Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d038269_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:6:152840908:152842890:-1 gene:Zm00001d038269 gene_biotype:protein_coding transcript_biotype:protein_coding description:UPF0503 protein chloroplastic
Sequence

ATGACGCTGCAGATGGAGCCGCCGGTGCCGCCGCCGCGGCGGTCGGTGTCGACGACCTGC
GACCTCCACCCAGGAGAAACCTTCACGGGCTTCTGCGCCGCCTGCCTCCGCGAGCGCCTC
GCGGGGCTCGAGTCCACCGGCGGCTCCGCCGCGGCCGCCGCGCCGGGCCGCAGGTCCACC
TCCGCCATCCGCTCGCTCTTCACCCGCCCGTTCGCCGCCGCCGCCGGCGGGGCTCCGTCG
GGATCCGGCGCCGCCGCGCTGCCGGACCTCCGCCGCTGCAAGTCCTTCTCCTGCGGGCGC
GGGGGCGACGCGCTGGCCGCCGCGGGCGAGCCGCAGCGGAGGTCGTGCGACGTGCGCGGG
CGGAGCACTCTCTGGGCGCTGTTCCACCAGGACGACCGCCAGCGGGTTCGCGACGGCACC
GCGTTCGGCGCCTTCCCGGCCTCGTCCTCCGCCGCCGCGGCCGCGCTCGCCGCCGAGGTC
CTCCCGCCCCCGCAGCCGCCACCTCCCGCGTGCGTCCCTGAGATGTTCTCGGAGGAGGAG
ATCGCTGTGGCCGAGGACTCTGACGAGATTGTCGCGGTGATGGAGCCCGTCTCAGTCGTG
GGCACCTCTGGGGAGATGGAGACGGAGGTGAGTGCGGCGCGGGACGTTAGGGCCATGAAG
GATCACATAGATCTCGAGGCCTCGCAGTCGCAGCAGCCCAGGAAGCTGCCGCCCAAGGAC
CTCAAGGAGATGGCCGGGAGCTTCTGGCTTGCCGCCTCCATGTTCAGCAAGAAGTGGCAG
AAGTGGAGGGGCAAGCAGAAGCTCAAGAAGCAGGAGGCCGCGGGCAGCAAGGCGGCGGCG
GCGGCAATGCCCCCGCCGGAGAAGCCATCCAAGCCCTCGTTCCTCCGGCGTAGCCGCTTC
CGCCGTGGCGAAGCCGGCTCCGAGTTCGCCGGCGGCCGGCGCTCGTGCGACACCGACCCA
CGATTCTCCTTGGACGCCGGCCGCATGTCCGTCGGTGACATGGGCTTCTCCTGGGACGAG
CCCCGTGCGTCGTGGGACGGCTACCTGTTCGGCGCCGGCACCGGCATTGGTCTCGGCCGC
GCGCCGCCGCTCTCCCGTCTTCCTCCTATCCTCTCGGCTATGGAGGACTCCCCCGCCGGC
ATTCTGGAGCGCTCCGACGGCCAAATCCCCGTGGAGGACGACTCCCAGCCGGAGCCCGAC
CACGACGCAAACGTCCCTGGGGGCTCGGCCCAGACGCGAGATTACTACATGGACACCTCA
AGCCGGAGGCGCCGGAGCCTTGACAGGTCGAGCTCTGTGCGGAGGTCCTTTGAAGTCACC
GACCCAAAGCCAGTGCCAGTGCCAGTACCAGTACCTGTTCCAGTGACCGCACCGGCCGCC
ATTGTCAACGGCAAGGAATCCCCTGCAATGGGCAGCTCGGAGTTCTACCACTTCCACCAC
GCCGAAGACCTGTTCGACCACCGCTTCAGCACCAACTCACTCGTCGAGGACTTCTCCGCC
AGCCTGGACGCTGCCTTCCACGGCCCCGCGAAGAAGCCGCCGCGGTGGCGCAAGGCGTGG
AGCCTCTGGGGCCTGATCCACCGCCGCGCCGCGGGGCGCAGGGACGGCGCGTCCGACGCC
GCCGACCGCGCGTTCTCGGAGCCATGGCCGGACCTGCGCGTCCGCGGGTACAACGGCAGG
ATGCAGCGGTGCAACAGCAACGCCAGCGCGCGGAGCTCGTTCAGCAGCAACAGCGGCGGT
CTGGGCAGCTCCAGGCGCAGCTACCTGGACGCCCACGGGAAGCGGAGGCGCGAGGAGTGC
GCGGCGCTGGAGCGGAACCGTAGCGCGCGGCACTCGCCGGGCAACGCGGACAACGGCCTG
CTGCGGTTCTACCTCACGCCGATCCGGAGCGCCAGCGGCCGCCGGACAGGCGTCCTCCCG
GTGAAAGGCGGTCGGCAGCTGAGGTCGCAGTCGTTCGCGCGGACGATGCTGGGGCTGTAC
TAG

