Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d038587_T035
CDS Infomation	cds chromosome:B73_RefGen_v4:6:160556848:160563218:-1 gene:Zm00001d038587 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein FRIGIDA-ESSENTIAL 1
Sequence	ATGCATCATCATCTAGGTTTTTGTGGAGTGACTGTTGCTGAGAAGAGACCAATGATGCAA TCTCGTGATGTTGATAAATATTTGAACAAAGCTGACAACATTAACCATGTGCTCATGAAC TCTGGCGACATTTCTAAAATTGGTGGTCACTGCCTGCATGGTACACATGGTTTGGGGACT CGGCTAGATTCTGATGCTCAGAGCTCATCCCCTGGAGAAAATATGAACAACAAAATCAGA AGGCCCATCGAAATATGTACCTTTGATGCTCAAGGTCGGTGCAAGAAAGGAAAGAGTTGC ATCTCTCTTCATGAAAGGGAGGGATTTGGTTCTGCAAAGACTGGTCTGCTCGCACCAGCT GGTTCTGGAAATCATAGAGGTTCTGAAGGAGGTTCTCAAGTACAACATATATCTGACTTG AAAGTGCATCAGTTCAAGGATTCAGAGGGTTTGTCAAAAGATGAAATGTGTCGGAATCTT ATTTATGCATTTGGCAAAGATAATCAGATGTCGGTACATCTTGCTGGTAAACACAGCTCT CCCATTCCTGGGGTTTCACAAAGGATGCCCGTCAGCATTGGTCATTCATTGGCTCAGAAT CCATTAGTTCATGAGAAGAACAACAAACGTTTCATGGGACACCATATTGATGTGGCTGCT GAAAACTATTTGGATGCTGGAGGTACCTATCCAAGATTAGATGGAGGTATTTTTCAGTTT GACATAGACAAGGAAAGCAGTGTTAGTGATTCCCATGTCTCAAGAACTTACCTTTCAGAT TATCCATATAAATCATTTGGCTTGTCTATTTCATCTGATCCTCTCCAGCTCAGTGAGAAG CTGTCAGCATATGGTGGAGTGACAAATACTATTCCTAACATACATCAGAAAGAACATCAC TCATGCCATGCTTCATACAGCTCACATAGCTTAACAGGATCCAGAAATCCTTGCTTTGCT ACCTCTGAACATACTTTCGGTAGCCCATCTCTTCTAGCAACTTCTCATCTGGGAATACAG TCCCATCATCTGTTCACATCTGATATTGAGAAGGCTGATCTCCATAGATGCCTTGATGTT GGAAAGGGCTATGGTACTTCTAGTTCTGGACCCGCATTGCTTGTGAGCAGTAAACCTGAA CCTTCTATGACGCCAGTTGGGCCCCACTCTCCAATTAAGAATGAGGTCTGGGAAACATCA GTGCCTTTTGTACCTTCTTTTAGTTTTCCTGATAGCACAACAGCTTCAGAAAGTCAATAT GATCCATTTGTTGACTATGTTGAACCTCCTAAAGTTGGGAATACAAATAATCTCAAGCCC TCCACTATATCCTGCAACATTACAAGTCAGCATACAGATCAGTACGCAGTTACTGATAAA TCCTTGAATTGCAATGACAAATTGACCAGGAATATAACTGCCAAAGGATCAAATGAACCT GCTTACTTTATTGCTCCTGATAGAGGATGCAGCTCTAGCCTGGATGATACTATCAAGGTG AAAGCTTGTGACAGAAAAAAGGATGCAGTTGATTACAATGAGAAAACAAGGGATTTCCGT TTTCATTTGGCAGAACATATAAAGGAGTTGGTCAAACCAATATGGAAAAAAGGTAATCTG AGTAAAGATGCTCATAAACTGGTAGTGAGAAAATCTGTCGAGAAGGTTGTGGACTCCATT GAGCCAAATCAAGTACCAACTACTGAAGAGTTGATTACGAAGTACATAGCCACATGTGGA CCAAAGATAGAAAAACTTGTGAAGGCATATGTTGATAGGCACAGTACATGTCATCCAACC ATCAAATACAGCAGCTCTGAGATGGGAGCTTGA

