Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d038302_T080
CDS Infomation	cds chromosome:B73_RefGen_v4:6:153946212:153956350:-1 gene:Zm00001d038302 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein ROS1
Sequence	ATGTCTGCGGGGAGAGGCGATCCAAACACCCCTGCCAACAGGCCTCTGTTCCTGAGTGCT GGGGTGCCCAACTTAGGCTGTCACAATGTTGCAGCTCCAGCTGCAGCAGGCAACAGCGGC TCGATCGCCTCGCAAGTCTTATTCTCCCCATGCTCCACGTCTGTCCTGAATACTATTCAG GAGGTTCCTGCTCCACAATCTGCTCTGTTGAGTCCGATAAACCGTGCAACTGAACAAGGT GATGTGCCCTGCATCCAGCCATCCTGGAATATGCCTGGGGGTTGCACGCAGGTGCCTATT AATATCATAGTGTTCCATAGGGAACTCACTAGAAGGGGTTCGAGGCCGCAGTTGTCGCCG TCGGCCACTGCCTTACCTGATGTTTCAGAGGGAGCTTCCATTCGGCTTGCTGGGAGTAAT TTCTTGTCACATGGAAGAACACCTAGCATCGTTGCAGGTGATATGACAACGAATTCTTCA CAGCTAGCCACTGCAGATAAATACAATTCAGAGCATCGGATGAATTGTTTACATGATGAA GCATCCAAGACTGAAAATGGAAAAGGAAGTACCCAACTTCCACAATTAGCAACAGCAATT TTCCGTGACAGCTACAATGATTTGGAATCAGTGGTTCCTGCAGCTACCTGGGAAACACGA GTGCAACATTCTCAAGAATCAACCACCTGTCTTGCAGAAAGTACCACTGATGACAACATT CATATGTACCAATCTATGCAAAAAAGGCTCAAGACACAAATCAACAAGAGTGAACACACA CCATTGTCAGCACCAACTGTACCCAAGGAGAAAACACTGACTCAAATTGAGACGCAGCTA GCAAGTGCCGAGAAAACCGAAATGTTCAGGAATGAGGAAACCCCAGCGCTGAAAATGAAG GCTCGGAAGAAAAAACACAGACCAAAGGTAATCAGAGAGAATAAGCCAGCCAAAGTGCAG AAACCTGATTCAACACCAGATGGAAAATCTCCGAACCAAAAGGTCAAGAGAAGTTATGTC CGGAAGAAAAGAAACCTCAGCTCTCTGGAGAATTGCTCTGGTCCTGTTAGCGATCAATCA ATCTCTGGAGCAACAGGAGTTGCAGCTAGAAGCAGAACATCATCAGTTCGACGAAGTCTG CAATTTGAATCCAAAGAACAAGGATTGCAGGGCGGCCATTCGTCAATGGCCAACATACAC CATCACAACTATGAGAAACCTGGCCATGCTCAAAGTTCTTTCTACTCAGAGTCAGAAGTG CAGACTGGGCGTGTGATGCAAGAAGGTATGGAGAATTCACCAGGAGAATTAGCTTTCGAC ATGAGTCGCAGACTGAACAAATTTTTAGATGAGTACATACATTTGCCAGATATGCTAAAA CCTACACAAGAAGTTTCGGCTGCAACTTCTGCATCATTTAGTACGGAACTGGCAAGGGAA GAAGATAATGTGGGAAGAACTTGCAAACCTGATGGCAAAAGTAAGTGCAGTTTGTTTGCT GATGAAAGGGTGGTAAACCCCACAATAGAAGGGAACAAAAAGGACTTGGAATTAAACTAT TCTGATGCTGATGGTCTTGTTTCCTCAGCTAGGTCTTTACCTCAAATGGATCCCACAAGA