Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d038328_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:6:154621325:154627300:1 gene:Zm00001d038328 gene_biotype:protein_coding transcript_biotype:protein_coding description:alpha/beta-Hydrolases superfamily protein
Sequence

ATGGCAATCAAAGGATGGAATGTTGTTGTAAGCAACCACAGGGGTCTTGGTGGCATCTCC
ATAACATCTGATTGCTTTTACAATGCCGGGTGGACGGCAGATATGCGTGAAGTTGTTAGT
TTCCTTCATCAAGAGTATCCTAAGGCTCCACTATTCACTGTTGGGACAAGCATAGGTGCC
AATATTGTGGTCAAGTATCTTGGAGAAGAAGGTGAAAACACACCTGTAGCTGGTGCTGCA
TCTATTTGTTCTCCCTGGGATCTGCTGGTGACCAGCAAATTTATTTCACGCAAGCTTGTG
CAGCGATGTTATGACAGAGCCCTTGCGATTGGTCTAAAAGGATATGCGAAACTACATCAA
TCAGTCTTGGCACGACTTGCAAACTGGGAAGCTATTACATCGTCACACTCTATCCGGGAA
TTCGACCGCCATGCCACTTGTGTTGTTGCAAAATACGAGACAGTGGACACATTCTACCGC
AAGTGCAGCAGTGCAAATTATATCGGTAATGTGTCAGTTCCACTGCTTTGTATCAGTGCC
TTAGATGACCCCCTCTGCACAAGGGAGGCCATTCCCTGGGATGAATGCAGGGCAAACAAA
AACATTGTATTGGCAACTACACCTAATGGCGGACATCTTGCTTTCTTTGAAGGCCTAACT
GCTGGAAAGCTTTGGTGGGTACGACCTGTTTCCGAGTTCCTCTGTGCTCTGCATGATGGC
CCCTACATGCATCGGCAGAAGGCACAAGGGCACGATTTGCACTCATCGTTGGAATCATCA
ATTGACAAGAGCCCATATGTGAATTTCATGGAAGATGGAATGGTAGCTGCATTAACAGAT
GATGGTCCTAACAACGGTGACTCCTTGCTTAACGAGGTTCTTGGTGAAATTGAACCTAAT
GATAGCGTGGTTGTCCAACACGTAAAACAGAACCAAAACACCAGAGCTATACAAAATGAG
AGTGACAGTTGGTTGGATGATAAAAACAGCTCCGAAGGGAATGTTCAAGCCCATGGAGGA
ACTCAAGAACAGAGAGAAGTGCCATATGCGAATAAAATCAGTGATGCCATTGGTCCTGTT
AAGAAATCAATAAACCAACTCAGTCGATCCCAGGGTAAGTCAATCTGGTTGCTTGCTTAC
ATTGCTCTTGTAACCTCTTGGCCGTTGCTTGGGGCCCTAGGTTTTTTCTTCAGGAAAAGG
TTGAGTAATTCTCTGTTATCTAGGAAGCTGAAGAAATCGTGA

Peptide Sequence

PEP ID

Zm00001d038328_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:6:154621325:154627300:1 gene:Zm00001d038328 transcript:Zm00001d038328_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:alpha/beta-Hydrolases superfamily protein
Sequence

MAIKGWNVVVSNHRGLGGISITSDCFYNAGWTADMREVVSFLHQEYPKAPLFTVGTSIGA
NIVVKYLGEEGENTPVAGAASICSPWDLLVTSKFISRKLVQRCYDRALAIGLKGYAKLHQ
SVLARLANWEAITSSHSIREFDRHATCVVAKYETVDTFYRKCSSANYIGNVSVPLLCISA
LDDPLCTREAIPWDECRANKNIVLATTPNGGHLAFFEGLTAGKLWWVRPVSEFLCALHDG
PYMHRQKAQGHDLHSSLESSIDKSPYVNFMEDGMVAALTDDGPNNGDSLLNEVLGEIEPN
DSVVVQHVKQNQNTRAIQNESDSWLDDKNSSEGNVQAHGGTQEQREVPYANKISDAIGPV
KKSINQLSRSQGKSIWLLAYIALVTSWPLLGALGFFFRKRLSNSLLSRKLKKS

Transcript Sequence

Transcript ID

Zm00001d038328_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:154621325:154627300:1 gene:Zm00001d038328 gene_biotype:protein_coding transcript_biotype:protein_coding description:alpha/beta-Hydrolases superfamily protein
Sequence

