Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d038340_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:6:154857022:154859451:1 gene:Zm00001d038340 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphoribosylanthranilate transferase

Sequence

ATGAAGGGAGCAACGCCGCCGCGGCCGTTCATGGTGCCGGGCCCTGGGGGCCCGATGCCG
CCCCCGCAGCAGCAGTTCGGGCTGGTGGAGACTCGCCCCCCGCTGGCCGCCGTGCTGCGG
CCGCGCTTCAACATCCCGGGCCTCCACCCCTCGGCGGCCGCCGCCGCCGCGGCCTCGGGC
GCGGGCAAGATCGCCTCCACCTACGACCTCGTCGAGCCGATGCGGTTCCTCTACGTGCAC
GTCGTCAAGGCGCGCGACCTGCCCGCGGTGTCCGCCACGGGCTCCATCGACCCCTTCGTC
GAGGTCAAGCTCGGCAACTTCAAGGGCACCACGCCCGTCAGGGCGGCCAGCCACAGCCCG
TCCTGGCAGCAGGTCTTCGCCTTCTCCGCCGCGCACCTCCAGTCCCACCTGCTCGAGGTC
GCCCTCAAGGCCAAGGACCTCGCCGGCGACGACCTCGTCGGCCGCGTCGCGTTCGACCTC
TCGGAGGTGCCCGTCCGCGTGCCCCCGGACTCGCCGCTCGCGCCGCAGTGGTACCGCCTC
GAGACCAAGCGCGGGGAGAAGCTGCCCCACGGGGAGATCATGCTCTCCGTCTGGCTCGGC
ACCCAGGCCGACGAGGCGTTCCCGGACGCCTGGCACTCCGACGCGCACGCCGCCGCGGGC
CCCGCCGCCGTCGCGTCCACGCGCGCCAAGGTATACTTCTCGCCCAAGCTCGTGTACCTC
CGCGTCGCCGCCATCGCCGCGCAGGACCTCGTCCCACACGACGCCTCGCGCCCGATGACC
GCCTGCGTCAAGCTGCAGCTCGCCGGCCAGGTGCGCCGCACGCGCCCCGGCGCGCCGCCG
GGGACGCCCAACCCGATCTGGAACGAGGAGTTCATGTTCGTCGCGTCGGAGCCCTTCGAC
GAGCCGCTCCTTGTCACCGTCGAGGACCGCGTCGCGCCCGGCCGCGACGAGATCCTCGGC
CGCATTGTCCTGCCCCTCAAAGCGGCAATGCCGCGGCACGACCACTTCGGCAAGCCTGTG
GAGCCGCGGTGGTACAGCCTTATGCGCCACTCCGATGATCCTGACAAGAAGGAGGTTAAG
TTCGCAAGCAAGATACAGATTCGGATGTCGCTTGATTTTGGGTATCATGTTCTTGACGAG
TCCACCTACTACAGCAGTGATCTGCAGCCATCGTCAAAGCCTGCAAGGAAACCAAGCATT
GGGATGCTTGAGCTGGGAGTTCTGGGTGCCCGGAACTTGATACCGATGAAGCCCAAGGAT
GGACGCACCACAGACGCCTATTGTGTGGCAAAATATGGACCAAAGTGGGTGCGCACCAGG
ACTATTCTTGACACACTGAATCCACAATGGAATGAGCAGTACACTTGGGAGGTGTTTGAT
CCTTGCACCGTGATCACAGTGGTGGTGTTTGACAACGGGCAAATTGGGAGCAAGAATGGT
GGTGGCCCAGATCAGCGCATTGGGAAGGTCAGGATCCGGCTCTCTACACTGGAGACAGAC
AGAGTGTACACGCATTTCTACCCTTTGCTGGTTTTACATCCAAGTGGACTCAAGAAGACT
GGTGAGCTTCATTTGGCTGTGCGGTTTACCTGCACAGCTTGGGTGAACATGATGGCGCTG
TATGGTCGACCGCTTCTTCCAAAGATGCACTACACACATCCAATCGCAGTGATGCAATTG
GACTACCTGAGGCACCAGGCAATGCAGATTGTTGCCGCAAGACTCAGCCGTGCTGAGCCC
CCGCTGCGCAGGGAAGTTGTGGAATACATGCTCGATGTGGACTCACATATGTTTAGTCTC
CGGCGCAGCAAGGCTAATTTTCATCGCATTACCTCACTGTTCTTTGGTTTTGTGGCAATG
CTCAAGTGGTACCATAGCATCAGGAGCTGGTGTAATCCAATCACAACAATGCTAGTACAC
ATGCTGTTCTTGATACTGATCTGCTATCCGGAGCTCATCCTGCCTACCATCTTCCTCTAC
ATGTTCATGATCGGGCTGTGGAACTATCGGTACCGGCCAAGGCATCCGTCACACATGGAT
ACTAAGCTCTCCCATGCTGAGCTGACACACCCTGATGAGCTTGATGAGGAGTTTGACACG
TTCCCTTCCTCCAGACCAGCTGAAATTGTAAGAATGCGCTATGACAGGCTGAGGAGCGTT
GGAGGTCGTGTGCAGGCTGTGGTTGGGGACCTGGCGACACAAGGCGAGAGAGCCCATGCT
TTGCTGAGCTGGAGGGACCCTCGGGCCACCGCCATCTTCATTTTCTTATCCCTGGTGATC
GCCGTTGTGCTGTACGTGACGCCGTTCCAGGTTTTGATGGTCATAGCCATGCTTTACCTG
CTGCGACATCCCCGGTTCCGCAGCAGGATGCCCTCAGTGCCTTTCAACTTCTACAGGAGA
CTGCCTGCCAAGTCTGATATGCTCCTTTAA