AGTCAGATGGGTAAGGTGTCGGAAGTGGAAAACCCCACACACCATAGCAATGGTTCGCTA CCTGGCACACGGGACTCTGTTGTCTTGAGGGCTGCAGCTGAGATGTTCGCATTTTTCCAA GCGGGTGCAATAAAAAAGAAGCGATCTGCCCGACTCCGCAGAAATTCCCCCTTTTATACT ATGGATCTTAAGAATAATACTCTACAAGCATCAACAAGACTGCCACAGCCATGCATGGAT GCGCTGCATAGAAGTTCTTGCATTAAGTTTTTGACCAAAAAACGTTCAGAAAAGGCAAGA CCGCACTGTTCCAGTGTAATTCAACCAAATGATGAGCTGAAGGACAGGCTTTCAGCTGGA AGCACTTTTTATGGCGCAACTAATGGATGCAAAATATCAGAAGAGAGTTCTCCAAACTTT TCATCTCAGACCCTGGACAATAAAAGAATCAACGTTGATACTCATTGTGAAGTAGCAGAA GGGAGATCAACCAACACATCAACAGGACCCTATATGGATTACGTTCAAGGAGTTGCATCA AAGTTGAAGCATCTTGATTTGAATACTGAACAGGTGCAGAGAACTGAGATGCATTTATCT CTGACCACACCAGCTGTTATTTCTTTTGAGGGAACAAGTGGTCCTTCAAATGCTCTTGTC CCATATGGTGGTGTGGTGATGGTTCCCAATGAGAGGCCCTTGCAGTTAGTCAAAAAGCAG CGGCCTCGTGCTAAGGTTGACTTGGATTTTGAGACGACGAGGGTTTGGAACCTTTTGATG GGGAAATCAGCCGAGTCTTATGGGACTGATGTTGAAAAGGAGAGATGGTGGCAGCAAGAA AGAGAAGTGTTTCAAAGCCGTGCTAATTCGTTTATAGCACGCATGCGACTTGTTCAAGGG GACAGGCGCTTTTCTCCTTGGAAAGGATCTGTAGTCGATTCTGTAGTAGGAGTGTTCCTC ACTCAGAATGTAGCTGATCATCTTTCAAGCTCTGCCTATATGGCCCTTGCCGCAAGTTTT CCTTCACGGCCAGTCAACAATAATTGTAAGGATGATGGTACCACAGAAGACAATAAACAA ACCACCAGGATGAGTGAGCTAGTAGGAGAGAAAAGTGTGTTTGACCTTTTCTACAATGGT GTTAGACCTGATCTAGAAGTGGGATGTGAGGAGGTATCAATGACTTGCAAGAAGACACAC ATGGAACCAACAGACAATACTAGGGATAGTGAATTTATTGAAGGTGAAACCTATTCCTTT GATTACAAATCAACAGATGAAAGCGTTTGCAATCACAAAGGGATAGGTATAGAACATAAA GAACAACAATTACCAGATTTCTCCTCAGCAGAATTAACTGTGTCTACAGAACTCGTGCAG CAGATACAAATCCAGAAGATCTCATCCTCTCAAATTTTAACTTCAGAAACCATACAATCA AGATTATCTTTGAGTTCTGAGATACCTAGAAATTTTGTTTGTGGTGGTTCTGCTGCAGCT TATCAGCAGCTGGGAAGCAATTTCGACCAGGGAAGCTCATTAACAGAAAATGATGCCACA GCCAGTGAAATTGAATGTCACAGACTCCAAATGGCTGCAATAAATGATTATGGATTTGGT AAACCTGAGATTCCTTCTAGTTCCTCAATGCCATTTTTCTTGGCTGTTGATCCTCAACAA CTGAAATTGAGAAATGAGACAAATGTTTCTTCAACATCTTCCAACATTCCTTCAGATTCT GCATCACCAAACTTGAAAAATGGCACGGATCCTCTTTTGATGCCATTTAATTCCTACATG GCAGATTGGAGCAGCGATAAGATAACTTACACCACTCTGAACACT