Peptide Sequence

PEP ID	Zm00001d038587_P035
PEP Infomation	pep chromosome:B73_RefGen_v4:6:160556848:160563218:-1 gene:Zm00001d038587 transcript:Zm00001d038587_T035 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein FRIGIDA-ESSENTIAL 1
Sequence	MHHHLGFCGVTVAEKRPMMQSRDVDKYLNKADNINHVLMNSGDISKIGGHCLHGTHGLGT RLDSDAQSSSPGENMNNKIRRPIEICTFDAQGRCKKGKSCISLHEREGFGSAKTGLLAPA GSGNHRGSEGGSQVQHISDLKVHQFKDSEGLSKDEMCRNLIYAFGKDNQMSVHLAGKHSS PIPGVSQRMPVSIGHSLAQNPLVHEKNNKRFMGHHIDVAAENYLDAGGTYPRLDGGIFQF DIDKESSVSDSHVSRTYLSDYPYKSFGLSISSDPLQLSEKLSAYGGVTNTIPNIHQKEHH SCHASYSSHSLTGSRNPCFATSEHTFGSPSLLATSHLGIQSHHLFTSDIEKADLHRCLDV GKGYGTSSSGPALLVSSKPEPSMTPVGPHSPIKNEVWETSVPFVPSFSFPDSTTASESQY DPFVDYVEPPKVGNTNNLKPSTISCNITSQHTDQYAVTDKSLNCNDKLTRNITAKGSNEP AYFIAPDRGCSSSLDDTIKVKACDRKKDAVDYNEKTRDFRFHLAEHIKELVKPIWKKGNL SKDAHKLVVRKSVEKVVDSIEPNQVPTTEELITKYIATCGPKIEKLVKAYVDRHSTCHPT IKYSSSEMGA

Transcript Sequence

Transcript ID	Zm00001d038587_T035
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:160556848:160563218:-1 gene:Zm00001d038587 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein FRIGIDA-ESSENTIAL 1
Sequence	GCACCCAGCGTGCCTTTTCTTCTTCCATCACAGCCTAGTGTGCGCTCTCTCTCGTGGGCA CGCTTGGGCGACCGTCGTCGCCGCCGCCACCGTCGCCGCCTACGATAGGTGGCCAGGTCT TCTTCGATCTCTCCGCCGGAGACGAGCACCATCAGGTACATCTTCCCCTTCACTTCCTGC TGTGCGAAACCGCACACCCAAACCCTAACTTACTTTTTGTATTCGGATCTGACCTATTTG CAAGTGTATATGCATGTATTATGGCTACTAACTTCGATTGCTTTGCGAAAATTACAGGGT ATAGATGTGTACGTCAATGTCCTTTACCGGGTCCACCCCTGATTAGCAAATGGCTACGAT TCTGGTATTGCGATGTGTCTAGGGCCTGCCCTGGCATGCTGACCTGAGCTGGGTAGCTGA TCCATTTATCGTTAGACTGTCGCGATCTATGGTTTAGGGTAAAGTTGTACAGCTGATCAA TCAATAGCTAGATCGATTGAGCCAATGTCTGCACCTGACGTTGTCGGTTTTACTAGTTGC