Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d038312_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:6:154178760:154181261:1 gene:Zm00001d038312 gene_biotype:protein_coding transcript_biotype:protein_coding description:Integral membrane Yip1 family protein
Sequence

ATGTCGCCGCACCCTCTCCACTCCTCGTCGGGCGTGTCCGACATGGACGAGATGGCGGCG
ACTCACGCCCACGCCCACGCCCACGCCCACGCCGCGCGCGCCCAGGTCGTCGTCCTCCCC
TCCGCGCGGCCCTCCTCCCCTCCGCGCGCCTCCATCCCCGTCTCCTCCTCTGCCTACGCG
CCTCCACAGACTGCTGCCGCCAAGCTCCCATTCTCCGCAGCGGTGTCCGCACCCACCTCC
GCCTCGGGCTCCATCACTGTCGCTATCGCCTCCAGCGGGTTGGGCCCCGAGCCCAGCACG
CTCACCGAGCCCGTCTGGGACACCGTCAAGCGCGACCTCGCCCGTATCGTGAGCAACCTC
AAGCTCGTTGTCTTCCCCAACCCCTTCCGCGAGGACCCTGGCAAGGCTCTGCGCGACTGG
GACCTCTGGGGCCCCTTCTTCTTCATCGTCTTACTCGGACTCATCCTCTCCTGGTCGGCC
ACCGCCAAGAAGTCTCAAGTGTTCGCTGTTGCCTTCGCTGTATTAGCTGCTGGTGCTATA
GTTCTGACACTCAATGTTCTACTGCTGGGTGGGAACATAATCTTCTTCCAAAGCCTCAGT
CTTCTCGGATACTGTCTGTTCCCGCTGGACGTGGGGGCTCTGATTTGCATGCTTAAGGAC
AGTGTCATACTAAAGATGGTTGTGGTGACGGTAACATTGGCATGGAGCTCTTGGGCAGCA
TACCCCCTCATGAGTGCTGCTGTTAACCCAAAGAGAAAGGCCCTGGCGCTGTATCCCGTG
TTCCTCATGTATATCTCAGTTGCCTGTCTCATAATTGCTATAGATTAA

Peptide Sequence

PEP ID

Zm00001d038312_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:6:154178760:154181261:1 gene:Zm00001d038312 transcript:Zm00001d038312_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Integral membrane Yip1 family protein
Sequence

MSPHPLHSSSGVSDMDEMAATHAHAHAHAHAARAQVVVLPSARPSSPPRASIPVSSSAYA
PPQTAAAKLPFSAAVSAPTSASGSITVAIASSGLGPEPSTLTEPVWDTVKRDLARIVSNL
KLVVFPNPFREDPGKALRDWDLWGPFFFIVLLGLILSWSATAKKSQVFAVAFAVLAAGAI
VLTLNVLLLGGNIIFFQSLSLLGYCLFPLDVGALICMLKDSVILKMVVVTVTLAWSSWAA
YPLMSAAVNPKRKALALYPVFLMYISVACLIIAID

Transcript Sequence

Transcript ID

Zm00001d038312_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:154178760:154181261:1 gene:Zm00001d038312 gene_biotype:protein_coding transcript_biotype:protein_coding description:Integral membrane Yip1 family protein
Sequence

AGGATGGATCGCCTCCACTGATCCACCCGCCCGCCATGTCGCCGCACCCTCTCCACTCCT
CGTCGGGCGTGTCCGACATGGACGAGATGGCGGCGACTCACGCCCACGCCCACGCCCACG
CCCACGCCGCGCGCGCCCAGGTCGTCGTCCTCCCCTCCGCGCGGCCCTCCTCCCCTCCGC
GCGCCTCCATCCCCGTCTCCTCCTCTGCCTACGCGCCTCCACAGACTGCTGCCGCCAAGC
TCCCATTCTCCGCAGCGGTGTCCGCACCCACCTCCGCCTCGGGCTCCATCACTGTCGCTA
TCGCCTCCAGCGGGTTGGGCCCCGAGCCCAGCACGCTCACCGAGCCCGTCTGGGACACCG
TCAAGCGCGACCTCGCCCGTATCGTGAGCAACCTCAAGCTCGTTGTCTTCCCCAACCCCT
TCCGCGAGGACCCTGGCAAGGCTCTGCGCGACTGGGACCTCTGGGGCCCCTTCTTCTTCA
TCGTCTTACTCGGACTCATCCTCTCCTGGTCGGCCACCGCCAAGAAGTCTCAAGTGTTCG
CTGTTGCCTTCGCTGTATTAGCTGCTGGTGCTATAGTTCTGACACTCAATGTTCTACTGC
TGGGTGGGAACATAATCTTCTTCCAAAGCCTCAGTCTTCTCGGATACTGTCTGTTCCCGC
TGGACGTGGGGGCTCTGATTTGCATGCTTAAGGACAGTGTCATACTAAAGATGGTTGTGG
TGACGGTAACATTGGCATGGAGCTCTTGGGCAGCATACCCCCTCATGAGTGCTGCTGTTA
ACCCAAAGAGAAAGGCCCTGGCGCTGTATCCCGTGTTCCTCATGTATATCTCAGTTGCCT
GTCTCATAATTGCTATAGATTAAGGCGGGCATGGTTTCTACAGAACTATCAGAAGAATTA
CAGGATTTTGTTTTCTAGGTGGATCATCAAAATGCATATCCTTTTTTTTTGGCTGCGTAT
AGATCTGGGTTCACATTGTTATTGTAGTTTTTGCTGGCTGCTTCAATACCTTATTTCATT
TTGTTTAAGAAAAAAAAAATCGCAGGGATTTAGAATGTAGTCAATCAAATGTATGAATGT
TGTATAGCCATACAGATATCTTGCTGTTTCGCATCTATGTGGATAATCTGGAATGGACTG
CTGAAGCCTGAATAAGTGAATTACTCTGTTTT