Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d038389_T009
CDS Infomation	cds chromosome:B73_RefGen_v4:6:156203829:156209580:-1 gene:Zm00001d038389 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphatidate phosphatase PAH1
Sequence	ATGAACGTGGTGGGAAGGGTTGGGTCGGTGATCTCGCAGGGGGTGTACTCCGTTGCAACA CCCTTCCACCCATTTGGCGGTGCGGTTGACATTATCGCGGTTGAGCAGCCTGATGGTTCG TACCGCACCACACCATGGTACGTCCGTTTTGGGAAGTTCCAGGGCGTGCTCAAGGGTGCT GAGAAGGTCGTCACCATCAGAGTCAATGGCGTCGAAGCCAACTTCCACATGCAGCTTGAC AATTCCGGCCAAGCCTATTTCATGCGTGAGCTTGTGCCCGGCGGTGAAGATTCTGGAACA GGTTCAGACGACGAAACTGTCAATGAGCCTGAACCTCCAGCGCGTAGTAAGAGTGATGGG GAACTTTACATTGGTCCTAGCGACAGACTGGGTAGCCAAGAGCTCAATGTGGAGCATCAA GAGAAGCAAACTAGGGATGAGTTTGAGTCATATGATGGTTATGGTAGGTTAGAGGAATCA GAAGATTTGTCAACCCAAGCGGATGGGGGAAATTCGGAGGTGGTTCTAGTTAGTGTGGAC GGACATGTGCTCACTGCACCTATTTCTTCAACAGAGGAGGGTATGGAGGATGTGCAGTTA TGCGACCCTCAGTTTCATTTGGGACCTGGGCAGAGCTCTAGTGGGGAGTTCACCCGAAGT GGCGAGGTCTGGGATGCTGACATTTTAGATGGTTTATACATATCACAGGAAAAGGTAAAG ATTAATTCTGGACATCAGTCAGAGGTTTTAACAGAGAATGGAGAGGTACCGGTTGAAAAG GATGGGTCACATCACATCTCAGTGGACAAAGATGAAGTACATGTGTCAATCAATGATGAT GAAGCTCATGCTGTTTCTACAAATGAAGTTGAGGTTCAGGATGTGTCAAGGTCAGGGAAT GGTGATGTGGTTTATCAAACCATGACCAGTGAAGGTGAGTCCCATAGTATTTTAGGGGAC ATAGATGTTGGCCATCAAACATTGACCAGGGAGGATGACTCTCCTGGTGTTTCAGGGGAG AATGTTGTGGGTTATCAACCCTTGACCAATGAACATAAAGCTCATGATATATTAGAGAAC AATGATGAGGATCAACCACCCCTGAACAATGAAGATGAATCTTGTGATGTGCCAGTGCTT GAAAAAGACAAGGATTGCAACTCCCCAGCTAATAAGGATGAGGTTTGTGATCTCAACAAT GAGGATACTGAGGATACCAGTGCTAGTTTTGGTAAAAACGACGCTTTCCAGAGCTGTTTG GATCTGACGTCACAAATAGATGACGGGGATTCAGGAAACGAACTATTTTCACCTGGATCT GATTCTCAGAGGGATGCTGAGCATAATTTGGGTAACTGTTCTGTTGCTGAAACAGATTTG GAGGAAGGTGAAAGTAAAACTGCTTACTGTGGTCAGTATGGTCCTTTACAGGAGGGAGTG AATGTTTCATTATTTACCTTAGAAGTTGATAAGACTCAAAACAAAGAGAGTTCTCCTGCT GGAGGTTCTCATGATAGGGACAAGGAAATTGCCTCTGAAATTGAGGCTGCCGCATCTGAT GGTTTACAGTCATCCATGGCGACCAGTGGTAAAGACAAACTGGGGAGCATTCCAGAGCAC TCAGAAGTTGAAGATGAACAGAATAAAGAAGAACATTCTCAGTCACAGAATGGCTTGGGT GTTGAGATTTCTCTTTGTGGGAACATGTTACGACCAGGAATGGGCCGAGAATCTGCTGAG