Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d038271_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:6:152900601:152903680:-1 gene:Zm00001d038271 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycosyl hydrolase family protein
Sequence

ATGAGACCTTACCCGGATTGTATGGCTCAAGGGGTGGCAACAGTAATGACGTCCTACTCT
AAATGGAATGGGGAGCCATTGCATTCGAGTCGCTACTTGTTAACAGATGTTCTGAAGGGC
AAGTTAGGCTTTAAGGGTTTTCTCATTTCAGATTGGGAGGGCATTGACAGGATCTGTGAG
CCTCGAGGGTCTGATTATCGCTATTGCATTGCACAATCAGTAAATGCAGGAATGGACATG
ATTATGATACCTCATAGGTTTGAGAAATTTTTGGATGATATTGTGTTCTTGGTGGAGGCG
GGGGAGATACCAATGTCTCGTATTGATGACGCTGTTGAACGAATTCTGAGGGTCAAGTTT
ATTTCTGGAGTGTTTGAGCATCCATTTTCAGACCAATCTCTACTGGACATAGTTGGTTGT
AAGGAACATCGATTACTAGCGCGTGAAGCTGTTCGCAAGTCTTTGGTACTTCTGAAAAAT
GGCAAGGATCAGAAGGAGCCATTTCTTCCATTGGCCAGAGATGCAAAAAGAATACTGGTT
GCAGGAACACATGCTGACGATATTGGATATCAATGTGGTGGCTGGACGATAGCGTGGCCT
GGAGACAGTGGAAAAGTAACTCTTGGTACAAGCATATTGGAGGCCATACAAGAATTAGTG
GGAGTGCAAACTGAAGTTGTGCATGAGAAATACCCAACCAAAGCTATGATTGAAACTGGG
GGTTTTTCCTATGCGGTGGTGGTTGTTGGAGAGGTTCCATATGCTGAATGGATAGGAGAT
AGAACTGACCTTAGTATCCCGTTTAATGGCTCTGACCTTATCATCCGTGTTGCAAGTAAA
ATCCCTATCCTAGTGATTGTTATTTCTGGAAGGCCATTGATTATTGAGTCACAAGTTTTG
GAAAAGATAGATGCTCTAGTCGCTGCCTGGCTGCCTGGAAGTGAAGGCATGGGAATTACC
GATTGCCTCTTTGGAGATCATGATTTTGTGGGCACATTGCCTGTGACATGGTATAAGTCT
GTTGATCAATTGCCTATAAATGCTGGAGACTCTAACTATGACCCGTTATTCCCTGTTGGA
TATGGGCTGAAAATGTTTCGAAGTGATGATGATTCAACATAA

Peptide Sequence

PEP ID

Zm00001d038271_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:6:152900601:152903680:-1 gene:Zm00001d038271 transcript:Zm00001d038271_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycosyl hydrolase family protein
Sequence

MRPYPDCMAQGVATVMTSYSKWNGEPLHSSRYLLTDVLKGKLGFKGFLISDWEGIDRICE
PRGSDYRYCIAQSVNAGMDMIMIPHRFEKFLDDIVFLVEAGEIPMSRIDDAVERILRVKF
ISGVFEHPFSDQSLLDIVGCKEHRLLAREAVRKSLVLLKNGKDQKEPFLPLARDAKRILV
AGTHADDIGYQCGGWTIAWPGDSGKVTLGTSILEAIQELVGVQTEVVHEKYPTKAMIETG
GFSYAVVVVGEVPYAEWIGDRTDLSIPFNGSDLIIRVASKIPILVIVISGRPLIIESQVL
EKIDALVAAWLPGSEGMGITDCLFGDHDFVGTLPVTWYKSVDQLPINAGDSNYDPLFPVG
YGLKMFRSDDDST

Transcript Sequence

Transcript ID

Zm00001d038271_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:152900601:152903680:-1 gene:Zm00001d038271 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycosyl hydrolase family protein
Sequence

