Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d038576_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:6:160345574:160353313:1 gene:Zm00001d038576 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-transporting ATPase 4 plasma membrane-type
Sequence

ATGGACTCGGGCAGCAAGAGCTGGAGCATCGATAGCTACCTCAACGAGCACTTCGACATC
CCCGCCAAGAACCCGCCCAGCGAGGCCCGCCTCCGCTGGCGCCGCGCCGTCGGCCTCGTC
GTCCGCAACCGCCGCCGCCGCTTCCGCATGTTCTCAGGCCTCCACGCCCTCGACGACGCC
CAGCGCCGCAACATCCTGGGAAAAGTTCAGGTTGTAATTAATGTGCACAAGGCAGCGCTG
CATTTTATGGACGGTATAAGACGATACCACCTATCTCCTGAGCTTATCGAAGAAGGATTT
TGTATCAGTCCAGATGAACTGGCAGCAATTACTGGAATCCGTGAAGACTCTACGATCCTC
AAGTCACATGGTGGAATCAGTGGAATATCTAGGAAAATCAAGGCATCATTGGATGATGGC
ATCAAGGAAACTGAAATAGCAACCAGACAGAAGCTGTATGGCAGCAACAAGCACACCGAG
AAACCTCCTAGAAGCTTCTGGACGTTTGTCTGGGATGCGTTGCATGACCTGACGTTGATT
ATTCTAATCGTTTGTGCCGTTGTTTCTCTAATGGTTGGCCTTGCCACTGAGGGATGGCCG
AAGGGCATCTATGACGGCCTTGGCATAATAACCAGCATTTTGTTGGTGGTGCTGGTCACA
GCATCCAGTGATTACAAACAGTCACGGAAGTTCATGGAGCTGGACTACGAGAAAAAGAAG
ATATACGCCCTTGTCACTAGAGATAGGAAAACCAAAAGGGTACTGATTCATGATCTGGTT
GTGGGTGACATCTTGCATCTTTCAGTAGGCGATGTGGTTCCTGCAGATGGCCTGTTCATC
TCTGGCTACTGCCTAGTCATAGATGAATCTAGCTTATCAGGCGAGAGCGAACCAGTTGAT
GTTTCTGAAGAAAAGCCTTTCGTTCATGCTGGAAGTAAGGTGGTAGATGGGACTGCCAAG
ATGCTTGTGACTGCTGTTGGTATGCGTACTGAATGGGGCAAAGTCATGGATACTCTGAGT
GCTGATGGAGTGGATGAAACCCCTTTACAAGTTAAGCTCAATGGTGTGGCCACGATCATT
GGACAGATCGGGCTGGCGTTTGCTATCCTCACATTTCTAGTGCTCCTAGTGAGGTTCCTG
GTGGACAAAGGAATGCATGTTGGGTTGTCAAATTGGTCAGCAAATGATGCGCTGACAATA
GTGAACTACTTTGCTATTGCAGTGACAATCATCGTTGTCGCAGTGCCCGAGGGTCTACCA
CTGGCTGTGACTCTTAGCCTCGCGTTTGCCATGCAGAAGTTGATGAATGACAAAGCGCTA
GTGAGACATCTCGCTGCGTGTGAGACCATGGGTTCAGCAAGTTGTATTTGCACTGATAAG
ACTGGAACTTTGACGACTAACCACATGATCGTTGACAAGGTTTGGATGGGCGATGTATCC
AAGTCTGTCAACAGTGATACAAATATGAACGAGCTGAAGGATGCTACTGCAGAAAGTGCT
GTGGACTTACTTGTTCAGGGAATATTTGTGAACACTGCTGCTGAGATCGTGAAGGGAGAT
GATGGCAGAAGATCTATCTTAGGCACACCAACTGAAGCAGCGTTGTTGGAGTTTGGCTTG
GGCTTGCAAGGAGATCTATACGGTGAGTACAATAAGATGGCAAGAGTCAAAATAGAGCCC
TTCAACTCAGTTAAGAAAAAGATGTCTGTGGTAATACAGTTACCTAATGGAGGCCTCCGG
TCCTTCTGCAAAGGTGCATCAGAACTTATTCTAGGGCAGTGTGACAGCTTCCTCAACAGT
GAAGGAAATTTAGCACCACTGTCAGAAATGCAAAAGCAGAATGTCTTAGATATAATAAAC
TCGTTTGGATCTGAGGCGTTAAGAACGCTCTGTATCGCGTTTAAGGATCTGGGTGAAATT
CCTGACGACCAAACAATACCAGAGGATGGTTACACACTAATAGCGCTTTTTGGCATAAAG
GATCCAGTCCGTCCCGGTGTGAGGGATGCAGTGATGACCTGCATGGCTGCTGGAATTAAA
GTTACAATGGTGACTGGAGACAACATCAATACTGCTAAAGCCATTGCCAAGGAATGTGGG
ATATTAACCGAGGATGGAATCGCAATAGAAGGAAGAGAGCTTCACGATAAGAGCATGGAT
GAACTGAAGGAGATCCTGCCTAAAATTCAGGTAATGGCCCGGTCCTTGCCGATGGACAAA
TATAAACTGGTGACAAGCCTAAAAAGTATGTATCAAGAGGTGGTGGCAGTTACTGGTGAT
GGAACCAATGATGCCCCAGCATTGAGTGAGTCAGACATAGGTCTGGCCATGGGAATTGCC
GGCACTGAGGTCGCAAAAGAAAATGCCGATGTTATAATAATGGATGATAATTTCAGTACC
ATTGTAAATGTTGCTAGATGGGGTCGTGCGGTTTACTTGAACATTCAGAAGTTTGTGCAG
TTCCAGCTTACAGTTAATATAGTGGCTCTGATAGTGAATTTCATCTCAGCGTGTATCATA
GGTACTGCACCACTTACTGCCGTCCAGTTGCTATGGGTGAACATGATCATGGATACATTA
GGAGCCTTGGCCTTAGCGACAGAGCCGCCTAACGATGAAATGATGAATAGACCACCAGTG
AGACGGGGGCATGGTTTTATCACTCAGGTCATGTGGAGAAATATTCTTGGGCAGGCTTTA
TATCAGCTCCTTGTGCTTGGTACTCTCATGTTTAATGGGAAGAGGATCCTTAACATCGAA
GGCCCAAATGCTGATAGAACTATCAATACCCTCATATTCAACTCTTTTGTGTTTTGCCAG
GTTTTCAACGAGATAAATAGCAGGGAAATGGAAAAGATCAACGTGTTCAGAGGGATACTG
AAAAACTGGGTCTTTATCGGTATATTGACAACAACCATCATATTCCAAGTAATCATAGTA
GAGTTTCTTGGAACCTTTGCAAACACCGTACCATTGAGTTGGGAGCTATGGTTGCTCAGC
GCTATTCTTGGCTCGGTCAGTTTGGTTATCTCTGTTATCCTCAAGTGCATTCCCGTCGAA
TCTAGGAAAACGGATATTAAGCCCCATGGCTATGAGTTGATTCCTGAAGCCCCAGAAACA
GTTTAG

