Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d038396_T014
CDS Infomation	cds chromosome:B73_RefGen_v4:6:156307871:156312236:1 gene:Zm00001d038396 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative PWWP domain family protein
Sequence	ATGGAAAGATCTATCATCCATGTCGATGAGAAGATGGTTGATGAGTTGAAGCCCACTGCA CTTGTTTTGACCTTTGGCAGGTCAGCGTCTATTCCTTCAGAACTGGATCTTGTTAAGATG TTCAGTCTCTATGGTCCACTGAAAGAAAGGGGGACAAAAGTACATAGGGAAACAAATACT GTTAAGGTTGTCTTCAAGAAACGTGTCGATGCTGAAAGGGCTTTTAGTGCTGCAGGCAAG TATAGCACTTTTGGACCTTCGCTTCGAAGTTACCGTCTTGTCAGTATGCCACTTTCTCCA GAGACACAATCAGCAAATAATCCTGAAAATCATGGCTTGGAGATTCCAGGTTTGAATATG TCCGAAGCTCCTAAGGATTCCATGGAAGTTGACCTGGTGCAGAAAACAGATAAAGTAAAA GTTACAGGAGAACTGTCATCTGAAGAAGTTGAGACTGTAAGGCAAACATGTCTAGTGGAA GCTGCAGACAGTACATTTGTCAGTGAAGTTGACAGGCTTGAGAAAGCAGGAAATATTGAT GCTGAGCTAATTGTCCATGTGAATCAGATTGGGGAAGGTGCAGAAGCTGCATCTGTATCT GAAGAGTCATCTCAGCAAGTGGGTGACATTGAGCAAGCTTACACTCAAAAGGCAGCGTCA GTCAGTGATCTACCCACAGAGATAGAAACCTTACATTCTGATGCTATAATAAAAGAGTTG CCTCAGAAGGCTCCAGATAATATGCAAACTGATATAGCCACGGCCCCAAAACAGAGTCAC AATCCAGGAGATAATGCTGTATTTGAAGCTGTCACTGAAGTGCCAAGTACTGCACAAGAT CATAGTGAGGATGATGTTGGGGATGAAGTTCCAGAAGAGCACACTGTATTTCCTGTGTTA CAAAGTCAAACCCCTGGTGAGAAGCTAGTGGGGCAATCTGAAACTGAACAAAAAGTGGGA CCTGAAGATCCAAAGTCACAAGCTGAAAATTTGACTGTTGAACCTGTCGTACAAGGTGCA GTCGAGCAAGTAGAAATTGAACTGGAATCCAAAACTACTGTTGAAGTGTCATGCGAACAA GGCTATAGTATTGAGCAGACTGTTAACATGGAAGCTGTAATTGAAGCATCAGGTGGACAA CTTGAGGTGGGAAGACGAATTTCAGAAGATGAATCTATGGCTGATGCAAATATTGAGCAC TCTATGGTCATGGTTGATGAAACTGTGGAGGCAAAAGTAGTACCACTCGAGGAGAGTACA GAGAATAATGCTGCTACCATAGGAGTAGTTGAGGAGACAGCTGAAGGTGAAACTAAGGAG GAAGCACCAGACGAGAAGGGGAAAATAGAAAATAATGAAGATGCTGACAAATTAGCTGGA GAGACCAGGGCAGGTGAAATTACAGTTGAGGCACCAGATGAGAAAACAGAAATTAAAGCA GATGCTGACACACCAGCTGGTGAGACCAAAGAATGTGAAATTACAGTAGAGGCACCAGAT GAGAAAATAGCAAACAAAGGTATTGTTGAACCAATAATCAGGGAGATAACTGAAGATCAA ACTGCAGCTGGAGAACCAGATGAAGAAGCTACAACAACTGAGGAAACGGTAGAGGATGTT AAGGTGCTAGATGATAAGTCTACAGCAGATGGGAAACCTGTAGAGAATGCCACAGTCGCG ACAAATGAGGATTCAACAACAGTTGAGAATACTCTGAAGGATGCAATGGTTGCGCCACCA GGTACAAATACCACCAACGCCGAAGAAACTGCTCTGGGTGCCACAGTTAAAGCACTAGAT GAGGATGCTCTAGCAGTGGAGAAGACTATAGAGGATACCTCGGTTGAGGCATCAGATGTA CAAGCAGGCAGGTGCAAGTGA

Peptide Sequence

PEP ID	Zm00001d038396_P014
PEP Infomation	pep chromosome:B73_RefGen_v4:6:156307871:156312236:1 gene:Zm00001d038396 transcript:Zm00001d038396_T014 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative PWWP domain family protein
