Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d038260_T010
CDS Infomation

cds chromosome:B73_RefGen_v4:6:152553247:152556706:1 gene:Zm00001d038260 gene_biotype:protein_coding transcript_biotype:protein_coding description:FAM91A1-like protein
Sequence

ATGGTATACTTCGATGTCCCTGTTTATCCTGATGATCGTTTTAGAGTTTCCAGGCTTGAA
GGTTTTGTTTCAAACAAGGATCAGTCCTACGAAGATCCAATTGAAGAGCTACTGTATGCT
GTATTCGTTGTATCAAGTGAAAATGCCACGGTTGCTGAACTGGCTACAACTTTACAAGTC
GACCTTTACCAGCTCCAGGCAGCTGCATCGTTTGCTTGCCGATTAGGATGGGCTGTGAAG
CTTCTGGATACCGACTCTGTTCTTAGGGATTCGAGCACTCCTGCACTGTCCAACAACATT
CTCAGCGATGAAGTTGAAAGCTCTCGTACGAGTGTCGCCTCAGAAAAGTCTGGTCATGAG
TTGCTTAGCAGTGATTCTGATGGACACAAGAACTCCGGGATGGCTTATGTGGGCTTCATT
GTCGATGCTAATGTAACTTCATACTTAATGATGGGCTCACTGTCTCCAGGTTTGAAGTCG
CATGCTGTGACACTATACGAGGCAGGAAAGCTTGGCGATTCTTGTATTGCTGATCTATGC
AATGATCTTGCCAGTTTAGAGGGGAAACGGTTTGAAGGTGTGCTGCAGGAATTCGCAAAC
CATGCTTTCAGCCTCCGATCCTTCCTCGAGTGCTTGCTGTCTGGCGGAACTTCAACTGAA
ACAGCTGACCTGACTACTAGTGAAGCAAATAACCAGGAGAGCTCTGTCCAGGACGGTTTA
GACACCACTTGTGCTAAGGAAAACAAGGGAAACGACGGTGTCGATAATGCTGCTGAGAAC
TCGACTCAAATTTCAGAATCCTCTGATGGTGGCCAACTATCACTGCAGGACAACAAGATG
GGTGATTCTGATGCTGCAGATGCGAATAGATCATCAGCATCTTCGACGATCGTGTCTGAA
GGCAAGGAAAGCATACTCAAACACGACTGTGACAGCGTCCAGGCTCCAAAGCTGGGTGCT
TCAGCTGCTAACGGTCCATCGTCCAAGAGCAAAAGAAGTTACCGAGTCAACATTCTTCGC
TGCGAGAGCTTAGCTTCTCTGGCCCCATCGACGCTAGAGAGACTCCTTGCTAGGGACTAC
GACATCGTAGTGTCCATGATCCCTCTCCCATCTTCCTCAGTCCTGCCCTGCCCATCTGGT
CTAGTGCATTTTGGTCCGCCTTCCTACTCTTCCATGACACCTTGGATGAAACTGGCGCTG
TACACATCAGGGACCTGTGGCCCGGTATCTGCCGTTTTCATGAAGGGGCAGCGGCTGAGG
TTGCTGCCTGAACCATTGGCCAGCTGCGAGAAGGCGCTGATATGGTCCTGGGATCAGTCT
GTGGTGGGCGGACTAGGCGGCAAGTTCGAAGGGAACTTGGTGAAAGGAAGCCTTCTTCTG
CACTACCTGAACTCGATGACAAAGCATTCTGCTGTGGTGGTGCAGCCATTAAGCGAACAC
GATCTTGACGAGACAGGGAGCATCGTCACCATAGACGTCCCGCTGCCGCTGAAAAATGCC
GATGGGTCGATTCCATCCACGGTAGTCGGCACCGACTTGCCGGAGGACCAGGTCTCGAGT
CTGATCCTCTTGTTAGAGGACCTGTCCAATAGAGTCGAGCTGAGCACGGTTGGGTACCTT
CGGTTGCTAAGGCTTCACAGGGCGAATGAGTCGTCCGAGCACGGAAGCTTTGAGTGGGTG
CCTCTGACCATAGAGTTCGGCATCCCTTTGTTTAGCCCACAGCTCTGCGAGAGGATCTGC
GAGAGGGTCGTCGAGTCACAGATGCTTCAGAAAGACGACATCGCTGAGCACTACGAGACG
ATGCAGAACGTGAGGAGGAGGCTGAGAGAGCTGTGCACCGAGTACCAAGCGACCGGCCCA
ACGGCGAGGCTGTTCAATCAGCGGGGAGGCTCCAAGAACAACTCCCCGCGCAAACTGGTG
CAGATTGTCAGCGGCAGATGGAGCCCGTTCCATGATCCGTCTACGCCCACTCACTCCAGT
AGCCCCCCCGCTGAACACGAAAGAGCCAAACCAGCGAGACGGCAGAGATGCTTCACCGAA
GTTCTGAGCTTTGATGGGAGGATCCTCAGGTCATATGCGCTCACTCCTGTGTATGAGGCT
GCTACAAGATCGGTCTCCGAAGAGCAGCCTACCACGCCCGCAGCGAAACCGGATCACGAG
GACGCCAACACCAAGGACGTGGCCTTGCCAGGAGTCAATCTGATATTCGATGGAACTGAG
TTGCACCCGTTTGACATCGTTGCCTGCCTCCAAGCTCGCCAGCCTCTCTCGTTGATCGCC
GAGGCGTCGGCCACATCTTTGGCAATGAAATGA