Peptide Sequence

PEP ID

Zm00001d038576_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:6:160345574:160353313:1 gene:Zm00001d038576 transcript:Zm00001d038576_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-transporting ATPase 4 plasma membrane-type
Sequence

MDSGSKSWSIDSYLNEHFDIPAKNPPSEARLRWRRAVGLVVRNRRRRFRMFSGLHALDDA
QRRNILGKVQVVINVHKAALHFMDGIRRYHLSPELIEEGFCISPDELAAITGIREDSTIL
KSHGGISGISRKIKASLDDGIKETEIATRQKLYGSNKHTEKPPRSFWTFVWDALHDLTLI
ILIVCAVVSLMVGLATEGWPKGIYDGLGIITSILLVVLVTASSDYKQSRKFMELDYEKKK
IYALVTRDRKTKRVLIHDLVVGDILHLSVGDVVPADGLFISGYCLVIDESSLSGESEPVD
VSEEKPFVHAGSKVVDGTAKMLVTAVGMRTEWGKVMDTLSADGVDETPLQVKLNGVATII
GQIGLAFAILTFLVLLVRFLVDKGMHVGLSNWSANDALTIVNYFAIAVTIIVVAVPEGLP
LAVTLSLAFAMQKLMNDKALVRHLAACETMGSASCICTDKTGTLTTNHMIVDKVWMGDVS
KSVNSDTNMNELKDATAESAVDLLVQGIFVNTAAEIVKGDDGRRSILGTPTEAALLEFGL
GLQGDLYGEYNKMARVKIEPFNSVKKKMSVVIQLPNGGLRSFCKGASELILGQCDSFLNS
EGNLAPLSEMQKQNVLDIINSFGSEALRTLCIAFKDLGEIPDDQTIPEDGYTLIALFGIK
DPVRPGVRDAVMTCMAAGIKVTMVTGDNINTAKAIAKECGILTEDGIAIEGRELHDKSMD
ELKEILPKIQVMARSLPMDKYKLVTSLKSMYQEVVAVTGDGTNDAPALSESDIGLAMGIA
GTEVAKENADVIIMDDNFSTIVNVARWGRAVYLNIQKFVQFQLTVNIVALIVNFISACII
GTAPLTAVQLLWVNMIMDTLGALALATEPPNDEMMNRPPVRRGHGFITQVMWRNILGQAL
YQLLVLGTLMFNGKRILNIEGPNADRTINTLIFNSFVFCQVFNEINSREMEKINVFRGIL
KNWVFIGILTTTIIFQVIIVEFLGTFANTVPLSWELWLLSAILGSVSLVISVILKCIPVE
SRKTDIKPHGYELIPEAPETV

