Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d038409_T007
CDS Infomation	cds chromosome:B73_RefGen_v4:6:156603402:156608109:-1 gene:Zm00001d038409 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-dependent protein kinase 13
Sequence	ATGTCGGCGCCTGGATTCGATGACCCCCAGCTTCCGCCGCTGCGGCTGCGCGCCTCGTGC GGCGGCAGCGGCGGCGTGATCGCCAGCCCACGCTCCTGCTCCTCCTCTGATACCTTCGTC AGCATGCGTTCCACGCCCTCAGCCTCAGGTATGCCGAATCTGTGCGGCGGGCTACGGTCT CCACCTCGCACGCCGTCGGAGGCGTCTTCGTCGGAGATGGAGTTCGGGACGGCCCGCGAG TACGACACCACTGATCCGTTCTTCAGTGACTACTGGCTGTACGACAACCACCTGTTCCAC AGCAAGCTAGAGAGCGACGGCAGCGAAGGGGAGGACAAGTTCGTTGTTGGTCCTGACGTC AGCTTGCAGCGGAGTGAGGTGCGGGAGCTTGGCGACGGATGCGGTCGCGGGCACGTACGT ACAGACCGCAATGCGGACTCTGATGGGTGCACAGATGCGAATGCTTGCTCGTCGCCACCT TGCGGTTGCTGCTATAATGAGGAGTTGGTGGTGAGAGATTCTTGCTCCGCTGTTTATGGG AGGTGTCAGATCATGGAGGACCACGCGGAGGGGCTTGATGAGTGCGTTGCAGAAGCGTTC CGGTTCAGACTGAATGCGTTTGTTGATGCTGGCGACCAGTCAGTGGCTTCCAAGAAAGGA CAGGACGACTGGCTGGATCTTACTGTTCTGGAGAAGGAACTTCAAATGCTTACTCCGCAC TTGGCTGATGCAGATGCTCTTGAGAATACTGGACTTGAAGATGACTTGAGAGGGAATATC AACCTAGATGTCTGTATGGTAACAAACGAGAAAAATGCTGATGGCAAAGAATTTCTAAAA GATACTTACTGCATACATTCTTTACCTGAGAGTGCAATCCCTTTTGATGTTTATGGTGTG GAAGACTTCAAGGTAGAAGATACATATGTTCAAAACCCTACTACTCACAAATTTCAGGAA GATCCAAAAACTGATCCTGCAGTCTCTAAGTTTCAGCAGGAGTATGAGGTATTTGACCTG AAAATTTTCCACCGGAAGAGCAGGACAGGCTTTGAGGAAAACAAAGAATTCGCTATTGTC ATGGATTCAGTTGTAGCTGGAAGATATCGTATCACTGAGTATCTTGGTTCTGCTGCATTC AGCAAGGTTGTCCGGGCACACGACCTCCACACTGGAGTTGATGTATGCCTTAAAATAATA AAAAATGACAAGGATTTCTTTGACCAGAGTTTGGATGAGATAAAGCTCCTCAAGTTTGTC AATAAATATGATCCAGATGATGATCATCATATACTGCGTCTCTATGATTATTTTTATTAT CAGGAACATCTCTTCATTGTCACTGAATTACTACGTGCAAACCTTTATGAGTTTCAGAAA TATAATCAGCAGTCTGGTGATGAGGTGTACTTTTCACTGCCCAGAATACAGGCTATAGCT CAACAATGTTTGGAGGCTTTGGTGTACTTGCATCATCTAAACATAGTTCACTGTGATCTG AAACCAGAGAATATCCTTCTGAAGAGCTACAGCAGATGTGAAATCAAAGTCATTGATCTT GGAAGCAGCTGCTTCTTGTCAGACAACTTAAACTTATATGTTCAGTCACGTTCTTATCGA TCTCCTGAGGTCATCCTGGGTTTGCCATATGATCAGAAAATTGACATTTGGTCTCTTGGC TGCATCTTAGCTGAACTGTACACTGGGGAAGTGCTCTTTCCTAATGAATCAGTACCAATC ATTCTTGCTCGTATGATTGGGACAATTGGTCCAATTGATATGGAAATGCTTGCCTCAGGA CAGGAGACCCAGAAGTACTTCACAGATGACTATGACCTTTTCCACAAGGACGAGGTAATT ATTGGATGA

Peptide Sequence

PEP ID	Zm00001d038409_P007
PEP Infomation	pep chromosome:B73_RefGen_v4:6:156603402:156608109:-1 gene:Zm00001d038409 transcript:Zm00001d038409_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-dependent protein kinase 13
Sequence	MSAPGFDDPQLPPLRLRASCGGSGGVIASPRSCSSSDTFVSMRSTPSASGMPNLCGGLRS PPRTPSEASSSEMEFGTAREYDTTDPFFSDYWLYDNHLFHSKLESDGSEGEDKFVVGPDV SLQRSEVRELGDGCGRGHVRTDRNADSDGCTDANACSSPPCGCCYNEELVVRDSCSAVYG RCQIMEDHAEGLDECVAEAFRFRLNAFVDAGDQSVASKKGQDDWLDLTVLEKELQMLTPH LADADALENTGLEDDLRGNINLDVCMVTNEKNADGKEFLKDTYCIHSLPESAIPFDVYGV EDFKVEDTYVQNPTTHKFQEDPKTDPAVSKFQQEYEVFDLKIFHRKSRTGFEENKEFAIV MDSVVAGRYRITEYLGSAAFSKVVRAHDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKFV NKYDPDDDHHILRLYDYFYYQEHLFIVTELLRANLYEFQKYNQQSGDEVYFSLPRIQAIA QQCLEALVYLHHLNIVHCDLKPENILLKSYSRCEIKVIDLGSSCFLSDNLNLYVQSRSYR SPEVILGLPYDQKIDIWSLGCILAELYTGEVLFPNESVPIILARMIGTIGPIDMEMLASG QETQKYFTDDYDLFHKDEVIIG