Peptide Sequence

PEP ID

Zm00001d038260_P010
PEP Infomation

pep chromosome:B73_RefGen_v4:6:152553247:152556706:1 gene:Zm00001d038260 transcript:Zm00001d038260_T010 gene_biotype:protein_coding transcript_biotype:protein_coding description:FAM91A1-like protein
Sequence

MVYFDVPVYPDDRFRVSRLEGFVSNKDQSYEDPIEELLYAVFVVSSENATVAELATTLQV
DLYQLQAAASFACRLGWAVKLLDTDSVLRDSSTPALSNNILSDEVESSRTSVASEKSGHE
LLSSDSDGHKNSGMAYVGFIVDANVTSYLMMGSLSPGLKSHAVTLYEAGKLGDSCIADLC
NDLASLEGKRFEGVLQEFANHAFSLRSFLECLLSGGTSTETADLTTSEANNQESSVQDGL
DTTCAKENKGNDGVDNAAENSTQISESSDGGQLSLQDNKMGDSDAADANRSSASSTIVSE
GKESILKHDCDSVQAPKLGASAANGPSSKSKRSYRVNILRCESLASLAPSTLERLLARDY
DIVVSMIPLPSSSVLPCPSGLVHFGPPSYSSMTPWMKLALYTSGTCGPVSAVFMKGQRLR
LLPEPLASCEKALIWSWDQSVVGGLGGKFEGNLVKGSLLLHYLNSMTKHSAVVVQPLSEH
DLDETGSIVTIDVPLPLKNADGSIPSTVVGTDLPEDQVSSLILLLEDLSNRVELSTVGYL
RLLRLHRANESSEHGSFEWVPLTIEFGIPLFSPQLCERICERVVESQMLQKDDIAEHYET
MQNVRRRLRELCTEYQATGPTARLFNQRGGSKNNSPRKLVQIVSGRWSPFHDPSTPTHSS
SPPAEHERAKPARRQRCFTEVLSFDGRILRSYALTPVYEAATRSVSEEQPTTPAAKPDHE
DANTKDVALPGVNLIFDGTELHPFDIVACLQARQPLSLIAEASATSLAMK

Transcript Sequence

Transcript ID

Zm00001d038260_T010
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:152553247:152556706:1 gene:Zm00001d038260 gene_biotype:protein_coding transcript_biotype:protein_coding description:FAM91A1-like protein
Sequence

