Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d038262_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:6:152608623:152611425:-1 gene:Zm00001d038262 gene_biotype:protein_coding transcript_biotype:protein_coding description:Patellin-1
Sequence

ATGGCCGACGAGACGAAGCAAGAAGCCGCCGCCCCGGCGGCCGAGGTGGTCGTGACGGAG
GAGGAGAAGAAGGCAGAAGAGACCGCCCCGGTGGCGGAGGAAAAGGCCGTGGAGGCGGCT
GTAGAGAAGGCCGCGGAGGCGGAGGCGGGGGCCGAGGAAAAGGCCGCGGAAGCGGACTCG
GAGGAGGAGAAGAAGGCGGAGGAGGCCGAGGAGGCCGCCGCGGGCGATGAGGCGGCCGTG
ATCGATGGCACTGGGTCGTTCAAGGAGGAGAGTAACCTGGTGTCCGAGCTCCCCGACCCT
GAGCGCACAGCGCTCGCGCAGCTCAAGGAGCTCGTCGCCACCGCGCTCGCTAACGGGGAG
TTCAACCTGCCGCCGCCGCCAGCCAAGGAGGAGGCCAAGAAGGAGGAGCCGGCAAAGGAA
GAAGCTCCGGCGGACAAGGAGGACGAGCCCAAGGCAGAGGAGGCGGCTGCCCAAGAGCCC
GTCAAGGAGGAGGCCAAGCCTGAGGAGCCCAAAACGGAGGCGCCGGCGGAAGCAGCGCCC
GAGGAGGTTAAGGACGAGACACCCGTGCCGGAAGAGACCAAGACTGAGGCTCCCGCGCCG
GAGGAGCCCAAGGCCGAGGAGCCTGCCAAGGAGGAGCTCAAGGCAGAGGCGGCGACGGAA
GCGGTCGCCGAGGAGACCAAACCAGCTGAGCCGGTGCCGGAGGAGGAGGAGAAGACGGTC
GTTGTTGCCGAGGAGGAGGCCACCAAAACGGTGGAAGCCATCGAGGAGACGGTCGCCGTC
GCCGTCGCCGCCGCCGCGTCCGAGGAGCCCGAGGCGGGCGAGCCGAAGGAGGAGCTGATC
TGGGGCGTGCCGCTGGCGGGCGACGACGAGCGCACGGACACGGTGCTGCTCAAGTTCCTC
CGCGCGCGCGAGTTCAAGGTGAAGGAGGCGATGGCGATGCTCAAGTCGGCGGTGCTGTGG
CGCAAGCGGTTCGGCATCGACGAGCTCCTCCTGGACGCCGACCTCGGCCTGCGGGAGCTG
GAGGGCGTGGTGTTCTACCGCGGCGCCGACCGCGAGGGCCACCCGGTCTGCTACAACGTG
TACGGCGAGTTCCAGGACAAGGAGCTGTACGAGAGGGCCTTCGGCGACGAGGAGAAGCGG
GAGCGCTTCCTCAAGTGGCGCATCCAGCTCCTGGAGCGCGGCATCCGGGAGCAGCTCGAC
TTCTCGCCCAGCGGCATCTGCTCCATGGTGCAGGTCACCGACCTCAAGAACTCGCCGCCC
ATGCTCGGCAAGCACCGCGCCGTCACGCGCCAGGCTCTCGCCCTGCTACAGGACAACTAC
CCGGAGTTCGTGGCCAAGAAGGTGTTCATCAACGTGCCGTGGTGGTACCTGGCGGCAAAC
AAGGTGATGAGCCCATTCCTGACTCAGCGCACCAAGAGCAAGATCGTCTTCTGCAGCCCC
GGCAAGTCGGCGGAGACCCTCTTCAGGTACATCGCCCCGGAGCAAGTCCCCGTCCAGTTC
GGCGGCCTGTACAAGGAGGACGACACCGAGTTCTCCACCTCCGACGCCGTCACCGAGCTC
ACCGTGAAACCGTCCTCCAAGGAGACCGTCGAGATCCCAGCCACCGAGAACTCCACCGTG
GTGTGGGAGCTCCGCGTGCTGGGGTGGGAGGTGAGCTACGGCGCCGAGTTCACCCCCGAC
GCGGAGGGCGGCTACACCGTCATCGTGCAGAAGACGCGGAAGGTCCCCGCCCACGAGGAG
CCCATCATGAAGGGCAGCTTCAAGGCCACGGAGCCCGGCAAGCTGGTGCTGGGCGTGAAC
AACCCGGCGTCCAGGAAGAAGAAGCTGCTGTGCCGGTTCAAGGTGAGGAGCGCCGCCGCC
TGA

