Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d038510_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:6:158911676:158913989:1 gene:Zm00001d038510 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein

Sequence

ATGTGGCGGCTCTCTTCGGCCGCGGCGCTCCTCCGACGCTCGCTCGCCGCCACCGCGCGC
CTCTCCGTTCCGAGGTATTTGATGCGTGCCTTGCTCGTGGTACAGCCCACTGCACGCACT
AATTCACCCATGGCTGTGCGTTGCCTACAACAGTGTGGTTCAGATAACACCGACGATGAC
AGGGTCATTCAGGCGTTTAAGCGGTGCTGCTCAACCAGTGCAAGCAGTGGTGTTTCAGAT
GCATCACCATGTGCTGCTTATGTCGAGAACCTCTGCAGATCTGGCAATCTTGTTGATGCT
GTTCGTGTTCTTCGACATCTGCATGACGAGCAGATCCATGTCGGCCTGCACACCTTTAAT
ATGTTACTGCAACACACAGCTGAAGCAAACATCTTTACTCTTTTTGCCAAGGTATTCAGG
TACCTGCTGCTTTCAGAACTTACTCCTGATTCAACTTCATATATGAATGTTGCATTGGCC
CTCCAGAAGTTGGATGACTGTGAAATGATACTCAAATTTGTAAGAGAAATTTTGGAAATC
ACACACTCTAGAGATGCTACAGTTATGAATCGCATTATCTTTGCCACAGCCAAATACGGA
CACATTGATAAAAGTTTGGTCATTTTCGAAGAGTTGAAGAAATATGAAACCAGCTTGGAT
GTTGTCACGTTCAACACTGTTTTGGACATGCTAGGGAAAGCTGGACGGGTGGACCAAATG
CTTGGTGAGGTGAAGCTAATGGAAAAACTTAGGCATTTTCCTGACATTGTGACATACAAT
ACACTAATAAACTGCATGCGAAGGCTTGGTAGACTAGATTTGTGCAAAAGGTTTGCTTTG
GAAATGGTAGAGAGAGGCATCACTCCAGATTTGAGGACATATACTGCACTAATTGATAGT
TTTGGACGGTCTGGCCATATTACTGAAGCCCTGGAAATGTTTCACGAGATGAAAAAGTCG
CACCAACCTTCAGTTTATGTCTACCGTGCATTGACAAGCAACTTGAAAAAGGCTGGACAT
TTTGAACTAGCACAAAAGCTCACCGAGGATATGAATTCAAGTGCTTCAGAGTTAATAGGC
CCAGAAGATTTCAAGCCAAATAATAAGGGTATAAGGTTTAGAAAAAATGGCTAA

Peptide Sequence

PEP ID

Zm00001d038510_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:6:158911676:158913989:1 gene:Zm00001d038510 transcript:Zm00001d038510_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein

Sequence

MWRLSSAAALLRRSLAATARLSVPRYLMRALLVVQPTARTNSPMAVRCLQQCGSDNTDDD
RVIQAFKRCCSTSASSGVSDASPCAAYVENLCRSGNLVDAVRVLRHLHDEQIHVGLHTFN
MLLQHTAEANIFTLFAKVFRYLLLSELTPDSTSYMNVALALQKLDDCEMILKFVREILEI
THSRDATVMNRIIFATAKYGHIDKSLVIFEELKKYETSLDVVTFNTVLDMLGKAGRVDQM
LGEVKLMEKLRHFPDIVTYNTLINCMRRLGRLDLCKRFALEMVERGITPDLRTYTALIDS
FGRSGHITEALEMFHEMKKSHQPSVYVYRALTSNLKKAGHFELAQKLTEDMNSSASELIG
PEDFKPNNKGIRFRKNG

Transcript Sequence

Transcript ID

Zm00001d038510_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:158911676:158913989:1 gene:Zm00001d038510 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein

Sequence

GAAGCACACCTCACGGCACGGCTGACGGGCCTTTCCGTTCCGCCGCTCGCATTCTCCCAA
CCCTCACCAACGGCTAAATGCTTGGAGGTATATCGTCGAACACCTGACTTGCGTTGCGTG
ACAGCGCACCCCGAGACCCCGATAAGATGTGGCGGCTCTCTTCGGCCGCGGCGCTCCTCC
GACGCTCGCTCGCCGCCACCGCGCGCCTCTCCGTTCCGAGGTATTTGATGCGTGCCTTGC
TCGTGGTACAGCCCACTGCACGCACTAATTCACCCATGGCTGTGCGTTGCCTACAACAGT
GTGGTTCAGATAACACCGACGATGACAGGGTCATTCAGGCGTTTAAGCGGTGCTGCTCAA
CCAGTGCAAGCAGTGGTGTTTCAGATGCATCACCATGTGCTGCTTATGTCGAGAACCTCT
GCAGATCTGGCAATCTTGTTGATGCTGTTCGTGTTCTTCGACATCTGCATGACGAGCAGA
TCCATGTCGGCCTGCACACCTTTAATATGTTACTGCAACACACAGCTGAAGCAAACATCT
TTACTCTTTTTGCCAAGGTATTCAGGTACCTGCTGCTTTCAGAACTTACTCCTGATTCAA
CTTCATATATGAATGTTGCATTGGCCCTCCAGAAGTTGGATGACTGTGAAATGATACTCA
AATTTGTAAGAGAAATTTTGGAAATCACACACTCTAGAGATGCTACAGTTATGAATCGCA
TTATCTTTGCCACAGCCAAATACGGACACATTGATAAAAGTTTGGTCATTTTCGAAGAGT
TGAAGAAATATGAAACCAGCTTGGATGTTGTCACGTTCAACACTGTTTTGGACATGCTAG
GGAAAGCTGGACGGGTGGACCAAATGCTTGGTGAGGTGAAGCTAATGGAAAAACTTAGGC
ATTTTCCTGACATTGTGACATACAATACACTAATAAACTGCATGCGAAGGCTTGGTAGAC
TAGATTTGTGCAAAAGGTTTGCTTTGGAAATGGTAGAGAGAGGCATCACTCCAGATTTGA
GGACATATACTGCACTAATTGATAGTTTTGGACGGTCTGGCCATATTACTGAAGCCCTGG
AAATGTTTCACGAGATGAAAAAGTCGCACCAACCTTCAGTTTATGTCTACCGTGCATTGA
CAAGCAACTTGAAAAAGGCTGGACATTTTGAACTAGCACAAAAGCTCACCGAGGATATGA
ATTCAAGTGCTTCAGAGTTAATAGGCCCAGAAGATTTCAAGCCAAATAATAAGGGTATAA
GGTTTAGAAAAAATGGCTAAGAGGTCACTGGTTGATTTTTGAGGCCTGAATTCTTTTTAT
TTGCGCTATGTGCTCACCCGTAGTCCCATACTGCTATAGATTCTGGCGTTGGTTGGAATG
TTTTGGAGAATGAAGCTCAAAGAATTAGAGAGATACAAAGCTTTAAGATGGCAGAAGCAT
GATGGTTAGGCAGACATGCAGTGATACAGGGTCAAGAGGACCTACTGACCTGAATGGGCA
TTTTTGCTGCATCATTTTAAGCAGCTCACGAGTCACGAGAAATTTGAAGACTCACCCATT
TAGACGACCTGAAAGGCTGCATCTGTGACTCATTGATCGCTTTATGTAACATAGGCACAC
TGCAGGATTTGGCTGTGTGCCTGTGACATAGGCGAATATCATGCTAGGCAGAAACATGAA
AAACTACTGCTTCTGCAATTAGTTTTTTTCCTGTGAATCTTTAGGCATGAAAAGGGACAA
GTTTCCATATTTTCTCCGTTTCTTTACCCTTGTAATCAGAGAGTGTATAACGTACTATGA
GTTGACGAAGTTCAATTTATTATCTTAGCTATTCGATCGTACTATGTACTCCCTCTGTCC
GAAAATAAAATTTGTTTTAGAGATTTATTGAATTCACACAATATTTG