Transcript Sequence

Transcript ID

Zm00001d038576_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:160345574:160353313:1 gene:Zm00001d038576 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-transporting ATPase 4 plasma membrane-type
Sequence

AGTTTTGCTGGTTTATATTCCTTCCGCTTCCGGCCTTTCAATGCAGCGAGCGCACGCAGC
GCGGGAGAAGGCGAAGCGCGAGAGCAGAGGCGCAACGCGGCGCCGGCATGGACTCGGGCA
GCAAGAGCTGGAGCATCGATAGCTACCTCAACGAGCACTTCGACATCCCCGCCAAGAACC
CGCCCAGCGAGGCCCGCCTCCGCTGGCGCCGCGCCGTCGGCCTCGTCGTCCGCAACCGCC
GCCGCCGCTTCCGCATGTTCTCAGGCCTCCACGCCCTCGACGACGCCCAGCGCCGCAACA
TCCTGGGAAAAGTTCAGGTTGTAATTAATGTGCACAAGGCAGCGCTGCATTTTATGGACG
GTATAAGACGATACCACCTATCTCCTGAGCTTATCGAAGAAGGATTTTGTATCAGTCCAG
ATGAACTGGCAGCAATTACTGGAATCCGTGAAGACTCTACGATCCTCAAGTCACATGGTG
GAATCAGTGGAATATCTAGGAAAATCAAGGCATCATTGGATGATGGCATCAAGGAAACTG
AAATAGCAACCAGACAGAAGCTGTATGGCAGCAACAAGCACACCGAGAAACCTCCTAGAA
GCTTCTGGACGTTTGTCTGGGATGCGTTGCATGACCTGACGTTGATTATTCTAATCGTTT
GTGCCGTTGTTTCTCTAATGGTTGGCCTTGCCACTGAGGGATGGCCGAAGGGCATCTATG
ACGGCCTTGGCATAATAACCAGCATTTTGTTGGTGGTGCTGGTCACAGCATCCAGTGATT
ACAAACAGTCACGGAAGTTCATGGAGCTGGACTACGAGAAAAAGAAGATATACGCCCTTG
TCACTAGAGATAGGAAAACCAAAAGGGTACTGATTCATGATCTGGTTGTGGGTGACATCT
TGCATCTTTCAGTAGGCGATGTGGTTCCTGCAGATGGCCTGTTCATCTCTGGCTACTGCC
TAGTCATAGATGAATCTAGCTTATCAGGCGAGAGCGAACCAGTTGATGTTTCTGAAGAAA
AGCCTTTCGTTCATGCTGGAAGTAAGGTGGTAGATGGGACTGCCAAGATGCTTGTGACTG
CTGTTGGTATGCGTACTGAATGGGGCAAAGTCATGGATACTCTGAGTGCTGATGGAGTGG
ATGAAACCCCTTTACAAGTTAAGCTCAATGGTGTGGCCACGATCATTGGACAGATCGGGC
TGGCGTTTGCTATCCTCACATTTCTAGTGCTCCTAGTGAGGTTCCTGGTGGACAAAGGAA
TGCATGTTGGGTTGTCAAATTGGTCAGCAAATGATGCGCTGACAATAGTGAACTACTTTG
CTATTGCAGTGACAATCATCGTTGTCGCAGTGCCCGAGGGTCTACCACTGGCTGTGACTC
TTAGCCTCGCGTTTGCCATGCAGAAGTTGATGAATGACAAAGCGCTAGTGAGACATCTCG
CTGCGTGTGAGACCATGGGTTCAGCAAGTTGTATTTGCACTGATAAGACTGGAACTTTGA
CGACTAACCACATGATCGTTGACAAGGTTTGGATGGGCGATGTATCCAAGTCTGTCAACA