CATAATGGTGGAGCTAGAAGTTGCTTTGTTATCTAGAGAATAGGCTTGATAGTAGCCTGT GAGTGATGTATTATGCAATGAAGCAATGTGGCATGTTTGAGGTTCGTAGTTATCAGTTTC CAGTTATTATGTGGATTATGCTACATTTGTCGTCATGTTGATTTTGTCTCGTTAGTCTAT GTGAAGTGATGACATACACGTGTGACGTATGACTGATTCTTTTAAAACCATACCTTTTTC CTTGTGGGTCTTCAATGATTTCTTGTTTACGTATTGCCAATAATGAACTGACTTTTTCTT AAGAACTGTTTTGCGTGAAAAACTATGTATTTTGTTGAAGAGTCATTTTCTTTTTGACTA GCAAGTTCTGATCAGATAGGTGAGAAGTGCCACCTGTTGCTACTCTGTTAATGAAATAGT CATGAGGACGTAGGGGTGTGAGGGAAGGTGTTGTTTGTTTCGTGTTCTTCACTTAGTTAC AGATGTGCAATATATTAGCACACCAAGTTTCTGAGTTGCAGATCATTCGTAAAAGTTTAT TTGTTTACGTTTGATTAGCTCATGCCATTGTTTTACACAAGTATGAGAATGAAATGGGCA AATCTACTAACTTATTATACACCTACAACAGGAAATAAAAGTTCACTTGGTATAATTTGT ATTGTAATAAACACTATTTTGACGAACCAATTTGACATGTCATTAGACCTGTTACTATTA CTGGCGAAGCCACCACCATCCATCCTTTTATCTTTAGTCCTTTCGTTGGATGATTAGTCA CACAGACATGAATTAATAATCTACATTGATTTTATTATCGTGGCTTTTATATCTATGCAT GCTTATTAAGGCGGTAAGGTGAGGCGTGGTGGCCCACCCTATTCCAGTTGCCTAGGAGAA TCAGGTGCGCGGCGAGGTGACACCATACACATACTCTCACCTACATCAGAGCAGGACAAA CATCAGGGCCGGATCTATATAGTAATTAGACAGTGTGGCCGCACCCATACAAAAATGAAA AACAGTGATTATGACCAATATTTTACCATATTCGCACCCTCATGATAAAAATCTACACAC CCACAAGCCAAGCGCACCCCCTCGAATTTGCTATAGCTTAGCCCCTGACATACATTGATA CATATACCTTTTTGCTGCCGGTTTTAGAGCCTATGCACAAGCAGCCACCACGCACTAGCT AGAGCACAAGCAGAATACCATATCAAAGAAATATATCCAAATCTGAGTCCAGGAACCAAG CAAGCATAAATATATTTCAGACTTTTGAACAGAGGAAGGAAAGGGGAAGAAGAGAAGAGG AAGGGATTGCGATGGAGAGCAAAGGAGGGGAGATGAGGGTACTTGTGAACTGACGTGAAG GGTCCTGGGCTACAGACAGGGTATCGAGCAGAGGAAGGACACACTAAGACACTAAGTCCA TGTAGAAGTGGAAGCAGTCATTAATCGACGAGGTAGACCAATAGAGGTCAGAGGTTCGGA TTGGTGGGTGGAGGTTGGACATCAGAGGCTGATGGAGCAGAGGTTGGGGGCAACGTATCA GTGGTGGTCATGGAGTCACAGTAAGAGCTGTGAATCGGTGGAGCGGAAGGGGCGGGAGTG GCTGGATGAGGCAGGACTTGCCTCTGGATTACAGGTGCCGCCGCCACCATCTTCTCTTCC CTTTTCTCCTCTCTTTCTCTCCCCTTCTCCCAATTAGCGAGCTGCAGGGATGCTGTGCGT TCTCTTGGGAGGTATAGGGCTATAGGCGCATGATTTCCCATCCACACGCTTAGCTCTCTC