GAAGTGTTTCAACAGAATCTTGTCCATGAGGAGGATTTCAAATCATCTGGATCAACAATG ATAAAAAATGCAAACCTTATTGTCAAAGTTGACAATAATTATTTCCCCTGGAATAAAGTT TCTCATGTTATTCTTGGGAAGGCTGTATATGGCTCAAAGTTTCCCTTAGAACCCACTGAT GCTGTTCCGGTTGAACAACAGGAAACACCCAAATCAAGAGAGGACTCTCTTAGAATGTCT CCCTCAAGCCGGAGATGGAGGCTTTGGCTCAATCCCTTTCGGATAACAAGATCCCTTCAA CGTAGTAACAGTGATTCTTCCGAAGACATTTTCCTTGACTCAGAGTCTGTTTTGAGTCCA ATGGATGATCAAACTCTGGAGAACAACAAAAACCAGTCACCTAGAAAGCAATTCGTACGG ACTTTGATTCCCACAAGTGAACAGGTAGCATCTTTAAATCTGAAGGAGGGCCAAAACTTG GTGACCTTTAGCTTCTCCACCAGAGTTCTTGGGAAGCAACAGGTTGATGCACATATTTAC TTGTGGAAATGGAATGCTAAAATTGTGATATCTGATGTGGATGGCACCATAACAAGGTCT GACGTGCTGGGTCAGGTCATGCCTTTGGTTGGACGTGATTGGAGTCACTCAGGTGTTGCT CGCCTTTTTTCTGCAATTAAGGAAAACGGTTATCAACTACTATTCCTTAGTGCTAGAGCA ATTGTCCAGGCATATCTCACGAAGAACTTCCTCTTTAATCTCAAACAGGATGGGAAAGCA CTACCCAATGGGCCTGTTGTAATTTCACCTGATGGCTTGTTTCCTTCACTCTACCGAGAA GTTCTTAGTTATACGGAGAGCCCCACATGA

Peptide Sequence

PEP ID	Zm00001d038389_P009
PEP Infomation	pep chromosome:B73_RefGen_v4:6:156203829:156209580:-1 gene:Zm00001d038389 transcript:Zm00001d038389_T009 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphatidate phosphatase PAH1
Sequence	MNVVGRVGSVISQGVYSVATPFHPFGGAVDIIAVEQPDGSYRTTPWYVRFGKFQGVLKGA EKVVTIRVNGVEANFHMQLDNSGQAYFMRELVPGGEDSGTGSDDETVNEPEPPARSKSDG ELYIGPSDRLGSQELNVEHQEKQTRDEFESYDGYGRLEESEDLSTQADGGNSEVVLVSVD GHVLTAPISSTEEGMEDVQLCDPQFHLGPGQSSSGEFTRSGEVWDADILDGLYISQEKVK INSGHQSEVLTENGEVPVEKDGSHHISVDKDEVHVSINDDEAHAVSTNEVEVQDVSRSGN GDVVYQTMTSEGESHSILGDIDVGHQTLTREDDSPGVSGENVVGYQPLTNEHKAHDILEN NDEDQPPLNNEDESCDVPVLEKDKDCNSPANKDEVCDLNNEDTEDTSASFGKNDAFQSCL DLTSQIDDGDSGNELFSPGSDSQRDAEHNLGNCSVAETDLEEGESKTAYCGQYGPLQEGV NVSLFTLEVDKTQNKESSPAGGSHDRDKEIASEIEAAASDGLQSSMATSGKDKLGSIPEH SEVEDEQNKEEHSQSQNGLGVEISLCGNMLRPGMGRESAEEVFQQNLVHEEDFKSSGSTM IKNANLIVKVDNNYFPWNKVSHVILGKAVYGSKFPLEPTDAVPVEQQETPKSREDSLRMS PSSRRWRLWLNPFRITRSLQRSNSDSSEDIFLDSESVLSPMDDQTLENNKNQSPRKQFVR TLIPTSEQVASLNLKEGQNLVTFSFSTRVLGKQQVDAHIYLWKWNAKIVISDVDGTITRS DVLGQVMPLVGRDWSHSGVARLFSAIKENGYQLLFLSARAIVQAYLTKNFLFNLKQDGKA LPNGPVVISPDGLFPSLYREVLSYTESPT