Peptide Sequence

PEP ID

Zm00001d038262_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:6:152608623:152611425:-1 gene:Zm00001d038262 transcript:Zm00001d038262_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Patellin-1
Sequence

MADETKQEAAAPAAEVVVTEEEKKAEETAPVAEEKAVEAAVEKAAEAEAGAEEKAAEADS
EEEKKAEEAEEAAAGDEAAVIDGTGSFKEESNLVSELPDPERTALAQLKELVATALANGE
FNLPPPPAKEEAKKEEPAKEEAPADKEDEPKAEEAAAQEPVKEEAKPEEPKTEAPAEAAP
EEVKDETPVPEETKTEAPAPEEPKAEEPAKEELKAEAATEAVAEETKPAEPVPEEEEKTV
VVAEEEATKTVEAIEETVAVAVAAAASEEPEAGEPKEELIWGVPLAGDDERTDTVLLKFL
RAREFKVKEAMAMLKSAVLWRKRFGIDELLLDADLGLRELEGVVFYRGADREGHPVCYNV
YGEFQDKELYERAFGDEEKRERFLKWRIQLLERGIREQLDFSPSGICSMVQVTDLKNSPP
MLGKHRAVTRQALALLQDNYPEFVAKKVFINVPWWYLAANKVMSPFLTQRTKSKIVFCSP
GKSAETLFRYIAPEQVPVQFGGLYKEDDTEFSTSDAVTELTVKPSSKETVEIPATENSTV
VWELRVLGWEVSYGAEFTPDAEGGYTVIVQKTRKVPAHEEPIMKGSFKATEPGKLVLGVN
NPASRKKKLLCRFKVRSAAA

Transcript Sequence

Transcript ID

Zm00001d038262_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:152608623:152611425:-1 gene:Zm00001d038262 gene_biotype:protein_coding transcript_biotype:protein_coding description:Patellin-1
Sequence