TAGTTTTCCCCATGTGCATAGCTCTGCGAACTTTTCCCTGCACGTGCAGCTGCTTTTTTG CTCATGCGGCGTTGGTGCCATACCTTGGTGACGACTTTTACACGTGAGTCAACGTCATAC ACAGGGAGGTTACTATTGGCATGGCACTTTGATTGGAAAGCACCTAGATGCCTAGGCAAT GCCTTAATAACCATGTATCTATGCTCTAGCCTACCCAACTTGCTTGGAACTAATGCTCTG TTTGGTTGCTTCTTGCTTGTCTTAGGAACTAGCCATGCGAGGCCTAAGTCAGCCCAGTCC TGAGGCCTGGCCTGGTTGGAGCAAGCATTTTGCTCAGTGGTTGGTTTGCCTACAGAGATT AGCCCGTATTACAAACGTTGTGTTTGATTGTCTAGCTTGTATTGGATATGTTGGTGACTG GTGAGTCTATTTGGATCACGTATGCTTCAGACCAGAACCACAATCTCTTTGTTTCTCTCT ATTCATTTCCACAATTCTGCAGCGCAAGATTCTCACAGAAGGATTCCAAGTGAACTAATT GTTTTGCAGCAGCAGTAAAACTTAAGTGACAGAATTCACAACTGATGGTAGCACCAATCA ACTCAGATTGGATCATCCAACATGGAATTGAATATGATTTGATATCAGAAACTAGTAAAC CACCTGTCAATTCAGTGCATATCTCAGGTTCTAAAAACTAATTAGCAGAAGCAATCTAAT CTGCTCAGTTAAGTACACTTGCTTGCAGCAAATCACTAAATTTCCAATGATTCTGATGTC TGATAGTGGGAGAACCTGAGCTTGGTTCAAGCCGCGGACCTGTGTCATGGGGCGTGGCAG GTTGGTGGCAGCGAGGAAGAGCTCAAATCCTTTTTGGTCCTGCTGACACCGTGAAGTTGC ATTTTATGAGCCTGTCCATGCCCTAATCCAGGCAACCTAACATACCCTAAAAGGCCTTGT TGTATCCATGCTCCATTGAATTGAACCTCATTTGTTTCAATTATATTTCCCTGTACTTAA TACAAGTTGTGTTCCCTTTTTATTTGGCGTGGGATGTGAAGGGGGCTTGGAAGGTTTAAA ACCCAGCAAAACTAGTAATAAAAATTGAAACTACCAAGTCCAAATCATGGTGCACCTGGG AGATCTTACGATGAAATCTTCATTAACTGATTTCCTGGAACTGGATGAGAGGTACTCTAC TTGAGATCTTATGAAAAGAAAAAAAGATATCCTTGAACCGAGATACAGCTGCATGAATAC GTAACACGTGTCGGCACATACTTGTAGTAGTTTTGCAATAGAATACACTAGGAGTCATGG TTTTTAGAGCGGTAAGGCGGTCCAAGGCGTTGGACCACCGCCTGGACGCCTAGGCGGCGC CTAGGCGAGGTAGGCGGGCAAGGCGCCTAGGCGTTAGACCACAACCCGGACGCCTAGGCG ACGCCTTAAGAACAGTAGTAGGAGTAAGGTGACTTTAGTAGCAAATCTTCTCTGAAGGTT TCTCAGGTCAAATGTTTTGGCTCATGTTGGGTTTCAAATCCAGACTACCCCAACTTGCTT ACGACTGAAAGGCTTTGTTGTTGTTGTTTTCGTGTTATGATTGAAAGTATTGACATTTTT GGTCTTATATTTTGACCATGCATCATCATCTAGGTTTTTGTGGAGTGACTGTTGCTGAGA AGAGACCAATGATGCAATCTCGTGATGTTGATAAATATTTGAACAAAGCTGACAACATTA ACCATGTGCTCATGAACTCTGGCGACATTTCTAAAATTGGTGGTCACTGCCTGCATGGTA CACATGGTTTGGGGACTCGGCTAGATTCTGATGCTCAGAGCTCATCCCCTGGAGAAAATA