Transcript Sequence

Transcript ID	Zm00001d038389_T009
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:156203829:156209580:-1 gene:Zm00001d038389 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphatidate phosphatase PAH1
Sequence	GTCGTCCCAAAATCCAATTCCGACCTCGCCATCGACGGAGGCGGCGTCGCGGCGCGGCGC GGGATCGGGCGGCGCCTCCAGAAGCCTCTCGGACGGCCGAGACCAACAGGCCGGAGGAGG AGGCGATCAGGACGAGCCCAATCGCTCTCAGTCCCAGCTACCTCCCCGTTTCTTTGGGAC CGAATTCGGTTCGTCGTCAACCCCCATTTTCCTCGAGTCGATGAAGGAATTGCTCGAATC GAGGCCTGGATTGACGGGTGTTTGAGGCTCGGTGACCGAGGAGCGCCGCTTCAGATATGA ACGTGGTGGGAAGGGTTGGGTCGGTGATCTCGCAGGGGGTGTACTCCGTTGCAACACCCT TCCACCCATTTGGCGGTGCGGTTGACATTATCGCGGTTGAGCAGCCTGATGGTTCGTACC GCACCACACCATGGTACGTCCGTTTTGGGAAGTTCCAGGGCGTGCTCAAGGGTGCTGAGA AGGTCGTCACCATCAGAGTCAATGGCGTCGAAGCCAACTTCCACATGCAGCTTGACAATT CCGGCCAAGCCTATTTCATGCGTGAGCTTGTGCCCGGCGGTGAAGATTCTGGAACAGGTT CAGACGACGAAACTGTCAATGAGCCTGAACCTCCAGCGCGTAGTAAGAGTGATGGGGAAC TTTACATTGGTCCTAGCGACAGACTGGGTAGCCAAGAGCTCAATGTGGAGCATCAAGAGA AGCAAACTAGGGATGAGTTTGAGTCATATGATGGTTATGGTAGGTTAGAGGAATCAGAAG ATTTGTCAACCCAAGCGGATGGGGGAAATTCGGAGGTGGTTCTAGTTAGTGTGGACGGAC ATGTGCTCACTGCACCTATTTCTTCAACAGAGGAGGGTATGGAGGATGTGCAGTTATGCG ACCCTCAGTTTCATTTGGGACCTGGGCAGAGCTCTAGTGGGGAGTTCACCCGAAGTGGCG AGGTCTGGGATGCTGACATTTTAGATGGTTTATACATATCACAGGAAAAGGTAAAGATTA ATTCTGGACATCAGTCAGAGGTTTTAACAGAGAATGGAGAGGTACCGGTTGAAAAGGATG GGTCACATCACATCTCAGTGGACAAAGATGAAGTACATGTGTCAATCAATGATGATGAAG CTCATGCTGTTTCTACAAATGAAGTTGAGGTTCAGGATGTGTCAAGGTCAGGGAATGGTG ATGTGGTTTATCAAACCATGACCAGTGAAGGTGAGTCCCATAGTATTTTAGGGGACATAG ATGTTGGCCATCAAACATTGACCAGGGAGGATGACTCTCCTGGTGTTTCAGGGGAGAATG TTGTGGGTTATCAACCCTTGACCAATGAACATAAAGCTCATGATATATTAGAGAACAATG ATGAGGATCAACCACCCCTGAACAATGAAGATGAATCTTGTGATGTGCCAGTGCTTGAAA AAGACAAGGATTGCAACTCCCCAGCTAATAAGGATGAGGTTTGTGATCTCAACAATGAGG ATACTGAGGATACCAGTGCTAGTTTTGGTAAAAACGACGCTTTCCAGAGCTGTTTGGATC TGACGTCACAAATAGATGACGGGGATTCAGGAAACGAACTATTTTCACCTGGATCTGATT CTCAGAGGGATGCTGAGCATAATTTGGGTAACTGTTCTGTTGCTGAAACAGATTTGGAGG