AACCGCCCGCAGCGCAGCGGCGAGATCGACATCGACCTCAATCGCTGACGAGTGACGACC
TTTCCGTGTCGATCGGTCTCCATTACTACTAGCTCGCGGGCGCGGCATCCCTCAACCGAA
ACTGATGAAGGCTGCGGTCTCCAGCGCCGGCGAGTCGGCGGGCGAGCTGCTTCTCCGCGC
GGCGGCGCTGGTGCCGTGGACGCGCTACTTCCTCGCGGCGCTAGCCCTGGCCGCCGTACT
CCTGTACAGGTTCCTGGAGCTCCACTTGCTCGGCGACCTCCTCCGCGGCCTCCGCGGCGG
CCGCGTCTCGCTTACCTTCCACCCCGAGTCTCAAGTGTACCACCGGGTCGCCTCCAAGTG
CCGCTCGCTGCACGGCAGGTACCTGACGACGCCGTGGTTAGCGAGTCCTCATTTGCAGAC
GCTGTTCCTGAGCATATCTGGCAGACCACCTTCATTCACCTATCGGAGGTTGGAGTGAAA
TAGTAAATCGTTGTCATCATTGATATTATTAAGCATTTGCGTGTTGCGTTCTTCATGGTG
TTGTTGCTCGCTTGCTTTTTAGTTCCTCTGTAGTAAAGTGATTAAGTGACTACATAGTGG
TTGTTACTTATACATTGTTATGTTTCTGTTGATGCTTTACTAAAACTTAGCTGATGCATT
CAATTTGGCTATGCAATTCTATGTGTTTATGGCTGGTGCACAAAGTCCAAAAGAAAATAG
TACTCCATCTGGTCCAAATTATAGTTCACATTAAGTTAAACTTCTTTAATCTCTACCGAT
TTTTTAGAAAAAATTATTAACGCTTCAAGTTCAAATAAATGTCATATCAAGACATATTAC
ATTATGAATTTAACGAAAGTAATTTCATGGTTTATGCTAAGTTAGTTTGACTTAAGATAA
AGTTAAAGGAGTACAATTTGGAATGGAAGGGGTATTTCATTATTGTGAACATATGATGTA
TATAGGGAGGCAAAAGTAGTTTTTCATATGTCCAGGAAATGTTTGGCTCCCATTGTTTCA
TTTCAGTATTCTGCAATTTGTGGCCACACATATCAGCTTGATATACCTTAGAGATCCTCA
TATTTTTAAATTAGGGCCTTGTAATACAAGATAAAAACTGCAATGTTATAGAGTTTTATG
ACTGTGGTTATCTTTCTCAGTGATTGGACTATTCATATTGCAGGCAGTTGTACACTGTTC
GTGATGGCGGTACCATTGCCTTAGATTGGTTACTAGCTTCTGATCTTGAAGATGGAGATA
TTGGCACTTCTGACGGAACCATTTCTAAGGATGATTCAACACCCCTTCTTGTTGTGATAC
CTGGATTAACTAGTGATTCTAGTGCTGCTTATGTGAAGCACTTGGTCTTTTCTATGGCAA
TCAAAGGATGGAATGTTGTTGTAAGCAACCACAGGGGTCTTGGTGGCATCTCCATAACAT
CTGATTGCTTTTACAATGCCGGGTGGACGGCAGATATGCGTGAAGTTGTTAGTTTCCTTC
ATCAAGAGTATCCTAAGGCTCCACTATTCACTGTTGGGACAAGCATAGGTGCCAATATTG
TGGTCAAGTATCTTGGAGAAGAAGGTGAAAACACACCTGTAGCTGGTGCTGCATCTATTT
GTTCTCCCTGGGATCTGCTGGTGACCAGCAAATTTATTTCACGCAAGCTTGTGCAGCGAT
GTTATGACAGAGCCCTTGCGATTGGTCTAAAAGGATATGCGAAACTACATCAATCAGTCT
TGGCACGACTTGCAAACTGGGAAGCTATTACATCGTCACACTCTATCCGGGAATTCGACC
GCCATGCCACTTGTGTTGTTGCAAAATACGAGACAGTGGACACATTCTACCGCAAGTGCA
GCAGTGCAAATTATATCGGTAATGTGTCAGTTCCACTGCTTTGTATCAGTGCCTTAGATG
ACCCCCTCTGCACAAGGGAGGCCATTCCCTGGGATGAATGCAGGGCAAACAAAAACATTG
TATTGGCAACTACACCTAATGGCGGACATCTTGCTTTCTTTGAAGGCCTAACTGCTGGAA
AGCTTTGGTGGGTACGACCTGTTTCCGAGTTCCTCTGTGCTCTGCATGATGGCCCCTACA
TGCATCGGCAGAAGGCACAAGGGCACGATTTGCACTCATCGTTGGAATCATCAATTGACA
AGAGCCCATATGTGAATTTCATGGAAGATGGAATGGTAGCTGCATTAACAGATGATGGTC
CTAACAACGGTGACTCCTTGCTTAACGAGGTTCTTGGTGAAATTGAACCTAATGATAGCG
TGGTTGTCCAACACGTAAAACAGAACCAAAACACCAGAGCTATACAAAATGAGAGTGACA
GTTGGTTGGATGATAAAAACAGCTCCGAAGGGAATGTTCAAGCCCATGGAGGAACTCAAG
AACAGAGAGAAGTGCCATATGCGAATAAAATCAGTGATGCCATTGGTCCTGTTAAGAAAT
CAATAAACCAACTCAGTCGATCCCAGGGTAAGTCAATCTGGTTGCTTGCTTACATTGCTC
TTGTAACCTCTTGGCCGTTGCTTGGGGCCCTAGGTTTTTTCTTCAGGAAAAGGTTGAGTA
ATTCTCTGTTATCTAGGAAGCTGAAGAAATCGTGAACACTGTGCTAACACAGATTTATTT
GGTATGTAAGAGCATGTACAGTGATGTTTAATATAGAGGCTCTTGAGATTATCTAAAGAG
AGCATTTGCAAAAAAAAAATTGTGGAGCTGTCTCTATGTGAAGAGACGCCTTTAGCTCG