TGAACAACAAAATCAGAAGGCCCATCGAAATATGTACCTTTGATGCTCAAGGTCGGTGCA AGAAAGGAAAGAGTTGCATCTCTCTTCATGAAAGGGAGGGATTTGGTTCTGCAAAGACTG GTCTGCTCGCACCAGCTGGTTCTGGAAATCATAGAGGTTCTGAAGGAGGTTCTCAAGTAC AACATATATCTGACTTGAAAGTGCATCAGTTCAAGGATTCAGAGGGTTTGTCAAAAGATG AAATGTGTCGGAATCTTATTTATGCATTTGGCAAAGATAATCAGATGTCGGTACATCTTG CTGGTAAACACAGCTCTCCCATTCCTGGGGTTTCACAAAGGATGCCCGTCAGCATTGGTC ATTCATTGGCTCAGAATCCATTAGTTCATGAGAAGAACAACAAACGTTTCATGGGACACC ATATTGATGTGGCTGCTGAAAACTATTTGGATGCTGGAGGTACCTATCCAAGATTAGATG GAGGTATTTTTCAGTTTGACATAGACAAGGAAAGCAGTGTTAGTGATTCCCATGTCTCAA GAACTTACCTTTCAGATTATCCATATAAATCATTTGGCTTGTCTATTTCATCTGATCCTC TCCAGCTCAGTGAGAAGCTGTCAGCATATGGTGGAGTGACAAATACTATTCCTAACATAC ATCAGAAAGAACATCACTCATGCCATGCTTCATACAGCTCACATAGCTTAACAGGATCCA GAAATCCTTGCTTTGCTACCTCTGAACATACTTTCGGTAGCCCATCTCTTCTAGCAACTT CTCATCTGGGAATACAGTCCCATCATCTGTTCACATCTGATATTGAGAAGGCTGATCTCC ATAGATGCCTTGATGTTGGAAAGGGCTATGGTACTTCTAGTTCTGGACCCGCATTGCTTG TGAGCAGTAAACCTGAACCTTCTATGACGCCAGTTGGGCCCCACTCTCCAATTAAGAATG AGGTCTGGGAAACATCAGTGCCTTTTGTACCTTCTTTTAGTTTTCCTGATAGCACAACAG CTTCAGAAAGTCAATATGATCCATTTGTTGACTATGTTGAACCTCCTAAAGTTGGGAATA CAAATAATCTCAAGCCCTCCACTATATCCTGCAACATTACAAGTCAGCATACAGATCAGT ACGCAGTTACTGATAAATCCTTGAATTGCAATGACAAATTGACCAGGAATATAACTGCCA AAGGATCAAATGAACCTGCTTACTTTATTGCTCCTGATAGAGGATGCAGCTCTAGCCTGG ATGATACTATCAAGGTGAAAGCTTGTGACAGAAAAAAGGATGCAGTTGATTACAATGAGA AAACAAGGGATTTCCGTTTTCATTTGGCAGAACATATAAAGGAGTTGGTCAAACCAATAT GGAAAAAAGGTAATCTGAGTAAAGATGCTCATAAACTGGTAGTGAGAAAATCTGTCGAGA AGGTTGTGGACTCCATTGAGCCAAATCAAGTACCAACTACTGAAGAGTTGATTACGAAGT ACATAGCCACATGTGGACCAAAGATAGAAAAACTTGTGAAGGCATATGTTGATAGGCACA GTACATGTCATCCAACCATCAAATACAGCAGCTCTGAGATGGGAGCTTGAGCTTAATGGT GATGACAGCTTGAACCTTCTGTCCTACCAATCTGGTTAACCTTCATTTGTAGGCCCAACA AGTTAATATTGGTATGGCAGTCGTTTCAAATAATATGTTTTGTAGCTTGAACCTGGTTGG TTTTGCAGACTTCAGTCTGAACTCCCTTAAGAGTAACTGGAGATGGTAGATTTTTAGTTT ATGTTTGCATGTTAAATGTGATGTCATCTAATGCAGCTAAGAACAAGCTTAACTGCA