GTGATACAAATATGAACGAGCTGAAGGATGCTACTGCAGAAAGTGCTGTGGACTTACTTG
TTCAGGGAATATTTGTGAACACTGCTGCTGAGATCGTGAAGGGAGATGATGGCAGAAGAT
CTATCTTAGGCACACCAACTGAAGCAGCGTTGTTGGAGTTTGGCTTGGGCTTGCAAGGAG
ATCTATACGGTGAGTACAATAAGATGGCAAGAGTCAAAATAGAGCCCTTCAACTCAGTTA
AGAAAAAGATGTCTGTGGTAATACAGTTACCTAATGGAGGCCTCCGGTCCTTCTGCAAAG
GTGCATCAGAACTTATTCTAGGGCAGTGTGACAGCTTCCTCAACAGTGAAGGAAATTTAG
CACCACTGTCAGAAATGCAAAAGCAGAATGTCTTAGATATAATAAACTCGTTTGGATCTG
AGGCGTTAAGAACGCTCTGTATCGCGTTTAAGGATCTGGGTGAAATTCCTGACGACCAAA
CAATACCAGAGGATGGTTACACACTAATAGCGCTTTTTGGCATAAAGGATCCAGTCCGTC
CCGGTGTGAGGGATGCAGTGATGACCTGCATGGCTGCTGGAATTAAAGTTACAATGGTGA
CTGGAGACAACATCAATACTGCTAAAGCCATTGCCAAGGAATGTGGGATATTAACCGAGG
ATGGAATCGCAATAGAAGGAAGAGAGCTTCACGATAAGAGCATGGATGAACTGAAGGAGA
TCCTGCCTAAAATTCAGGTAATGGCCCGGTCCTTGCCGATGGACAAATATAAACTGGTGA
CAAGCCTAAAAAGTATGTATCAAGAGGTGGTGGCAGTTACTGGTGATGGAACCAATGATG
CCCCAGCATTGAGTGAGTCAGACATAGGTCTGGCCATGGGAATTGCCGGCACTGAGGTCG
CAAAAGAAAATGCCGATGTTATAATAATGGATGATAATTTCAGTACCATTGTAAATGTTG
CTAGATGGGGTCGTGCGGTTTACTTGAACATTCAGAAGTTTGTGCAGTTCCAGCTTACAG
TTAATATAGTGGCTCTGATAGTGAATTTCATCTCAGCGTGTATCATAGGTACTGCACCAC
TTACTGCCGTCCAGTTGCTATGGGTGAACATGATCATGGATACATTAGGAGCCTTGGCCT
TAGCGACAGAGCCGCCTAACGATGAAATGATGAATAGACCACCAGTGAGACGGGGGCATG
GTTTTATCACTCAGGTCATGTGGAGAAATATTCTTGGGCAGGCTTTATATCAGCTCCTTG
TGCTTGGTACTCTCATGTTTAATGGGAAGAGGATCCTTAACATCGAAGGCCCAAATGCTG
ATAGAACTATCAATACCCTCATATTCAACTCTTTTGTGTTTTGCCAGGTTTTCAACGAGA
TAAATAGCAGGGAAATGGAAAAGATCAACGTGTTCAGAGGGATACTGAAAAACTGGGTCT
TTATCGGTATATTGACAACAACCATCATATTCCAAGTAATCATAGTAGAGTTTCTTGGAA
CCTTTGCAAACACCGTACCATTGAGTTGGGAGCTATGGTTGCTCAGCGCTATTCTTGGCT
CGGTCAGTTTGGTTATCTCTGTTATCCTCAAGTGCATTCCCGTCGAATCTAGGAAAACGG
ATATTAAGCCCCATGGCTATGAGTTGATTCCTGAAGCCCCAGAAACAGTTTAGGCCGATT
ATTCCTGTCCCACATGAATTGGATGAGATTAGAGAAAATTATAAAGGATTTTGATTTATT
TGGAATTGAGAGGGAATTAAGTTTGGCTTGTACATAATTTAAATTAAACGACGCTTATTC
TAGGATGGCGTAT