Transcript Sequence

Transcript ID	Zm00001d038409_T007
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:156603402:156608109:-1 gene:Zm00001d038409 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-dependent protein kinase 13
Sequence	GCTGTTGGATCCCGTGCCGCCGCCTCGCCTCGCCCGTTCTCGGTACGCCAGCGACCCCGT CACTGTAGCTGCGTGCCTGCGCGGCCCTGCGCTTGCTTCGCCCTCGCTTCGCTCCAAACG ATAGAGCTGGGGCAGGCTGAGCGACCGCGAGCTTGACCCGGGCGCACGTCGGCTCGCACT GTCGCACCCAGCCATGTCGGCGCCTGGATTCGATGACCCCCAGCTTCCGCCGCTGCGGCT GCGCGCCTCGTGCGGCGGCAGCGGCGGCGTGATCGCCAGCCCACGCTCCTGCTCCTCCTC TGATACCTTCGTCAGCATGCGTTCCACGCCCTCAGCCTCAGGTATGCCGAATCTGTGCGG CGGGCTACGGTCTCCACCTCGCACGCCGTCGGAGGCGTCTTCGTCGGAGATGGAGTTCGG GACGGCCCGCGAGTACGACACCACTGATCCGTTCTTCAGTGACTACTGGCTGTACGACAA CCACCTGTTCCACAGCAAGCTAGAGAGCGACGGCAGCGAAGGGGAGGACAAGTTCGTTGT TGGTCCTGACGTCAGCTTGCAGCGGAGTGAGGTGCGGGAGCTTGGCGACGGATGCGGTCG CGGGCACGTACGTACAGACCGCAATGCGGACTCTGATGGGTGCACAGATGCGAATGCTTG CTCGTCGCCACCTTGCGGTTGCTGCTATAATGAGGAGTTGGTGGTGAGAGATTCTTGCTC CGCTGTTTATGGGAGGTGTCAGATCATGGAGGACCACGCGGAGGGGCTTGATGAGTGCGT TGCAGAAGCGTTCCGGTTCAGACTGAATGCGTTTGTTGATGCTGGCGACCAGTCAGTGGC TTCCAAGAAAGGACAGGACGACTGGCTGGATCTTACTGTTCTGGAGAAGGAACTTCAAAT GCTTACTCCGCACTTGGCTGATGCAGATGCTCTTGAGAATACTGGACTTGAAGATGACTT GAGAGGGAATATCAACCTAGATGTCTGTATGGTAACAAACGAGAAAAATGCTGATGGCAA AGAATTTCTAAAAGATACTTACTGCATACATTCTTTACCTGAGAGTGCAATCCCTTTTGA TGTTTATGGTGTGGAAGACTTCAAGGTAGAAGATACATATGTTCAAAACCCTACTACTCA CAAATTTCAGGAAGATCCAAAAACTGATCCTGCAGTCTCTAAGTTTCAGCAGGAGTATGA GGTATTTGACCTGAAAATTTTCCACCGGAAGAGCAGGACAGGCTTTGAGGAAAACAAAGA ATTCGCTATTGTCATGGATTCAGTTGTAGCTGGAAGATATCGTATCACTGAGTATCTTGG TTCTGCTGCATTCAGCAAGGTTGTCCGGGCACACGACCTCCACACTGGAGTTGATGTATG CCTTAAAATAATAAAAAATGACAAGGATTTCTTTGACCAGAGTTTGGATGAGATAAAGCT CCTCAAGTTTGTCAATAAATATGATCCAGATGATGATCATCATATACTGCGTCTCTATGA TTATTTTTATTATCAGGAACATCTCTTCATTGTCACTGAATTACTACGTGCAAACCTTTA TGAGTTTCAGAAATATAATCAGCAGTCTGGTGATGAGGTGTACTTTTCACTGCCCAGAAT ACAGGCTATAGCTCAACAATGTTTGGAGGCTTTGGTGTACTTGCATCATCTAAACATAGT TCACTGTGATCTGAAACCAGAGAATATCCTTCTGAAGAGCTACAGCAGATGTGAAATCAA AGTCATTGATCTTGGAAGCAGCTGCTTCTTGTCAGACAACTTAAACTTATATGTTCAGTC ACGTTCTTATCGATCTCCTGAGGTCATCCTGGGTTTGCCATATGATCAGAAAATTGACAT TTGGTCTCTTGGCTGCATCTTAGCTGAACTGTACACTGGGGAAGTGCTCTTTCCTAATGA ATCAGTACCAATCATTCTTGCTCGTATGATTGGGACAATTGGTCCAATTGATATGGAAAT GCTTGCCTCAGGACAGGAGACCCAGAAGTACTTCACAGATGACTATGACCTTTTCCACAA GGACGAGGTAATTATTGGATGATATGCAAGATTACCAACATAACTTTGCTTCAGTATGCA CTAGTTGAGGCGCAGTAAGACAATTTAGCACTGCACTTGTCCTTAAAGGCAGTAGTTTGT TATCACCATGAGATCTTTGGCATAAGAGTTTTAGTTGTTTGTTCTTTGTGCAATTTTCAT GCATCACTGGATACTTATTTTTCCTATTACTTTTCCTGCTAAAAAATA