CACAACACAACGCCCATCTCTTTCGTCTCCGCTCCCTTCTGCTCACCCGCACGATGGCGC
CGGAGGCGCGAGGTGAGGCGGCGCCGGTGTACAGGGACGCATTGACGCCGGTGGAGGAAA
GGGTGCGAGACCTGCTGGGCCGCATGACGCTGCGTGAGAAGGCGGCGCAGATGGCCCAGA
TCGAGCGCACCGTCGCGACGCCGCGCGCCCTCACGGAGCTCGGGGCCGGCAGCGTTCTCA
ACGCCGGGGGAAGCATGCCCTGCGAGCAAGCCTCCCCCGCCGACTGGGCCGCCATGGTTG
ACGGCTTCCAGCGCCTTGCGATCTCCTCCCGCCTCGGCGTCCCCATCCTCTACGGCACCG
ACGCCGTCCACGGCCACAACAACGTCTACGGCGCCACCGTGTTCCCCCACAATGTCGGTC
TCGGGGCCTGCAGGTACTGATCGATTCGATCCACAGACGTTCTGTGTAATGGCCGCGTCA
CTGCACTACCCCTAGGCCCTATGCTTTGTCCGTTAGGCAACCATATACTGTTGACCTCAC
AGGGACGGAGAGCTCGCGCGTAGGATCGGCGAGGCGACGGCGCTTGAGGTTCGCGCCACT
GGCATCCACTGGACCTTCGCGCCATGCGTCGCCGGTCTGTCGGGATCCTAGGTGGGGTAG
ATGCTACGAAAGCTACAGCGAGGACCCAGAAATCGTGCGCTCGTTGACCACCATTGTCAG
CGGTTTGCAGGGGCAGCCGTCAGCGGACCATCCTCATGGTTACCCCTTCCTCGCTTCGCC
TAGGGAGAATGTACTTGCTTGCGCTAAGCATTTCGCAGGGGATGGCGGCACGGACAAGGG
GGTCACTGAGGGGAACGCCATTTGCTCCTATGAGGATTTGGAAGCAATCCATATGAGACC
TTACCCGGATTGTATGGCTCAAGGGGTGGCAACAGTAATGACGTCCTACTCTAAATGGAA
TGGGGAGCCATTGCATTCGAGTCGCTACTTGTTAACAGATGTTCTGAAGGGCAAGTTAGG
CTTTAAGGGTTTTCTCATTTCAGATTGGGAGGGCATTGACAGGATCTGTGAGCCTCGAGG
GTCTGATTATCGCTATTGCATTGCACAATCAGTAAATGCAGGAATGGACATGATTATGAT
ACCTCATAGGTTTGAGAAATTTTTGGATGATATTGTGTTCTTGGTGGAGGCGGGGGAGAT
ACCAATGTCTCGTATTGATGACGCTGTTGAACGAATTCTGAGGGTCAAGTTTATTTCTGG
AGTGTTTGAGCATCCATTTTCAGACCAATCTCTACTGGACATAGTTGGTTGTAAGGAACA
TCGATTACTAGCGCGTGAAGCTGTTCGCAAGTCTTTGGTACTTCTGAAAAATGGCAAGGA
TCAGAAGGAGCCATTTCTTCCATTGGCCAGAGATGCAAAAAGAATACTGGTTGCAGGAAC
ACATGCTGACGATATTGGATATCAATGTGGTGGCTGGACGATAGCGTGGCCTGGAGACAG
TGGAAAAGTAACTCTTGGTACAAGCATATTGGAGGCCATACAAGAATTAGTGGGAGTGCA
AACTGAAGTTGTGCATGAGAAATACCCAACCAAAGCTATGATTGAAACTGGGGGTTTTTC
CTATGCGGTGGTGGTTGTTGGAGAGGTTCCATATGCTGAATGGATAGGAGATAGAACTGA
CCTTAGTATCCCGTTTAATGGCTCTGACCTTATCATCCGTGTTGCAAGTAAAATCCCTAT
CCTAGTGATTGTTATTTCTGGAAGGCCATTGATTATTGAGTCACAAGTTTTGGAAAAGAT
AGATGCTCTAGTCGCTGCCTGGCTGCCTGGAAGTGAAGGCATGGGAATTACCGATTGCCT
CTTTGGAGATCATGATTTTGTGGGCACATTGCCTGTGACATGGTATAAGTCTGTTGATCA
ATTGCCTATAAATGCTGGAGACTCTAACTATGACCCGTTATTCCCTGTTGGATATGGGCT
GAAAATGTTTCGAAGTGATGATGATTCAACATAACTTTATTATTGATTGGGTACATTTGG
ATCTCTGTGATATTAAATACTCTTTATTTACTAGCTATTGGTACTTAAAACCAAATAATA
TATTGTTG