Peptide Sequence

PEP ID

Zm00001d038269_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:6:152840908:152842890:-1 gene:Zm00001d038269 transcript:Zm00001d038269_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:UPF0503 protein chloroplastic
Sequence

MTLQMEPPVPPPRRSVSTTCDLHPGETFTGFCAACLRERLAGLESTGGSAAAAAPGRRST
SAIRSLFTRPFAAAAGGAPSGSGAAALPDLRRCKSFSCGRGGDALAAAGEPQRRSCDVRG
RSTLWALFHQDDRQRVRDGTAFGAFPASSSAAAAALAAEVLPPPQPPPPACVPEMFSEEE
IAVAEDSDEIVAVMEPVSVVGTSGEMETEVSAARDVRAMKDHIDLEASQSQQPRKLPPKD
LKEMAGSFWLAASMFSKKWQKWRGKQKLKKQEAAGSKAAAAAMPPPEKPSKPSFLRRSRF
RRGEAGSEFAGGRRSCDTDPRFSLDAGRMSVGDMGFSWDEPRASWDGYLFGAGTGIGLGR
APPLSRLPPILSAMEDSPAGILERSDGQIPVEDDSQPEPDHDANVPGGSAQTRDYYMDTS
SRRRRSLDRSSSVRRSFEVTDPKPVPVPVPVPVPVTAPAAIVNGKESPAMGSSEFYHFHH
AEDLFDHRFSTNSLVEDFSASLDAAFHGPAKKPPRWRKAWSLWGLIHRRAAGRRDGASDA
ADRAFSEPWPDLRVRGYNGRMQRCNSNASARSSFSSNSGGLGSSRRSYLDAHGKRRREEC
AALERNRSARHSPGNADNGLLRFYLTPIRSASGRRTGVLPVKGGRQLRSQSFARTMLGLY

Transcript Sequence

Transcript ID

Zm00001d038269_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:152840908:152842890:-1 gene:Zm00001d038269 gene_biotype:protein_coding transcript_biotype:protein_coding description:UPF0503 protein chloroplastic
Sequence