Peptide Sequence

PEP ID

Zm00001d038340_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:6:154857022:154859451:1 gene:Zm00001d038340 transcript:Zm00001d038340_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphoribosylanthranilate transferase

Sequence

MKGATPPRPFMVPGPGGPMPPPQQQFGLVETRPPLAAVLRPRFNIPGLHPSAAAAAAASG
AGKIASTYDLVEPMRFLYVHVVKARDLPAVSATGSIDPFVEVKLGNFKGTTPVRAASHSP
SWQQVFAFSAAHLQSHLLEVALKAKDLAGDDLVGRVAFDLSEVPVRVPPDSPLAPQWYRL
ETKRGEKLPHGEIMLSVWLGTQADEAFPDAWHSDAHAAAGPAAVASTRAKVYFSPKLVYL
RVAAIAAQDLVPHDASRPMTACVKLQLAGQVRRTRPGAPPGTPNPIWNEEFMFVASEPFD
EPLLVTVEDRVAPGRDEILGRIVLPLKAAMPRHDHFGKPVEPRWYSLMRHSDDPDKKEVK
FASKIQIRMSLDFGYHVLDESTYYSSDLQPSSKPARKPSIGMLELGVLGARNLIPMKPKD
GRTTDAYCVAKYGPKWVRTRTILDTLNPQWNEQYTWEVFDPCTVITVVVFDNGQIGSKNG
GGPDQRIGKVRIRLSTLETDRVYTHFYPLLVLHPSGLKKTGELHLAVRFTCTAWVNMMAL
YGRPLLPKMHYTHPIAVMQLDYLRHQAMQIVAARLSRAEPPLRREVVEYMLDVDSHMFSL
RRSKANFHRITSLFFGFVAMLKWYHSIRSWCNPITTMLVHMLFLILICYPELILPTIFLY
MFMIGLWNYRYRPRHPSHMDTKLSHAELTHPDELDEEFDTFPSSRPAEIVRMRYDRLRSV
GGRVQAVVGDLATQGERAHALLSWRDPRATAIFIFLSLVIAVVLYVTPFQVLMVIAMLYL
LRHPRFRSRMPSVPFNFYRRLPAKSDMLL

Transcript Sequence

Transcript ID

Zm00001d038340_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:154857022:154859451:1 gene:Zm00001d038340 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphoribosylanthranilate transferase

