Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d038325_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:6:154463287:154465019:-1 gene:Zm00001d038325 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGATCCAAATGGACAAGACGTCCATCATCGTTTGCTCGGTGATCGGGTCTCTAGGG
TTGCTGAGTGCCATCCTGGGGTTCTCGGCAGAGGGGACAAAGCTCACTCCATATACCATA
CTGGTGTACGGCGACGACTGCCTCTACCCGCAGAACCCGGCGATCGGGCTCGGGATCTGC
GCCGCCATCTTCCTGGTGGTGGCTCAGATCACCTTCTCGGCGGTGGGCGGCTGCTGCGGC
TGCTGCAGGTCCCGCGCCATCCCTTCGGAGACCAAAAGGATCGTCAGCATCGTCTGCGCC
GTTTTCTCATGGATAGCGGCGGTGATCGCGTTCGCGCTGTTCATACAAGGTGCGGCGTGG
AACGCCAACGTGGTGCGGGTGGAACAAGCGCCCTACTGCCCCTACCTCAAGGACGGCGTC
TTCGCCGGCGCGGCCGTGCTCGCCCTCGCCGCCACAGCGCTAAGCATCACCTCCTTCATC
ATGCAGCGGACCCAGCCAGCTGCGGCGGCGACGGCGACGGCGACGGCATCGGCTGTGGGC
ACACCGAACATGCCAGGAGGGCAGTCGCCGTCCCCCGAGGTAGTAATGGGCCAGCCGCTG
TTTCCGTCGGGCAAGGCGCATCAGAACGATTACCCCGTAAAACCCCAGGGATACGAGCAC
GAGCAGCAGCCTCATCAGGTGCAGCAGGTCCCTCCTCCTACCGACTCTCACCACCCACCA
CAAGGCTACGCACAGTCCGCTGCGCCAAACCACCAGCTCCCTCCGCGCCCAGCCCCAGCG
GCAGCAGCCGCAGCACCGGCGGCGGTCGCAGCGGCAGCCGCAGCCTCGGCACCGAGCGTG
CTGCAGCCGGCGCTCGGGACGGTCGCCATGGGCCAGCCGCTGCCGCTGCAGGTCCCGCCA
CAGTACTGCCTTCCTGTCCCGGCACCTCAGATCGGAGGCGTGGACATTCCTGCCGCTCTC
CCCTCTGCTGCTGCTCCGGCGGCAGGGAGCGGGTCCACGCTATCGACGGCTATCCGCAAC
GAAGTAGTGAGACAAGGGATTAGAATGGCTGCGGAGGTGGTGAAAGATTCCCTCTTTCCT
GAAAACGGGGGTAGCGTTCTTTCCATGATGACGGATTCCGCTGGAGGCGACGCTGTTCAG
GTTACAAACTAA

Peptide Sequence

PEP ID

Zm00001d038325_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:6:154463287:154465019:-1 gene:Zm00001d038325 transcript:Zm00001d038325_T001 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAIQMDKTSIIVCSVIGSLGLLSAILGFSAEGTKLTPYTILVYGDDCLYPQNPAIGLGIC
AAIFLVVAQITFSAVGGCCGCCRSRAIPSETKRIVSIVCAVFSWIAAVIAFALFIQGAAW
NANVVRVEQAPYCPYLKDGVFAGAAVLALAATALSITSFIMQRTQPAAAATATATASAVG
TPNMPGGQSPSPEVVMGQPLFPSGKAHQNDYPVKPQGYEHEQQPHQVQQVPPPTDSHHPP
QGYAQSAAPNHQLPPRPAPAAAAAAPAAVAAAAAASAPSVLQPALGTVAMGQPLPLQVPP
QYCLPVPAPQIGGVDIPAALPSAAAPAAGSGSTLSTAIRNEVVRQGIRMAAEVVKDSLFP
ENGGSVLSMMTDSAGGDAVQVTN

Transcript Sequence

Transcript ID

Zm00001d038325_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:154463287:154465019:-1 gene:Zm00001d038325 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTCCAGCAGATAGAGAAGCTTGGAATGGCGATCCAAATGGACAAGACGTCCATCATCGTT
TGCTCGGTGATCGGGTCTCTAGGGTTGCTGAGTGCCATCCTGGGGTTCTCGGCAGAGGGG
ACAAAGCTCACTCCATATACCATACTGGTGTACGGCGACGACTGCCTCTACCCGCAGAAC
CCGGCGATCGGGCTCGGGATCTGCGCCGCCATCTTCCTGGTGGTGGCTCAGATCACCTTC
TCGGCGGTGGGCGGCTGCTGCGGCTGCTGCAGGTCCCGCGCCATCCCTTCGGAGACCAAA
AGGATCGTCAGCATCGTCTGCGCCGTTTTCTCATGGATAGCGGCGGTGATCGCGTTCGCG
CTGTTCATACAAGGTGCGGCGTGGAACGCCAACGTGGTGCGGGTGGAACAAGCGCCCTAC
TGCCCCTACCTCAAGGACGGCGTCTTCGCCGGCGCGGCCGTGCTCGCCCTCGCCGCCACA
GCGCTAAGCATCACCTCCTTCATCATGCAGCGGACCCAGCCAGCTGCGGCGGCGACGGCG
ACGGCGACGGCATCGGCTGTGGGCACACCGAACATGCCAGGAGGGCAGTCGCCGTCCCCC
GAGGTAGTAATGGGCCAGCCGCTGTTTCCGTCGGGCAAGGCGCATCAGAACGATTACCCC
GTAAAACCCCAGGGATACGAGCACGAGCAGCAGCCTCATCAGGTGCAGCAGGTCCCTCCT
CCTACCGACTCTCACCACCCACCACAAGGCTACGCACAGTCCGCTGCGCCAAACCACCAG
CTCCCTCCGCGCCCAGCCCCAGCGGCAGCAGCCGCAGCACCGGCGGCGGTCGCAGCGGCA
GCCGCAGCCTCGGCACCGAGCGTGCTGCAGCCGGCGCTCGGGACGGTCGCCATGGGCCAG
CCGCTGCCGCTGCAGGTCCCGCCACAGTACTGCCTTCCTGTCCCGGCACCTCAGATCGGA
GGCGTGGACATTCCTGCCGCTCTCCCCTCTGCTGCTGCTCCGGCGGCAGGGAGCGGGTCC
ACGCTATCGACGGCTATCCGCAACGAAGTAGTGAGACAAGGGATTAGAATGGCTGCGGAG
GTGGTGAAAGATTCCCTCTTTCCTGAAAACGGGGGTAGCGTTCTTTCCATGATGACGGAT
TCCGCTGGAGGCGACGCTGTTCAGGTTACAAACTAATTAAGTAAGGATATGACGATGCGC
TTATTGCTTAATGCTCTGTGCGTTATACCTTGCCTTTAGTTTGCTGTCTGTTCTTCCTCC
TGTGTATCTGTCAGTAGCTTCGGCACTGTGAAGCATGTCCTGTGTCTGTATACCTACTTG
CTGTCGTTTGAATCGTCCTAAACTCGAACTTCAAGTCACTTTTTTCATTGTACCTGTGTA
ATATGTAGCTTTTGCCTAGTATCCATCAGAATTGTGCAGCTACACTGTTTATATGATGAT
TATGCTTGTATTTATTTGGAGGCGACT