Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d038478_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:6:158330439:158331059:1 gene:Zm00001d038478 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative RING zinc finger domain superfamily protein%3B RING-H2 finger protein ATL5A

Sequence

ATGGACCGCCGGGACTCCTCCGAGGCGCCGGGGCCGGCCGTGAACGGCACTGGCGGCGTC
GGAGGCGCGGGCGCGGCGGCGCCCGGGGTCGTCGACGCGACCTTCGACACCAACACGGTG
ATCCTGCTGGCGGCGCTGTTCCTGGCGCTGCTGCTCGCCATCGCGCTCAACTCGCTGGCC
AGGTTCGCGCTCTGGTGCGGAGGCCGGGCCGCGGCCGGGGGCGGCGAGGTGGCGGCGTCG
CCGAGCGTCGCCGCGTCGTCCTGCGCGGGCGTCCGGGGCGGGATCAAGAAGCGCGCGCTG
CGGAGCATCCCCGTGGAGGTTTACGTCGGCGGGGATGCGAAAGACGACGAGGAGGAGGGG
GCCGGGAGCGGGGACGTGTGCGCCATCTGCCTCGGCGAGTTCGCGGACGGCGAGAAGGTG
CGCGTGCTGCCGCGGTGCGGCCACGCGTTCCACGTCCCGTGCGTCGACGCCTGGCTGCTG
TCCCGCGGCTCGTGCCCGACGTGCCGCCGCCCCGTCATGGACGCCAAGCCTGCCAGTGCC
AGTGCCACAGGCGGCAGGGGAGTGGCCCAGCAGAGCGCCCGCCGCCCGGACAGCGACACC
GTCGCCGTGGTCATTGCGTGA

Peptide Sequence

PEP ID

Zm00001d038478_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:6:158330439:158331059:1 gene:Zm00001d038478 transcript:Zm00001d038478_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative RING zinc finger domain superfamily protein%3B RING-H2 finger protein ATL5A

Sequence

MDRRDSSEAPGPAVNGTGGVGGAGAAAPGVVDATFDTNTVILLAALFLALLLAIALNSLA
RFALWCGGRAAAGGGEVAASPSVAASSCAGVRGGIKKRALRSIPVEVYVGGDAKDDEEEG
AGSGDVCAICLGEFADGEKVRVLPRCGHAFHVPCVDAWLLSRGSCPTCRRPVMDAKPASA
SATGGRGVAQQSARRPDSDTVAVVIA

Transcript Sequence

Transcript ID

Zm00001d038478_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:158330439:158331059:1 gene:Zm00001d038478 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative RING zinc finger domain superfamily protein%3B RING-H2 finger protein ATL5A

Sequence

ATGGACCGCCGGGACTCCTCCGAGGCGCCGGGGCCGGCCGTGAACGGCACTGGCGGCGTC
GGAGGCGCGGGCGCGGCGGCGCCCGGGGTCGTCGACGCGACCTTCGACACCAACACGGTG
ATCCTGCTGGCGGCGCTGTTCCTGGCGCTGCTGCTCGCCATCGCGCTCAACTCGCTGGCC
AGGTTCGCGCTCTGGTGCGGAGGCCGGGCCGCGGCCGGGGGCGGCGAGGTGGCGGCGTCG
CCGAGCGTCGCCGCGTCGTCCTGCGCGGGCGTCCGGGGCGGGATCAAGAAGCGCGCGCTG
CGGAGCATCCCCGTGGAGGTTTACGTCGGCGGGGATGCGAAAGACGACGAGGAGGAGGGG
GCCGGGAGCGGGGACGTGTGCGCCATCTGCCTCGGCGAGTTCGCGGACGGCGAGAAGGTG
CGCGTGCTGCCGCGGTGCGGCCACGCGTTCCACGTCCCGTGCGTCGACGCCTGGCTGCTG
TCCCGCGGCTCGTGCCCGACGTGCCGCCGCCCCGTCATGGACGCCAAGCCTGCCAGTGCC
AGTGCCACAGGCGGCAGGGGAGTGGCCCAGCAGAGCGCCCGCCGCCCGGACAGCGACACC
GTCGCCGTGGTCATTGCGTGA