Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d038599_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:6:160734732:160736672:1 gene:Zm00001d038599 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peroxidase 1

Sequence

ATGTGGAGGGAGCGGCGGCGGGCGCTGCTCCTGCTGGTGGCCGGCGCGGCGCTGGGACTG
ATCGGTGCCGCGCTCGCGAGCGCGCCGCCGGAGGCCGCGCTGAAGGTCGGGTTCTACCAT
GCGACGTGCCCCATCGCGGAGGACGTGGTCCTCGCCGAGATGAGGCTCATCCTCATGGAG
GACGCCACGGTCGCGCCGTCCCTGCTCCGGATGCACTACCACGACTGCTTCGTGCAGGGC
TGCGACGGGTCGATCATGCTCCAGTCGAGGAAGAAGGGGAAGGCGGAGCGGGACGCGCTG
CCCAACCGTAGCATGCGAGGGTTCGACGCCATCGAGCGGATCAAGGCCCGGCTCGAGACC
GTCTGCCCGCTCACCGTCTCCTGCGCCGACATCATCGCCATGGCGGCGAGGGACGCCGTC
TACCTGAGCCACGGGCCGTGGTACGACGTGGAGACCGGGCGGCGCGACGGCAACGTCACC
GTGGCCGAGTACGTCGACAACGACCTGCCGCCGCCGGACTCCAACATTGTCGACGTGAAG
ACCTTCTTCAGCGTCAAGTCGCTTAACTCGAAGGACATCGCCGTCCTCTTCGGGTGCCAC
AGCATCGGGACCTCCCACTGCGGCCCGATCCAGAAGCGGCTCTACAACTTCACCGGCAAC
ATGGACGGCCAGGACCCGTCGCTGGACCCGGCCTACGCCGCCGAGCTCAGGAAGCTCTGC
CCGCCTCCCAGACCCGGCGACGATGCTAGGAAGGTCAAGGTGCCTTTGGACCCCGGCAGC
AACTACACCTTCGACCTGAGCTACTACCGCCACGTGCTCGCCACGGGCGGGCTGTTCCAG
TCCGACGGCAGCCTCCTGCACGACCCCGTCACCAGAGGCTACGTCGAGAAGGTGGCCAAG
GCGTCGTCGCCCGACGAGTACTACGCGGACTTCGCCGCGGCGATGGTCAAGATGGGCCGC
ACCGACGTGCTTGTCGGCGATCATGGGGAGATCAGGCCAACGTGTGGCATTTTTGTTGAC
TAG

Peptide Sequence

PEP ID

Zm00001d038599_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:6:160734732:160736672:1 gene:Zm00001d038599 transcript:Zm00001d038599_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peroxidase 1

Sequence

MWRERRRALLLLVAGAALGLIGAALASAPPEAALKVGFYHATCPIAEDVVLAEMRLILME
DATVAPSLLRMHYHDCFVQGCDGSIMLQSRKKGKAERDALPNRSMRGFDAIERIKARLET
VCPLTVSCADIIAMAARDAVYLSHGPWYDVETGRRDGNVTVAEYVDNDLPPPDSNIVDVK
TFFSVKSLNSKDIAVLFGCHSIGTSHCGPIQKRLYNFTGNMDGQDPSLDPAYAAELRKLC
PPPRPGDDARKVKVPLDPGSNYTFDLSYYRHVLATGGLFQSDGSLLHDPVTRGYVEKVAK
ASSPDEYYADFAAAMVKMGRTDVLVGDHGEIRPTCGIFVD

Transcript Sequence

Transcript ID

Zm00001d038599_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:160734732:160736672:1 gene:Zm00001d038599 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peroxidase 1

Sequence

ACCTCTCGTCTCGTCACACACCATCCGAAAGCCACCGGGCAACCAACCAGGCCGCCGTGT
GATCCCGATCGCGTACTGCGCGCACGCAGTACAGCTCGCGCGCGCACCAGACAGACGCCT
TCTCCCTCTCCCGCAGTACAGGGTACAGCTCGCGCTCACACAAGACACCATCTCCCTGCC
TGCGATCCGATGCGTCCAACGTTTTCAGCCGGGGTACGGTCCTACCACCGCTGTGCCTAA
TAATTGGCGGCTAGCTAGCTAGCTAGCTGCAGCTGCTGCGATCCTGGATCGGCACAGCCG
GTTCTTGATGTGGAGGGAGCGGCGGCGGGCGCTGCTCCTGCTGGTGGCCGGCGCGGCGCT
GGGACTGATCGGTGCCGCGCTCGCGAGCGCGCCGCCGGAGGCCGCGCTGAAGGTCGGGTT
CTACCATGCGACGTGCCCCATCGCGGAGGACGTGGTCCTCGCCGAGATGAGGCTCATCCT
CATGGAGGACGCCACGGTCGCGCCGTCCCTGCTCCGGATGCACTACCACGACTGCTTCGT
GCAGGGCTGCGACGGGTCGATCATGCTCCAGTCGAGGAAGAAGGGGAAGGCGGAGCGGGA
CGCGCTGCCCAACCGTAGCATGCGAGGGTTCGACGCCATCGAGCGGATCAAGGCCCGGCT
CGAGACCGTCTGCCCGCTCACCGTCTCCTGCGCCGACATCATCGCCATGGCGGCGAGGGA
CGCCGTCTACCTGAGCCACGGGCCGTGGTACGACGTGGAGACCGGGCGGCGCGACGGCAA
CGTCACCGTGGCCGAGTACGTCGACAACGACCTGCCGCCGCCGGACTCCAACATTGTCGA
CGTGAAGACCTTCTTCAGCGTCAAGTCGCTTAACTCGAAGGACATCGCCGTCCTCTTCGG
GTGCCACAGCATCGGGACCTCCCACTGCGGCCCGATCCAGAAGCGGCTCTACAACTTCAC
CGGCAACATGGACGGCCAGGACCCGTCGCTGGACCCGGCCTACGCCGCCGAGCTCAGGAA
GCTCTGCCCGCCTCCCAGACCCGGCGACGATGCTAGGAAGGTCAAGGTGCCTTTGGACCC
CGGCAGCAACTACACCTTCGACCTGAGCTACTACCGCCACGTGCTCGCCACGGGCGGGCT
GTTCCAGTCCGACGGCAGCCTCCTGCACGACCCCGTCACCAGAGGCTACGTCGAGAAGGT
GGCCAAGGCGTCGTCGCCCGACGAGTACTACGCGGACTTCGCCGCGGCGATGGTCAAGAT
GGGCCGCACCGACGTGCTTGTCGGCGATCATGGGGAGATCAGGCCAACGTGTGGCATTTT
TGTTGACTAGGTTCAGGATTGGGTTGAAGATGCGAAGATAATCTGTACGGGTTTCTGTCA
ACGTGTACTGTGCGTGCTGTTAGATCAGAAAGAGCACGGTCGCTGTTAACTGTGTATCCG
GGAATGCTGTTCTGTTCACACACGGTCGTCACTGATCTACTGAATTGTCAGCCATGATGT
AATTATTTATCTACGTATTAGTTGTATATTCTTCTGATC