ATGACGCTGCAGATGGAGCCGCCGGTGCCGCCGCCGCGGCGGTCGGTGTCGACGACCTGC
GACCTCCACCCAGGAGAAACCTTCACGGGCTTCTGCGCCGCCTGCCTCCGCGAGCGCCTC
GCGGGGCTCGAGTCCACCGGCGGCTCCGCCGCGGCCGCCGCGCCGGGCCGCAGGTCCACC
TCCGCCATCCGCTCGCTCTTCACCCGCCCGTTCGCCGCCGCCGCCGGCGGGGCTCCGTCG
GGATCCGGCGCCGCCGCGCTGCCGGACCTCCGCCGCTGCAAGTCCTTCTCCTGCGGGCGC
GGGGGCGACGCGCTGGCCGCCGCGGGCGAGCCGCAGCGGAGGTCGTGCGACGTGCGCGGG
CGGAGCACTCTCTGGGCGCTGTTCCACCAGGACGACCGCCAGCGGGTTCGCGACGGCACC
GCGTTCGGCGCCTTCCCGGCCTCGTCCTCCGCCGCCGCGGCCGCGCTCGCCGCCGAGGTC
CTCCCGCCCCCGCAGCCGCCACCTCCCGCGTGCGTCCCTGAGATGTTCTCGGAGGAGGAG
ATCGCTGTGGCCGAGGACTCTGACGAGATTGTCGCGGTGATGGAGCCCGTCTCAGTCGTG
GGCACCTCTGGGGAGATGGAGACGGAGGTGAGTGCGGCGCGGGACGTTAGGGCCATGAAG
GATCACATAGATCTCGAGGCCTCGCAGTCGCAGCAGCCCAGGAAGCTGCCGCCCAAGGAC
CTCAAGGAGATGGCCGGGAGCTTCTGGCTTGCCGCCTCCATGTTCAGCAAGAAGTGGCAG
AAGTGGAGGGGCAAGCAGAAGCTCAAGAAGCAGGAGGCCGCGGGCAGCAAGGCGGCGGCG
GCGGCAATGCCCCCGCCGGAGAAGCCATCCAAGCCCTCGTTCCTCCGGCGTAGCCGCTTC
CGCCGTGGCGAAGCCGGCTCCGAGTTCGCCGGCGGCCGGCGCTCGTGCGACACCGACCCA
CGATTCTCCTTGGACGCCGGCCGCATGTCCGTCGGTGACATGGGCTTCTCCTGGGACGAG
CCCCGTGCGTCGTGGGACGGCTACCTGTTCGGCGCCGGCACCGGCATTGGTCTCGGCCGC
GCGCCGCCGCTCTCCCGTCTTCCTCCTATCCTCTCGGCTATGGAGGACTCCCCCGCCGGC
ATTCTGGAGCGCTCCGACGGCCAAATCCCCGTGGAGGACGACTCCCAGCCGGAGCCCGAC
CACGACGCAAACGTCCCTGGGGGCTCGGCCCAGACGCGAGATTACTACATGGACACCTCA
AGCCGGAGGCGCCGGAGCCTTGACAGGTCGAGCTCTGTGCGGAGGTCCTTTGAAGTCACC
GACCCAAAGCCAGTGCCAGTGCCAGTACCAGTACCTGTTCCAGTGACCGCACCGGCCGCC
ATTGTCAACGGCAAGGAATCCCCTGCAATGGGCAGCTCGGAGTTCTACCACTTCCACCAC
GCCGAAGACCTGTTCGACCACCGCTTCAGCACCAACTCACTCGTCGAGGACTTCTCCGCC
AGCCTGGACGCTGCCTTCCACGGCCCCGCGAAGAAGCCGCCGCGGTGGCGCAAGGCGTGG
AGCCTCTGGGGCCTGATCCACCGCCGCGCCGCGGGGCGCAGGGACGGCGCGTCCGACGCC
GCCGACCGCGCGTTCTCGGAGCCATGGCCGGACCTGCGCGTCCGCGGGTACAACGGCAGG
ATGCAGCGGTGCAACAGCAACGCCAGCGCGCGGAGCTCGTTCAGCAGCAACAGCGGCGGT
CTGGGCAGCTCCAGGCGCAGCTACCTGGACGCCCACGGGAAGCGGAGGCGCGAGGAGTGC
GCGGCGCTGGAGCGGAACCGTAGCGCGCGGCACTCGCCGGGCAACGCGGACAACGGCCTG
CTGCGGTTCTACCTCACGCCGATCCGGAGCGCCAGCGGCCGCCGGACAGGCGTCCTCCCG
GTGAAAGGCGGTCGGCAGCTGAGGTCGCAGTCGTTCGCGCGGACGATGCTGGGGCTGTAC
TAG