Sequence

ATGAAGGGAGCAACGCCGCCGCGGCCGTTCATGGTGCCGGGCCCTGGGGGCCCGATGCCG
CCCCCGCAGCAGCAGTTCGGGCTGGTGGAGACTCGCCCCCCGCTGGCCGCCGTGCTGCGG
CCGCGCTTCAACATCCCGGGCCTCCACCCCTCGGCGGCCGCCGCCGCCGCGGCCTCGGGC
GCGGGCAAGATCGCCTCCACCTACGACCTCGTCGAGCCGATGCGGTTCCTCTACGTGCAC
GTCGTCAAGGCGCGCGACCTGCCCGCGGTGTCCGCCACGGGCTCCATCGACCCCTTCGTC
GAGGTCAAGCTCGGCAACTTCAAGGGCACCACGCCCGTCAGGGCGGCCAGCCACAGCCCG
TCCTGGCAGCAGGTCTTCGCCTTCTCCGCCGCGCACCTCCAGTCCCACCTGCTCGAGGTC
GCCCTCAAGGCCAAGGACCTCGCCGGCGACGACCTCGTCGGCCGCGTCGCGTTCGACCTC
TCGGAGGTGCCCGTCCGCGTGCCCCCGGACTCGCCGCTCGCGCCGCAGTGGTACCGCCTC
GAGACCAAGCGCGGGGAGAAGCTGCCCCACGGGGAGATCATGCTCTCCGTCTGGCTCGGC
ACCCAGGCCGACGAGGCGTTCCCGGACGCCTGGCACTCCGACGCGCACGCCGCCGCGGGC
CCCGCCGCCGTCGCGTCCACGCGCGCCAAGGTATACTTCTCGCCCAAGCTCGTGTACCTC
CGCGTCGCCGCCATCGCCGCGCAGGACCTCGTCCCACACGACGCCTCGCGCCCGATGACC
GCCTGCGTCAAGCTGCAGCTCGCCGGCCAGGTGCGCCGCACGCGCCCCGGCGCGCCGCCG
GGGACGCCCAACCCGATCTGGAACGAGGAGTTCATGTTCGTCGCGTCGGAGCCCTTCGAC
GAGCCGCTCCTTGTCACCGTCGAGGACCGCGTCGCGCCCGGCCGCGACGAGATCCTCGGC
CGCATTGTCCTGCCCCTCAAAGCGGCAATGCCGCGGCACGACCACTTCGGCAAGCCTGTG
GAGCCGCGGTGGTACAGCCTTATGCGCCACTCCGATGATCCTGACAAGAAGGAGGTTAAG
TTCGCAAGCAAGATACAGATTCGGATGTCGCTTGATTTTGGGTATCATGTTCTTGACGAG
TCCACCTACTACAGCAGTGATCTGCAGCCATCGTCAAAGCCTGCAAGGAAACCAAGCATT
GGGATGCTTGAGCTGGGAGTTCTGGGTGCCCGGAACTTGATACCGATGAAGCCCAAGGAT
GGACGCACCACAGACGCCTATTGTGTGGCAAAATATGGACCAAAGTGGGTGCGCACCAGG
ACTATTCTTGACACACTGAATCCACAATGGAATGAGCAGTACACTTGGGAGGTGTTTGAT
CCTTGCACCGTGATCACAGTGGTGGTGTTTGACAACGGGCAAATTGGGAGCAAGAATGGT
GGTGGCCCAGATCAGCGCATTGGGAAGGTCAGGATCCGGCTCTCTACACTGGAGACAGAC
AGAGTGTACACGCATTTCTACCCTTTGCTGGTTTTACATCCAAGTGGACTCAAGAAGACT
GGTGAGCTTCATTTGGCTGTGCGGTTTACCTGCACAGCTTGGGTGAACATGATGGCGCTG
TATGGTCGACCGCTTCTTCCAAAGATGCACTACACACATCCAATCGCAGTGATGCAATTG
GACTACCTGAGGCACCAGGCAATGCAGATTGTTGCCGCAAGACTCAGCCGTGCTGAGCCC
CCGCTGCGCAGGGAAGTTGTGGAATACATGCTCGATGTGGACTCACATATGTTTAGTCTC
CGGCGCAGCAAGGCTAATTTTCATCGCATTACCTCACTGTTCTTTGGTTTTGTGGCAATG
CTCAAGTGGTACCATAGCATCAGGAGCTGGTGTAATCCAATCACAACAATGCTAGTACAC
ATGCTGTTCTTGATACTGATCTGCTATCCGGAGCTCATCCTGCCTACCATCTTCCTCTAC
ATGTTCATGATCGGGCTGTGGAACTATCGGTACCGGCCAAGGCATCCGTCACACATGGAT
ACTAAGCTCTCCCATGCTGAGCTGACACACCCTGATGAGCTTGATGAGGAGTTTGACACG
TTCCCTTCCTCCAGACCAGCTGAAATTGTAAGAATGCGCTATGACAGGCTGAGGAGCGTT
GGAGGTCGTGTGCAGGCTGTGGTTGGGGACCTGGCGACACAAGGCGAGAGAGCCCATGCT
TTGCTGAGCTGGAGGGACCCTCGGGCCACCGCCATCTTCATTTTCTTATCCCTGGTGATC
GCCGTTGTGCTGTACGTGACGCCGTTCCAGGTTTTGATGGTCATAGCCATGCTTTACCTG
CTGCGACATCCCCGGTTCCGCAGCAGGATGCCCTCAGTGCCTTTCAACTTCTACAGGAGA
CTGCCTGCCAAGTCTGATATGCTCCTTTAA