Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d038459_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:6:157664955:157677436:1 gene:Zm00001d038459 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative VHS/GAT domain containing family protein
Sequence	ATGTCGTTCAAATCAACAAAAGCTCATGCAGTTTGTCAGTTCGTCAGGGATGAAGACCTG CTAAAGCAAGGACTAGAATTAAATGATCGCTTACAGAGTGTCCTCACAAGACATGATGCT ATTGCTTCTGGTTCTCCATTACCAGTTGAGACACCGATTAGAGAACCACAGAGAGAGGAT CCAAATCCTGAGCCATCTACACCAATTACACATGATAATAAGGCTCAAGTTGAAGAGGAT GAAGATGATGAGTTTGCTCAAATAGCACGAAGGTACAACAAATCTGTGATATGCGGTGAT GAGGCATCATCGAGTGCTGGTGATCAACCCCTGGTACCTGTTTTTTTTTTTCTCGAAGTT TCTTCGGTTGAGAGCAATGCAATAGTACCTCTCGGCGCAACTTCTGTTAGTGGAACCAGG ACGAAGGAGCAGGATATGATTGACCTTCTCAGCCTCACCTTGTACAGTCCTGAATCATCT GCAGACTCTTCAACTCAGAACCAAAATGGGAGTCAGCCGAGTGTCACATCAAATGGACCA GAAACACTGCCAAGCTATCAGCCTGCTGTGGCGAACGGGGCAAATTACCCTGCCAACACC CAGGTTTATCCAACAAATCAGGGATATGTTCCATACAATAACTATGTGGCACCATGGGCC CAAACGGGACCGGTTGCACAGCCTGGGGCATATTCGACTCAACCCCAACAATATGTGTCG AGCAATCCAGCACCCCCATGGGCTATGCCTGCAAGTGCCAATTCAGCTAATCCTTTCCAG CCTGTGACATACCAAACGCCAAACACTCCTGCTGCTTCTGTTGCCCCTTCAGCTGCTCCA TCAGCGCAACATGTTCCATCTCCAGCACCAACACCGGTGCAAAGTTACAACTTCTCTATT CCTCAAACATACACTGGTTCGAACGTGGCTACAAATGCTCGGGTGAAAGGGAATCAGCGG CCAAAAGAATCTCCAGTGGCAGCAGCCAGACCATATTACATGCCGGACAACTTGTTTGGA GACCTGATCGACGTGAAGAGTTTTGGCGCCGGAAGCAAGATCAGCAGGTCTACCAGCATG CCGAGTCCAAAGGGTGGTGGCCAGCCTATGATCGGTAGAAACAAATAG

Peptide Sequence

PEP ID	Zm00001d038459_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:6:157664955:157677436:1 gene:Zm00001d038459 transcript:Zm00001d038459_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative VHS/GAT domain containing family protein
Sequence	MSFKSTKAHAVCQFVRDEDLLKQGLELNDRLQSVLTRHDAIASGSPLPVETPIREPQRED PNPEPSTPITHDNKAQVEEDEDDEFAQIARRYNKSVICGDEASSSAGDQPLVPVFFFLEV SSVESNAIVPLGATSVSGTRTKEQDMIDLLSLTLYSPESSADSSTQNQNGSQPSVTSNGP ETLPSYQPAVANGANYPANTQVYPTNQGYVPYNNYVAPWAQTGPVAQPGAYSTQPQQYVS SNPAPPWAMPASANSANPFQPVTYQTPNTPAASVAPSAAPSAQHVPSPAPTPVQSYNFSI PQTYTGSNVATNARVKGNQRPKESPVAAARPYYMPDNLFGDLIDVKSFGAGSKISRSTSM PSPKGGGQPMIGRNK

