Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d038540_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:6:159599268:159602738:-1 gene:Zm00001d038540 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACTCCGGCGGTTCGGGTGGGGAATCCTCGCGCGCCCGGTCCGGGCGCCGCGGTGGTG
GAGGACGAGGAGGAGGCGGCGGTCGCGTGGCGGGAGCTGCGCGGCAAGGCCGCGGAGCTC
GCGGCTGCGGGCGAGGAACGGGCGATCCTGGCCCGCCGCATCGAGGCCGCGCTCCAGGTA
AGGAGGGAGGCGCTGCGGCAGGCGGAGGAGCTGGACGAGTTGACGCGGATGGTGGACCTC
CAGCAAGCGCGTTTGGAGGCGGCCGTCGTCGGCAGGAGGCGGGCGCTCGAGGCCGTGGAG
CGGGGGAAGGAGCGGCTGCAGGAGCAGATCGACCGGGTGCTGCCGCTGTCGAGGTCCCTC
ACCGCCGCGCACCATCGAGTGCAGGAAGCGAAGGAGGCGTTATCCGGAGACAAATTCAGA
CTCAAGGATCTGCAGAGGCTGCTTCGGACGAGGCAGCAGTGCATGGTTAGCCAGGTTGCT
GGTTTGTACCCTGTGAGAGTCTTCCATGATCTTCCAAGACATGCAGAAAACCCCTGTGCC
GATACTAATGGGGAGCATGTGACACTTCCAGAGGAAAACAGAACATTTTCAGGTGGAGAT
GGAACACATTTACCCACCATTATCAAATCTCCAGAAGCACGTGGCTGGACATTTTTTGGT
TGGGACATTATGAAGCATAAAATGAAGCAAAAAAGTTACAGGAACAAGGTGCTACAGAGG
TCCGCAGCTGTTCTGGGATATGCAGCACATGCAGTCTTGCTCATAGCTTGCTATCTTGAT
GTTCCCCTCCGATATCCCTTGCGCTTTGGAGGGTCCCGATCTTATGTGAGTGATCGCTTG
CCTTCAGCTGATACAGCATCATCGGCTGCTTTAGCAAGTACCAGGAACACCGAATCAGAA
CTAACAGAATACCCTCTTTTCCTGGAATGCCAAGACGATGACTCCACTAGTGCCTCCTAT
GCCATTTATTTATTGCACAAGGATACGGAGCAGCTTCTGAACTATGTTGGAGCTGAGAGC
TGTGGAAGGCACGTGTTTGGTAACCTACGAGAACTTCTTAGGATCGTGCAGTCTGATAAG
TTTGTGTACAGATGA

Peptide Sequence

PEP ID

Zm00001d038540_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:6:159599268:159602738:-1 gene:Zm00001d038540 transcript:Zm00001d038540_T001 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MTPAVRVGNPRAPGPGAAVVEDEEEAAVAWRELRGKAAELAAAGEERAILARRIEAALQV
RREALRQAEELDELTRMVDLQQARLEAAVVGRRRALEAVERGKERLQEQIDRVLPLSRSL
TAAHHRVQEAKEALSGDKFRLKDLQRLLRTRQQCMVSQVAGLYPVRVFHDLPRHAENPCA
DTNGEHVTLPEENRTFSGGDGTHLPTIIKSPEARGWTFFGWDIMKHKMKQKSYRNKVLQR
SAAVLGYAAHAVLLIACYLDVPLRYPLRFGGSRSYVSDRLPSADTASSAALASTRNTESE
LTEYPLFLECQDDDSTSASYAIYLLHKDTEQLLNYVGAESCGRHVFGNLRELLRIVQSDK
FVYR