Peptide Sequence

PEP ID	Zm00001d038302_P080
PEP Infomation	pep chromosome:B73_RefGen_v4:6:153946212:153956350:-1 gene:Zm00001d038302 transcript:Zm00001d038302_T080 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein ROS1
Sequence	MSAGRGDPNTPANRPLFLSAGVPNLGCHNVAAPAAAGNSGSIASQVLFSPCSTSVLNTIQ EVPAPQSALLSPINRATEQGDVPCIQPSWNMPGGCTQVPINIIVFHRELTRRGSRPQLSP SATALPDVSEGASIRLAGSNFLSHGRTPSIVAGDMTTNSSQLATADKYNSEHRMNCLHDE ASKTENGKGSTQLPQLATAIFRDSYNDLESVVPAATWETRVQHSQESTTCLAESTTDDNI HMYQSMQKRLKTQINKSEHTPLSAPTVPKEKTLTQIETQLASAEKTEMFRNEETPALKMK ARKKKHRPKVIRENKPAKVQKPDSTPDGKSPNQKVKRSYVRKKRNLSSLENCSGPVSDQS ISGATGVAARSRTSSVRRSLQFESKEQGLQGGHSSMANIHHHNYEKPGHAQSSFYSESEV QTGRVMQEGMENSPGELAFDMSRRLNKFLDEYIHLPDMLKPTQEVSAATSASFSTELARE EDNVGRTCKPDGKSKCSLFADERVVNPTIEGNKKDLELNYSDADGLVSSARSLPQMDPTR SQMGKVSEVENPTHHSNGSLPGTRDSVVLRAAAEMFAFFQAGAIKKKRSARLRRNSPFYT MDLKNNTLQASTRLPQPCMDALHRSSCIKFLTKKRSEKARPHCSSVIQPNDELKDRLSAG STFYGATNGCKISEESSPNFSSQTLDNKRINVDTHCEVAEGRSTNTSTGPYMDYVQGVAS KLKHLDLNTEQVQRTEMHLSLTTPAVISFEGTSGPSNALVPYGGVVMVPNERPLQLVKKQ RPRAKVDLDFETTRVWNLLMGKSAESYGTDVEKERWWQQEREVFQSRANSFIARMRLVQG DRRFSPWKGSVVDSVVGVFLTQNVADHLSSSAYMALAASFPSRPVNNNCKDDGTTEDNKQ TTRMSELVGEKSVFDLFYNGVRPDLEVGCEEVSMTCKKTHMEPTDNTRDSEFIEGETYSF DYKSTDESVCNHKGIGIEHKEQQLPDFSSAELTVSTELVQQIQIQKISSSQILTSETIQS RLSLSSEIPRNFVCGGSAAAYQQLGSNFDQGSSLTENDATASEIECHRLQMAAINDYGFG KPEIPSSSSMPFFLAVDPQQLKLRNETNVSSTSSNIPSDSASPNLKNGTDPLLMPFNSYM ADWSSDKITYTTLNT

Transcript Sequence

Transcript ID	Zm00001d038302_T080
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:153946212:153956350:-1 gene:Zm00001d038302 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein ROS1