Transcript Sequence

Transcript ID	Zm00001d038459_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:157664955:157677436:1 gene:Zm00001d038459 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative VHS/GAT domain containing family protein
Sequence	CCCCCGTTCTCCGTTCCACATCGCGTGCGCATTGAGACGACGAGTTTCTAGAGCGCCGTA CCGCGCACGGCTCCCGAGCCCCACCGCAAAGCGCCGGAATCGTGAGCGCGTCCGGCCTCG CCTGCTCCGCGGCGAGAGGCGGCCGAGGAGGACGGGCGATGTACCCGGTGGTGACGGGCA CGCCGCCGGCGCGGCTGCCGGCGGCGTCGCGGGTGGACAAGGCCACGAGCCACCTGCTGC AGGGCCCCGACTGGGCCGTCAACCTCGAAATCTGCGACACCCTCAACGCCGACCGCTGGC AAACGAAGGATATAGTAAAAGCTGTGAAGAAGCGATTGCAGCATAAGGATCCAAAAGTTA AATTCTTTACTTTGACGTTATTGGAGACAATGATGAAGAACTGTGGTGAATATGTTCATT TTGAAGTTGTTGATCAGCATATTTTACAAGAGATTGTTAAAATTGTCCATGATATGCAAG TGAGGGATAAGGCTTTGTTACTTCTGGATTCATGGCAAGAGGCATTTGGTGGACCTGGTG GCAAATATCCACAGTACTACTGGTCATACATTGAACTAAAGAGAGGGCAGGAGTAATGTT CCCACAACGTCCTGTAGATGCTCCTCCAATATTTACTCCTCCTGCAACACATCAGGCATA TGGTTCACCTAGATATCCTTCTGGAAGTCTAAATGAGAGAATCACATCTGATGCTGGAAC GTTGAGCTTTGAGGGCTTGAATAATATTAGAAATGCAACGGAACTGCTGTATGATATGGT GAATGCTTTGAACCCTGCTGACCGCATGACAGTTAAAGATGAAATTATTGCAGATCTTGT AAATCAATGTCGTTCAAATCAACAAAAGCTCATGCAGTTTGTCAGTTCGTCAGGGATGAA GACCTGCTAAAGCAAGGACTAGAATTAAATGATCGCTTACAGAGTGTCCTCACAAGACAT GATGCTATTGCTTCTGGTTCTCCATTACCAGTTGAGACACCGATTAGAGAACCACAGAGA GAGGATCCAAATCCTGAGCCATCTACACCAATTACACATGATAATAAGGCTCAAGTTGAA GAGGATGAAGATGATGAGTTTGCTCAAATAGCACGAAGGTACAACAAATCTGTGATATGC GGTGATGAGGCATCATCGAGTGCTGGTGATCAACCCCTGGTACCTGTTTTTTTTTTTCTC GAAGTTTCTTCGGTTGAGAGCAATGCAATAGTACCTCTCGGCGCAACTTCTGTTAGTGGA ACCAGGACGAAGGAGCAGGATATGATTGACCTTCTCAGCCTCACCTTGTACAGTCCTGAA TCATCTGCAGACTCTTCAACTCAGAACCAAAATGGGAGTCAGCCGAGTGTCACATCAAAT GGACCAGAAACACTGCCAAGCTATCAGCCTGCTGTGGCGAACGGGGCAAATTACCCTGCC AACACCCAGGTTTATCCAACAAATCAGGGATATGTTCCATACAATAACTATGTGGCACCA TGGGCCCAAACGGGACCGGTTGCACAGCCTGGGGCATATTCGACTCAACCCCAACAATAT GTGTCGAGCAATCCAGCACCCCCATGGGCTATGCCTGCAAGTGCCAATTCAGCTAATCCT TTCCAGCCTGTGACATACCAAACGCCAAACACTCCTGCTGCTTCTGTTGCCCCTTCAGCT GCTCCATCAGCGCAACATGTTCCATCTCCAGCACCAACACCGGTGCAAAGTTACAACTTC TCTATTCCTCAAACATACACTGGTTCGAACGTGGCTACAAATGCTCGGGTGAAAGGGAAT CAGCGGCCAAAAGAATCTCCAGTGGCAGCAGCCAGACCATATTACATGCCGGACAACTTG TTTGGAGACCTGATCGACGTGAAGAGTTTTGGCGCCGGAAGCAAGATCAGCAGGTCTACC AGCATGCCGAGTCCAAAGGGTGGTGGCCAGCCTATGATCGGTAGAAACAAATAGGCCTCT GCTGTTTAAGATAGGGATGAGCATATATTTAGCTGGTAGCCACTGTCGTTTGGTTTGATG TAAATTTGCTGTCTTTTTTCACGTGTCAATTTGCGGATTTGTTACTTTGGTCAATTTCGG AGTTGCTGCATGTTTAACT