Transcript Sequence

Transcript ID

Zm00001d038540_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:159599268:159602738:-1 gene:Zm00001d038540 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CCGGCCGGCAAAAACCCACACGACCCACGCATCGGCATCGCATTCACGTCCAACCGTTCG
CTTGCGCCCTCCGCAACAACGCAACGCATCGTGACGCCGCCGCTTTTTGCTTTTCCGACT
GCTGTTTCCGCCTTTTGAGTAGGCGTTGGGCGAGCTTCGGTTTCGACGGACGCAGCCGTC
ACCGCCTCACCGGCCCGGCCATGGGCGCCGCCGCCGCCTGCTCTCTTCGCCTCTGCCACA
CGTCACCATCCGCTGCGACGGTAGGGCCGCGATGACTCCGGCGGTTCGGGTGGGGAATCC
TCGCGCGCCCGGTCCGGGCGCCGCGGTGGTGGAGGACGAGGAGGAGGCGGCGGTCGCGTG
GCGGGAGCTGCGCGGCAAGGCCGCGGAGCTCGCGGCTGCGGGCGAGGAACGGGCGATCCT
GGCCCGCCGCATCGAGGCCGCGCTCCAGGTAAGGAGGGAGGCGCTGCGGCAGGCGGAGGA
GCTGGACGAGTTGACGCGGATGGTGGACCTCCAGCAAGCGCGTTTGGAGGCGGCCGTCGT
CGGCAGGAGGCGGGCGCTCGAGGCCGTGGAGCGGGGGAAGGAGCGGCTGCAGGAGCAGAT
CGACCGGGTGCTGCCGCTGTCGAGGTCCCTCACCGCCGCGCACCATCGAGTGCAGGAAGC
GAAGGAGGCGTTATCCGGAGACAAATTCAGACTCAAGGATCTGCAGAGGCTGCTTCGGAC
GAGGCAGCAGTGCATGGTTAGCCAGGTTGCTGGTTTGTACCCTGTGAGAGTCTTCCATGA
TCTTCCAAGACATGCAGAAAACCCCTGTGCCGATACTAATGGGGAGCATGTGACACTTCC
AGAGGAAAACAGAACATTTTCAGGTGGAGATGGAACACATTTACCCACCATTATCAAATC
TCCAGAAGCACGTGGCTGGACATTTTTTGGTTGGGACATTATGAAGCATAAAATGAAGCA
AAAAAGTTACAGGAACAAGGTGCTACAGAGGTCCGCAGCTGTTCTGGGATATGCAGCACA
TGCAGTCTTGCTCATAGCTTGCTATCTTGATGTTCCCCTCCGATATCCCTTGCGCTTTGG
AGGGTCCCGATCTTATGTGAGTGATCGCTTGCCTTCAGCTGATACAGCATCATCGGCTGC
TTTAGCAAGTACCAGGAACACCGAATCAGAACTAACAGAATACCCTCTTTTCCTGGAATG
CCAAGACGATGACTCCACTAGTGCCTCCTATGCCATTTATTTATTGCACAAGGATACGGA
GCAGCTTCTGAACTATGTTGGAGCTGAGAGCTGTGGAAGGCACGTGTTTGGTAACCTACG
AGAACTTCTTAGGATCGTGCAGTCTGATAAGTTTGTGTACAGATGATGGTTCCAATCCAT
GTGGTTTTGGAGTGCTTATGCTGTAGATGTATTATAGAGATGTAAGTAGGTGTTTTTCTT
TTCTCTTCCTATTCTTTCGTGTGATTCATTCCCTCTTTCCCTGCGCTAGGTTTTTTATAT
GTGCAGGAAATAGGCAATTATGTTTTTCTAGAGAAATGAAATGTACTCACACGTATGGCT
TCTTGCATATCTTATTCGAGAAAAAAGATGGTCCAATCGAAAGTCCTACAACCACTGGGT
CTGTCTCCTTGACAAGCAAGTGTTTGATATTTAGATTATCCAATAAGTCACATTTTGCAA
TCGTTGGGTTTGAATTCAACCAATCATATTTATTTT