTCCAGGTCCGAGCACCCGGCCTTGACTACAGGAGCAAGT AAGCTACATATATAGCAGTCGAATTTTGTCATGTAAATTCGTTTCGGCCGTCGTTATTGC ATGATTCTTGTAATAATAAAGTGGTTTGATTATTCCTCTTTTAATTTGAGGGACGACGAT GAAGCAGCCACATGTCTTTACATTGTTATATAAATTTATAATTGTGTCGTCA