AAGGTGAAAGTAAAACTGCTTACTGTGGTCAGTATGGTCCTTTACAGGAGGGAGTGAATG TTTCATTATTTACCTTAGAAGTTGATAAGACTCAAAACAAAGAGAGTTCTCCTGCTGGAG GTTCTCATGATAGGGACAAGGAAATTGCCTCTGAAATTGAGGCTGCCGCATCTGATGGTT TACAGTCATCCATGGCGACCAGTGGTAAAGACAAACTGGGGAGCATTCCAGAGCACTCAG AAGTTGAAGATGAACAGAATAAAGAAGAACATTCTCAGTCACAGAATGGCTTGGGTGTTG AGATTTCTCTTTGTGGGAACATGTTACGACCAGGAATGGGCCGAGAATCTGCTGAGGAAG TGTTTCAACAGAATCTTGTCCATGAGGAGGATTTCAAATCATCTGGATCAACAATGATAA AAAATGCAAACCTTATTGTCAAAGTTGACAATAATTATTTCCCCTGGAATAAAGTTTCTC ATGTTATTCTTGGGAAGGCTGTATATGGCTCAAAGTTTCCCTTAGAACCCACTGATGCTG TTCCGGTTGAACAACAGGAAACACCCAAATCAAGAGAGGACTCTCTTAGAATGTCTCCCT CAAGCCGGAGATGGAGGCTTTGGCTCAATCCCTTTCGGATAACAAGATCCCTTCAACGTA GTAACAGTGATTCTTCCGAAGACATTTTCCTTGACTCAGAGTCTGTTTTGAGTCCAATGG ATGATCAAACTCTGGAGAACAACAAAAACCAGTCACCTAGAAAGCAATTCGTACGGACTT TGATTCCCACAAGTGAACAGGTAGCATCTTTAAATCTGAAGGAGGGCCAAAACTTGGTGA CCTTTAGCTTCTCCACCAGAGTTCTTGGGAAGCAACAGGTTGATGCACATATTTACTTGT GGAAATGGAATGCTAAAATTGTGATATCTGATGTGGATGGCACCATAACAAGGTCTGACG TGCTGGGTCAGGTCATGCCTTTGGTTGGACGTGATTGGAGTCACTCAGGTGTTGCTCGCC TTTTTTCTGCAATTAAGGAAAACGGTTATCAACTACTATTCCTTAGTGCTAGAGCAATTG TCCAGGCATATCTCACGAAGAACTTCCTCTTTAATCTCAAACAGGATGGGAAAGCACTAC CCAATGGGCCTGTTGTAATTTCACCTGATGGCTTGTTTCCTTCACTCTACCGAGAAGTTC TTAGTTATACGGAGAGCCCCACATGAATTCAAGATTGCTTGCCTGGAGGACATTAAGGCG CTCTTTCCTTCTGATTACAATCCATTTTATGCTGGGTTTGGTAACAGAGATACTGATGAG CTCAGTTACAAGAAGATGGGAATACCTAAAGGCAAGATTTTTATCATCAACCCAAAGGGT GAAGTGGCTGTCAACAGTTCTGTTGATGTGAAGTCTTATACGTCCCTACATACCCTTGTC AATGACATGTTTCCACCAACAACTCTGGTTGAGCAGGAAGACTACAACAACTGGAATTAC TGGAAGGTGCCATTACCAGATGTTGATTTGTAGTGTAGTTTTGACAGAAACAGCCGTAGA TACCAGTAGATCCTGCAAAAGCCTAGCAGTAGAGCTTCCTGTACCCTAATATTCAGCCAC CACGACGGTTTTAGGTCCAATTTGTGAAGGTCTCAAGAATTCCGGGATGTATGGTTTTCT GAAAGCCAATGGCCCAAGGAAACGTTGCCACTTTATTTCCTTCGACGGAGCTTTCACGTG ATCATACGGCTTTTGGGTAGTCATCTGATTGTCTTCGTCGAACTTGTTGTACCCAGAGGT CTGAGCCCTAGACCCTCGATTCATTAGAGAACTCGTGATCTGGTCATTGTCCAAGCTACT TTGTTCTGATTGCAGGAAATCTTTAGGTGCCAAAAGCAGCTGTACATTTTTTTTTTCGTG ATCCAAAAACAGCTGTACATCGTATATCAGCGCATAGAAGAGAATTGCTAAG