Sequence	MERSIIHVDEKMVDELKPTALVLTFGRSASIPSELDLVKMFSLYGPLKERGTKVHRETNT VKVVFKKRVDAERAFSAAGKYSTFGPSLRSYRLVSMPLSPETQSANNPENHGLEIPGLNM SEAPKDSMEVDLVQKTDKVKVTGELSSEEVETVRQTCLVEAADSTFVSEVDRLEKAGNID AELIVHVNQIGEGAEAASVSEESSQQVGDIEQAYTQKAASVSDLPTEIETLHSDAIIKEL PQKAPDNMQTDIATAPKQSHNPGDNAVFEAVTEVPSTAQDHSEDDVGDEVPEEHTVFPVL QSQTPGEKLVGQSETEQKVGPEDPKSQAENLTVEPVVQGAVEQVEIELESKTTVEVSCEQ GYSIEQTVNMEAVIEASGGQLEVGRRISEDESMADANIEHSMVMVDETVEAKVVPLEEST ENNAATIGVVEETAEGETKEEAPDEKGKIENNEDADKLAGETRAGEITVEAPDEKTEIKA DADTPAGETKECEITVEAPDEKIANKGIVEPIIREITEDQTAAGEPDEEATTTEETVEDV KVLDDKSTADGKPVENATVATNEDSTTVENTLKDAMVAPPGTNTTNAEETALGATVKALD EDALAVEKTIEDTSVEASDVQAGRCK

Transcript Sequence

Transcript ID	Zm00001d038396_T014
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:156307871:156312236:1 gene:Zm00001d038396 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative PWWP domain family protein
Sequence	CAGAACAATGTGCCTGGTGACATGGAGGAAAGCTCCGAGGAACATGAAGGTGATGGAGCA CCTGTAGTTGACCAGCCCAATAACACATCTGAAATGCTCCCACAAACAGGAGAGCAGTTT CCTGACAGTGGAAATAGCCCAGACAGCAACTTAGAGGCTGCTAGTCTGGGGAATGTTGAT CAGGGTGCTAGATACCGCCTCCCACCTCTTGATAAAGGCAGGTTTCAAGTTGCTGATCTT GTCTGGGGTAAAGTGAAAAGTCATCCTTGGTGGCCTGGTGAAATTTTTGATCCAACAGAT GCATCTGAATTGGCGCTGAAGCATCGGAAAAAGGGCAGCCACTTGGTAGCTTATTTTGGT GACAGTACTTTTGCATGGTGCGATGAATCCCAGTTGAAGCCTTTTGTAACAAATTATTCA CAAATGGAGAAGCAGAGCAGTTCAGATGGCTTTGTTGGGTCAGTTAATAATGCACTTGAA GAACTGTCAAGGCGGGTACTGTCAGGTTTGAGCTGCTCTTGTTTGGCAGAAGAGCTTGCT GATAATGGTATGTCATATACGGTTGATAATGCTGGGCTCAAGGATGGAGTTACTTGTTCT GCAGTTAATCGGCCTGAGATCTTGAACTGTTTCAGTCCAGAAAACCTTCTTAATTATATT AAGGAGTTAGCTCTATTTCCTGGCCAGGGAGGTGATCTATTGGAGTTAGTGATAGCGTGT TCTCAACTTACATCTTTCTATCGATCTAAGGGATGTCCTGAACTTGCATCATTTCAAACT AGTGATGCGTGGGTTGAGGATGATCTGGATGGTATAGACACTTTGTCCACCCAGAATGTA ATGGTGGAGGAACCTGTGATTAACGAAGTGCAGCCTACTCAAGATAAGCCCAAAAGGGGC AGGGGGAGACCTCGGAAACAAAAGGCTGGTCATGACCAGGTGGTGATGGAGAAAAGGAGC ACATCTAATCAGGTCAATGATACTAGCTACAATGAGAAGAAAAGAAACCTCAAATCATTT GAAGATTCAGAGAAGTCATCAGCTCCAACTGGTGGTGGTTCTTTCAAGATTGGTGAGTGT ATTCGGCGAGCTGCAAGCCAGCTGACAGGATCTTCATCTATTATGAAGGCTCAGAATGAA CCAACAGTCTATAATAACGCTGCTGAAGGAGAGAATGGGGAATTTGATGTCTCTAGTGAT GATGCTGGTGATGAACTTACTGTGGAGAAACGAGCAAAAAGGAGGCGTCTGCACATAAAT CACGCTGCAGATCCCAGGGAATTACTGTCACAACTATGCTTGGTTGCAACAGAGCCAATG AATGGATATAGTTTCTCAGCAATGATAATCGGTTACTTCAACGATTACAGAAACTATATT GTTTCTACTACTACTGAAGCAAACATTGTTGATAAAGGTACATCTAGAAGAGGGAGGAAG AGAAAAGAAGTTATACCTTCTCCTGAGGTAGAGACAACGGATCATATGCAGGACTCGTAT TGTTCATGACCTAAAAAGAGAGAGTCCGACTACAAGGCCAAGACGGAAACGGAGATCCTC