Sequence	GCCCACGGTGGTGCGTCCTCTCCGAGACACCGCTCGCCGGACCTCTTCCGAGTTTGGGAA ACTCTGGCGCCATGAATCCAATAGTATAGCACACGTCGCATGGGAGAAGGCACATTCCAA GAGCAGATGATCCACACACACGGTTTCAGCCCGGTGGCCCAACGGCGCAGCTATCACCAT CCAGTAACATCCCCGGAATTCACCCCTGCCTTCTGTTCTGCTGTTCACCCCGCGTGCGCG TTCTTCCTCTCGTGCGACAACTGGGCGACCGCCGCCGTCCTACGGCAGGTGGTCACTTCT TCGTCGGTTCCTTCGCTGGCGACGAGCACCCACCAAGCCCTGGAAGAAGCAAGGATTCAC CCTCAAGCTCGAAACTGAACGCAACTCCCGAAGACCCGGTGAAGCCATGTCTGCGGGGAG AGGCGATCCAAACACCCCTGCCAACAGGCCTCTGTTCCTGAGTGCTGGGGTGCCCAACTT AGGCTGTCACAATGTTGCAGCTCCAGCTGCAGCAGGCAACAGCGGCTCGATCGCCTCGCA AGTCTTATTCTCCCCATGCTCCACGTCTGTCCTGAATACTATTCAGGAGGTTCCTGCTCC ACAATCTGCTCTGTTGAGTCCGATAAACCGTGCAACTGAACAAGGTGATGTGCCCTGCAT CCAGCCATCCTGGAATATGCCTGGGGGTTGCACGCAGGTGCCTATTAATATCATAGTGTT CCATAGGGAACTCACTAGAAGGGGTTCGAGGCCGCAGTTGTCGCCGTCGGCCACTGCCTT ACCTGATGTTTCAGAGGGAGCTTCCATTCGGCTTGCTGGGAGTAATTTCTTGTCACATGG AAGAACACCTAGCATCGTTGCAGGTGATATGACAACGAATTCTTCACAGCTAGCCACTGC AGATAAATACAATTCAGAGCATCGGATGAATTGTTTACATGATGAAGCATCCAAGACTGA AAATGGAAAAGGAAGTACCCAACTTCCACAATTAGCAACAGCAATTTTCCGTGACAGCTA CAATGATTTGGAATCAGTGGTTCCTGCAGCTACCTGGGAAACACGAGTGCAACATTCTCA AGAATCAACCACCTGTCTTGCAGAAAGTACCACTGATGACAACATTCATATGTACCAATC TATGCAAAAAAGGCTCAAGACACAAATCAACAAGAGTGAACACACACCATTGTCAGCACC AACTGTACCCAAGGAGAAAACACTGACTCAAATTGAGACGCAGCTAGCAAGTGCCGAGAA AACCGAAATGTTCAGGAATGAGGAAACCCCAGCGCTGAAAATGAAGGCTCGGAAGAAAAA ACACAGACCAAAGGTAATCAGAGAGAATAAGCCAGCCAAAGTGCAGAAACCTGATTCAAC ACCAGATGGAAAATCTCCGAACCAAAAGGTCAAGAGAAGTTATGTCCGGAAGAAAAGAAA CCTCAGCTCTCTGGAGAATTGCTCTGGTCCTGTTAGCGATCAATCAATCTCTGGAGCAAC AGGAGTTGCAGCTAGAAGCAGAACATCATCAGTTCGACGAAGTCTGCAATTTGAATCCAA AGAACAAGGATTGCAGGGCGGCCATTCGTCAATGGCCAACATACACCATCACAACTATGA GAAACCTGGCCATGCTCAAAGTTCTTTCTACTCAGAGTCAGAAGTGCAGACTGGGCGTGT GATGCAAGAAGGTATGGAGAATTCACCAGGAGAATTAGCTTTCGACATGAGTCGCAGACT GAACAAATTTTTAGATGAGTACATACATTTGCCAGATATGCTAAAACCTACACAAGAAGT TTCGGCTGCAACTTCTGCATCATTTAGTACGGAACTGGCAAGGGAAGAAGATAATGTGGG AAGAACTTGCAAACCTGATGGCAAAAGTAAGTGCAGTTTGTTTGCTGATGAAAGGGTGGT AAACCCCACAATAGAAGGGAACAAAAAGGACTTGGAATTAAACTATTCTGATGCTGATGG TCTTGTTTCCTCAGCTAGGTCTTTACCTCAAATGGATCCCACAAGAAGTCAGATGGGTAA