Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d038442_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:6:157367707:157368450:-1 gene:Zm00001d038442 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5
Sequence	ATGGATCCCTCGGGGCCAGCCGGGCCGTCCTCGGCGGCGGGGAGCGGCGACGACGCGCTC GCGCCGCCGCAGCATCAGGTCCAGCCGCTGGCTCAGGCGCAGCCGCAGCCGCAGCAGGCC GCTCCGCCTCCGCAGCTCAGCAGGTACGAATCGCAGAAGCGGCGGGACTGGAACACGTTC CTGCAGTACCTGCGGAACCACCGGCCGCCGCTCACGCTGGCGCGGTGCAGCGGCGCGCAC GTCATCGAGTTCCTCAAGTACCTGGACCAGTTCGGCAAGACCAAGGTGCACGCCGCCGGG TGCGCCTACTTCGGCCAGCCTAACCCGCCGGCGCCCTGCCCGTGCCCGCTGCGCCAGGCC TGGGGGTCCCTCGACGCGCTCATCGGCCGCCTGCGCGCCGCGTACGAGGAGAGCGGCCAC GCGCCGGAGTCCAACCCCTTCGCGGCGCGCGCCGTGCGGATCTACCTCCGCGACGTCCGC GACGCGCACGCCAAGGCGCGGGGCATACCCTACGAGAAGAAGAGCCGCAAGCGCAAGCAG CCGCCGGCGGCGGCCACAGGAGAAGCGTCGTCGTCTTCGTCCTCGGCCGCGGCAGCGCGG GAGGCCGCTGCCGCCGCGAGCGCCGGGGACGGGTCCAGCAGTGGCAGCGTGGCGGCGAAA GCTGCACCGACCACCGGCGGCGGCCAGGGAAGCGCCACTACTACAGCCGCTCCTGCACCG ACCAGCACGTCCCGAGTACAGTAG

Peptide Sequence

PEP ID	Zm00001d038442_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:6:157367707:157368450:-1 gene:Zm00001d038442 transcript:Zm00001d038442_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5
Sequence	MDPSGPAGPSSAAGSGDDALAPPQHQVQPLAQAQPQPQQAAPPPQLSRYESQKRRDWNTF LQYLRNHRPPLTLARCSGAHVIEFLKYLDQFGKTKVHAAGCAYFGQPNPPAPCPCPLRQA WGSLDALIGRLRAAYEESGHAPESNPFAARAVRIYLRDVRDAHAKARGIPYEKKSRKRKQ PPAAATGEASSSSSSAAAAREAAAAASAGDGSSSGSVAAKAAPTTGGGQGSATTTAAPAP TSTSRVQ

Transcript Sequence

Transcript ID	Zm00001d038442_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:157367707:157368450:-1 gene:Zm00001d038442 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5
Sequence	ATGGATCCCTCGGGGCCAGCCGGGCCGTCCTCGGCGGCGGGGAGCGGCGACGACGCGCTC GCGCCGCCGCAGCATCAGGTCCAGCCGCTGGCTCAGGCGCAGCCGCAGCCGCAGCAGGCC GCTCCGCCTCCGCAGCTCAGCAGGTACGAATCGCAGAAGCGGCGGGACTGGAACACGTTC CTGCAGTACCTGCGGAACCACCGGCCGCCGCTCACGCTGGCGCGGTGCAGCGGCGCGCAC GTCATCGAGTTCCTCAAGTACCTGGACCAGTTCGGCAAGACCAAGGTGCACGCCGCCGGG TGCGCCTACTTCGGCCAGCCTAACCCGCCGGCGCCCTGCCCGTGCCCGCTGCGCCAGGCC TGGGGGTCCCTCGACGCGCTCATCGGCCGCCTGCGCGCCGCGTACGAGGAGAGCGGCCAC GCGCCGGAGTCCAACCCCTTCGCGGCGCGCGCCGTGCGGATCTACCTCCGCGACGTCCGC GACGCGCACGCCAAGGCGCGGGGCATACCCTACGAGAAGAAGAGCCGCAAGCGCAAGCAG CCGCCGGCGGCGGCCACAGGAGAAGCGTCGTCGTCTTCGTCCTCGGCCGCGGCAGCGCGG GAGGCCGCTGCCGCCGCGAGCGCCGGGGACGGGTCCAGCAGTGGCAGCGTGGCGGCGAAA GCTGCACCGACCACCGGCGGCGGCCAGGGAAGCGCCACTACTACAGCCGCTCCTGCACCG ACCAGCACGTCCCGAGTACAGTAG