ACAAATCTCTCCTGCTCCACTCTTCTCCACGTCCATCCCGCGCCCCGAATTTCCCGAGCC
AACTCCGCCCCGCCCTGTCGCTTTCCCTTCCACACGCGCCGTTCGCTTTGATCGATCAGG
CAGGCATGGCCGACGAGACGAAGCAAGAAGCCGCCGCCCCGGCGGCCGAGGTGGTCGTGA
CGGAGGAGGAGAAGAAGGCAGAAGAGACCGCCCCGGTGGCGGAGGAAAAGGCCGTGGAGG
CGGCTGTAGAGAAGGCCGCGGAGGCGGAGGCGGGGGCCGAGGAAAAGGCCGCGGAAGCGG
ACTCGGAGGAGGAGAAGAAGGCGGAGGAGGCCGAGGAGGCCGCCGCGGGCGATGAGGCGG
CCGTGATCGATGGCACTGGGTCGTTCAAGGAGGAGAGTAACCTGGTGTCCGAGCTCCCCG
ACCCTGAGCGCACAGCGCTCGCGCAGCTCAAGGAGCTCGTCGCCACCGCGCTCGCTAACG
GGGAGTTCAACCTGCCGCCGCCGCCAGCCAAGGAGGAGGCCAAGAAGGAGGAGCCGGCAA
AGGAAGAAGCTCCGGCGGACAAGGAGGACGAGCCCAAGGCAGAGGAGGCGGCTGCCCAAG
AGCCCGTCAAGGAGGAGGCCAAGCCTGAGGAGCCCAAAACGGAGGCGCCGGCGGAAGCAG
CGCCCGAGGAGGTTAAGGACGAGACACCCGTGCCGGAAGAGACCAAGACTGAGGCTCCCG
CGCCGGAGGAGCCCAAGGCCGAGGAGCCTGCCAAGGAGGAGCTCAAGGCAGAGGCGGCGA
CGGAAGCGGTCGCCGAGGAGACCAAACCAGCTGAGCCGGTGCCGGAGGAGGAGGAGAAGA
CGGTCGTTGTTGCCGAGGAGGAGGCCACCAAAACGGTGGAAGCCATCGAGGAGACGGTCG
CCGTCGCCGTCGCCGCCGCCGCGTCCGAGGAGCCCGAGGCGGGCGAGCCGAAGGAGGAGC
TGATCTGGGGCGTGCCGCTGGCGGGCGACGACGAGCGCACGGACACGGTGCTGCTCAAGT
TCCTCCGCGCGCGCGAGTTCAAGGTGAAGGAGGCGATGGCGATGCTCAAGTCGGCGGTGC
TGTGGCGCAAGCGGTTCGGCATCGACGAGCTCCTCCTGGACGCCGACCTCGGCCTGCGGG
AGCTGGAGGGCGTGGTGTTCTACCGCGGCGCCGACCGCGAGGGCCACCCGGTCTGCTACA
ACGTGTACGGCGAGTTCCAGGACAAGGAGCTGTACGAGAGGGCCTTCGGCGACGAGGAGA
AGCGGGAGCGCTTCCTCAAGTGGCGCATCCAGCTCCTGGAGCGCGGCATCCGGGAGCAGC
TCGACTTCTCGCCCAGCGGCATCTGCTCCATGGTGCAGGTCACCGACCTCAAGAACTCGC
CGCCCATGCTCGGCAAGCACCGCGCCGTCACGCGCCAGGCTCTCGCCCTGCTACAGGACA
ACTACCCGGAGTTCGTGGCCAAGAAGGTGTTCATCAACGTGCCGTGGTGGTACCTGGCGG
CAAACAAGGTGATGAGCCCATTCCTGACTCAGCGCACCAAGAGCAAGATCGTCTTCTGCA
GCCCCGGCAAGTCGGCGGAGACCCTCTTCAGGTACATCGCCCCGGAGCAAGTCCCCGTCC
AGTTCGGCGGCCTGTACAAGGAGGACGACACCGAGTTCTCCACCTCCGACGCCGTCACCG
AGCTCACCGTGAAACCGTCCTCCAAGGAGACCGTCGAGATCCCAGCCACCGAGAACTCCA
CCGTGGTGTGGGAGCTCCGCGTGCTGGGGTGGGAGGTGAGCTACGGCGCCGAGTTCACCC
CCGACGCGGAGGGCGGCTACACCGTCATCGTGCAGAAGACGCGGAAGGTCCCCGCCCACG
AGGAGCCCATCATGAAGGGCAGCTTCAAGGCCACGGAGCCCGGCAAGCTGGTGCTGGGCG
TGAACAACCCGGCGTCCAGGAAGAAGAAGCTGCTGTGCCGGTTCAAGGTGAGGAGCGCCG
CCGCCTGATGAGGGTCGTTGGTCTGGGTCCCAGCAGGTACAGCCTGCCAGCTGCTTGACC
ACCAGCCCGACATGTATAATTCGATCGATCGCCAACCAGGTCCATACCGCCACCATTTGA
ATGAACATGCTGCATTGCATTACATGATAGGAGAGAGAGAGAGAGAGAGAGAGGACAATA
AAGAGTTTCTGCTTCCTAGCTAGGCCCGTTCCGTGTCCTGGTCGTTCTTTGATTATTTGT
TGGCTTGCTGTTCTTTTTTTTCCTTGGGGGGAGGGTCGCGTTTGTATGTGTTTATTACTT
GAATGAAAACAAAAGTGAGCTTGTTATATGAGATAGCCATGGCTTGTTGAGGTC