AAGACATGCATATATACCTTTGTCGGAACTTGGGGAGCCGGTTCCTAAAAAACAGATACA AGTGATGGAAAGATCTATCATCCATGTCGATGAGAAGATGGTTGATGAGTTGAAGCCCAC TGCACTTGTTTTGACCTTTGGCAGGTCAGCGTCTATTCCTTCAGAACTGGATCTTGTTAA GATGTTCAGTCTCTATGGTCCACTGAAAGAAAGGGGGACAAAAGTACATAGGGAAACAAA TACTGTTAAGGTTGTCTTCAAGAAACGTGTCGATGCTGAAAGGGCTTTTAGTGCTGCAGG CAAGTATAGCACTTTTGGACCTTCGCTTCGAAGTTACCGTCTTGTCAGTATGCCACTTTC TCCAGAGACACAATCAGCAAATAATCCTGAAAATCATGGCTTGGAGATTCCAGGTTTGAA TATGTCCGAAGCTCCTAAGGATTCCATGGAAGTTGACCTGGTGCAGAAAACAGATAAAGT AAAAGTTACAGGAGAACTGTCATCTGAAGAAGTTGAGACTGTAAGGCAAACATGTCTAGT GGAAGCTGCAGACAGTACATTTGTCAGTGAAGTTGACAGGCTTGAGAAAGCAGGAAATAT TGATGCTGAGCTAATTGTCCATGTGAATCAGATTGGGGAAGGTGCAGAAGCTGCATCTGT ATCTGAAGAGTCATCTCAGCAAGTGGGTGACATTGAGCAAGCTTACACTCAAAAGGCAGC GTCAGTCAGTGATCTACCCACAGAGATAGAAACCTTACATTCTGATGCTATAATAAAAGA GTTGCCTCAGAAGGCTCCAGATAATATGCAAACTGATATAGCCACGGCCCCAAAACAGAG TCACAATCCAGGAGATAATGCTGTATTTGAAGCTGTCACTGAAGTGCCAAGTACTGCACA AGATCATAGTGAGGATGATGTTGGGGATGAAGTTCCAGAAGAGCACACTGTATTTCCTGT GTTACAAAGTCAAACCCCTGGTGAGAAGCTAGTGGGGCAATCTGAAACTGAACAAAAAGT GGGACCTGAAGATCCAAAGTCACAAGCTGAAAATTTGACTGTTGAACCTGTCGTACAAGG TGCAGTCGAGCAAGTAGAAATTGAACTGGAATCCAAAACTACTGTTGAAGTGTCATGCGA ACAAGGCTATAGTATTGAGCAGACTGTTAACATGGAAGCTGTAATTGAAGCATCAGGTGG ACAACTTGAGGTGGGAAGACGAATTTCAGAAGATGAATCTATGGCTGATGCAAATATTGA GCACTCTATGGTCATGGTTGATGAAACTGTGGAGGCAAAAGTAGTACCACTCGAGGAGAG TACAGAGAATAATGCTGCTACCATAGGAGTAGTTGAGGAGACAGCTGAAGGTGAAACTAA GGAGGAAGCACCAGACGAGAAGGGGAAAATAGAAAATAATGAAGATGCTGACAAATTAGC TGGAGAGACCAGGGCAGGTGAAATTACAGTTGAGGCACCAGATGAGAAAACAGAAATTAA AGCAGATGCTGACACACCAGCTGGTGAGACCAAAGAATGTGAAATTACAGTAGAGGCACC AGATGAGAAAATAGCAAACAAAGGTATTGTTGAACCAATAATCAGGGAGATAACTGAAGA TCAAACTGCAGCTGGAGAACCAGATGAAGAAGCTACAACAACTGAGGAAACGGTAGAGGA TGTTAAGGTGCTAGATGATAAGTCTACAGCAGATGGGAAACCTGTAGAGAATGCCACAGT CGCGACAAATGAGGATTCAACAACAGTTGAGAATACTCTGAAGGATGCAATGGTTGCGCC ACCAGGTACAAATACCACCAACGCCGAAGAAACTGCTCTGGGTGCCACAGTTAAAGCACT AGATGAGGATGCTCTAGCAGTGGAGAAGACTATAGAGGATACCTCGGTTGAGGCATCAGA TGTACAAGCAGGCAGGTGCAAGTGAGTAAACCAGCTTATCGAACCTTGCGTTCCTGTCAG TTTCTGTTGATATCGACGTAGTTTGCTCAACTGATTCTCTCATCTAGAACTTTAGATGAT GTGTTCTGTATAGAAAACCTGAAACTACTTTAGCATCATAAGGCCATTAGGTATTGACAA CTAGGGCATCTATATCCTTCTCCCCCTTTTTTGCTCTATAAACTTCACCTAGTTGTATTG GGCGCGTACGTGTTGGTGTTGTCATAAACACAATTTCCTCCTATATGTCAGTTCAATGCT CAGGTGATCAGTGACTGAGTGAAAGCCTTGAATCAATAGGGGGAAGGCATGTTCATTACT ACATTTAACGGTTAGGCTTGCGAGTCTTTAGATTATCTACTTGGATCAAATGATTCTTGT ATCATTTGCCATTTGTAACCAACTGTGTTCTGGAATCCTTTTATCATATTACGTAGAATA TTTAG