GGTGTCGGAAGTGGAAAACCCCACACACCATAGCAATGGTTCGCTACCTGGCACACGGGA CTCTGTTGTCTTGAGGGCTGCAGCTGAGATGTTCGCATTTTTCCAAGCGGGTGCAATAAA AAAGAAGCGATCTGCCCGACTCCGCAGAAATTCCCCCTTTTATACTATGGATCTTAAGAA TAATACTCTACAAGCATCAACAAGACTGCCACAGCCATGCATGGATGCGCTGCATAGAAG TTCTTGCATTAAGTTTTTGACCAAAAAACGTTCAGAAAAGGCAAGACCGCACTGTTCCAG TGTAATTCAACCAAATGATGAGCTGAAGGACAGGCTTTCAGCTGGAAGCACTTTTTATGG CGCAACTAATGGATGCAAAATATCAGAAGAGAGTTCTCCAAACTTTTCATCTCAGACCCT GGACAATAAAAGAATCAACGTTGATACTCATTGTGAAGTAGCAGAAGGGAGATCAACCAA CACATCAACAGGACCCTATATGGATTACGTTCAAGGAGTTGCATCAAAGTTGAAGCATCT TGATTTGAATACTGAACAGGTGCAGAGAACTGAGATGCATTTATCTCTGACCACACCAGC TGTTATTTCTTTTGAGGGAACAAGTGGTCCTTCAAATGCTCTTGTCCCATATGGTGGTGT GGTGATGGTTCCCAATGAGAGGCCCTTGCAGTTAGTCAAAAAGCAGCGGCCTCGTGCTAA GGTTGACTTGGATTTTGAGACGACGAGGGTTTGGAACCTTTTGATGGGGAAATCAGCCGA GTCTTATGGGACTGATGTTGAAAAGGAGAGATGGTGGCAGCAAGAAAGAGAAGTGTTTCA AAGCCGTGCTAATTCGTTTATAGCACGCATGCGACTTGTTCAAGGGGACAGGCGCTTTTC TCCTTGGAAAGGATCTGTAGTCGATTCTGTAGTAGGAGTGTTCCTCACTCAGAATGTAGC TGATCATCTTTCAAGCTCTGCCTATATGGCCCTTGCCGCAAGTTTTCCTTCACGGCCAGT CAACAATAATTGTAAGGATGATGGTACCACAGAAGACAATAAACAAACCACCAGGATGAG TGAGCTAGTAGGAGAGAAAAGTGTGTTTGACCTTTTCTACAATGGTGTTAGACCTGATCT AGAAGTGGGATGTGAGGAGGTATCAATGACTTGCAAGAAGACACACATGGAACCAACAGA CAATACTAGGGATAGTGAATTTATTGAAGGTGAAACCTATTCCTTTGATTACAAATCAAC AGATGAAAGCGTTTGCAATCACAAAGGGATAGGTATAGAACATAAAGAACAACAATTACC AGATTTCTCCTCAGCAGAATTAACTGTGTCTACAGAACTCGTGCAGCAGATACAAATCCA GAAGATCTCATCCTCTCAAATTTTAACTTCAGAAACCATACAATCAAGATTATCTTTGAG TTCTGAGATACCTAGAAATTTTGTTTGTGGTGGTTCTGCTGCAGCTTATCAGCAGCTGGG AAGCAATTTCGACCAGGGAAGCTCATTAACAGAAAATGATGCCACAGCCAGTGAAATTGA ATGTCACAGACTCCAAATGGCTGCAATAAATGATTATGGATTTGGTAAACCTGAGATTCC TTCTAGTTCCTCAATGCCATTTTTCTTGGCTGTTGATCCTCAACAACTGAAATTGAGAAA TGAGACAAATGTTTCTTCAACATCTTCCAACATTCCTTCAGATTCTGCATCACCAAACTT GAAAAATGGCACGGATCCTCTTTTGATGCCATTTAATTCCTACATGGCAGATTGGAGCAG CGATAAGATAACTTACACCACTCTGAACACT