TGGGGCGTTCGATTTGTCAACTTCACACTGGAAGAATTTAAGGTCAGATCCATTCATGGT
GATTTTTATTTCTGTCGAGAAAAAGAAAAAAAGAAATACAGTGCTATCTTCCTATCACGT
AAAGCATACATTGTTTGCTCTCAATGCAAAAAAAAAAAATACATTAGTAGTATCTTGCAT
TGATGGGAACTGATGCGCTACATTGCTGTAGAAGCTTTCAGAAGACGAGACATCAGCGAT
AGATAAAATATGTAAGGAGGAAGTCAATTCATATGTTCTATTTGACCCGGAGGTAGTACG
GGGCCTTTATAGGAGAGGGATGGTATACTTCGATGTCCCTGTTTATCCTGATGATCGTTT
TAGAGTTTCCAGGCTTGAAGGTTTTGTTTCAAACAAGGATCAGTCCTACGAAGATCCAAT
TGAAGAGCTACTGTATGCTGTATTCGTTGTATCAAGTGAAAATGCCACGGTTGCTGAACT
GGCTACAACTTTACAAGTCGACCTTTACCAGCTCCAGGCAGCTGCATCGTTTGCTTGCCG
ATTAGGATGGGCTGTGAAGCTTCTGGATACCGACTCTGTTCTTAGGGATTCGAGCACTCC
TGCACTGTCCAACAACATTCTCAGCGATGAAGTTGAAAGCTCTCGTACGAGTGTCGCCTC
AGAAAAGTCTGGTCATGAGTTGCTTAGCAGTGATTCTGATGGACACAAGAACTCCGGGAT
GGCTTATGTGGGCTTCATTGTCGATGCTAATGTAACTTCATACTTAATGATGGGCTCACT
GTCTCCAGGTTTGAAGTCGCATGCTGTGACACTATACGAGGCAGGAAAGCTTGGCGATTC
TTGTATTGCTGATCTATGCAATGATCTTGCCAGTTTAGAGGGGAAACGGTTTGAAGGTGT
GCTGCAGGAATTCGCAAACCATGCTTTCAGCCTCCGATCCTTCCTCGAGTGCTTGCTGTC
TGGCGGAACTTCAACTGAAACAGCTGACCTGACTACTAGTGAAGCAAATAACCAGGAGAG
CTCTGTCCAGGACGGTTTAGACACCACTTGTGCTAAGGAAAACAAGGGAAACGACGGTGT
CGATAATGCTGCTGAGAACTCGACTCAAATTTCAGAATCCTCTGATGGTGGCCAACTATC
ACTGCAGGACAACAAGATGGGTGATTCTGATGCTGCAGATGCGAATAGATCATCAGCATC
TTCGACGATCGTGTCTGAAGGCAAGGAAAGCATACTCAAACACGACTGTGACAGCGTCCA
GGCTCCAAAGCTGGGTGCTTCAGCTGCTAACGGTCCATCGTCCAAGAGCAAAAGAAGTTA
CCGAGTCAACATTCTTCGCTGCGAGAGCTTAGCTTCTCTGGCCCCATCGACGCTAGAGAG
ACTCCTTGCTAGGGACTACGACATCGTAGTGTCCATGATCCCTCTCCCATCTTCCTCAGT
CCTGCCCTGCCCATCTGGTCTAGTGCATTTTGGTCCGCCTTCCTACTCTTCCATGACACC
TTGGATGAAACTGGCGCTGTACACATCAGGGACCTGTGGCCCGGTATCTGCCGTTTTCAT
GAAGGGGCAGCGGCTGAGGTTGCTGCCTGAACCATTGGCCAGCTGCGAGAAGGCGCTGAT
ATGGTCCTGGGATCAGTCTGTGGTGGGCGGACTAGGCGGCAAGTTCGAAGGGAACTTGGT
GAAAGGAAGCCTTCTTCTGCACTACCTGAACTCGATGACAAAGCATTCTGCTGTGGTGGT
GCAGCCATTAAGCGAACACGATCTTGACGAGACAGGGAGCATCGTCACCATAGACGTCCC
GCTGCCGCTGAAAAATGCCGATGGGTCGATTCCATCCACGGTAGTCGGCACCGACTTGCC
GGAGGACCAGGTCTCGAGTCTGATCCTCTTGTTAGAGGACCTGTCCAATAGAGTCGAGCT
GAGCACGGTTGGGTACCTTCGGTTGCTAAGGCTTCACAGGGCGAATGAGTCGTCCGAGCA
CGGAAGCTTTGAGTGGGTGCCTCTGACCATAGAGTTCGGCATCCCTTTGTTTAGCCCACA
GCTCTGCGAGAGGATCTGCGAGAGGGTCGTCGAGTCACAGATGCTTCAGAAAGACGACAT
CGCTGAGCACTACGAGACGATGCAGAACGTGAGGAGGAGGCTGAGAGAGCTGTGCACCGA
GTACCAAGCGACCGGCCCAACGGCGAGGCTGTTCAATCAGCGGGGAGGCTCCAAGAACAA
CTCCCCGCGCAAACTGGTGCAGATTGTCAGCGGCAGATGGAGCCCGTTCCATGATCCGTC
TACGCCCACTCACTCCAGTAGCCCCCCCGCTGAACACGAAAGAGCCAAACCAGCGAGACG
GCAGAGATGCTTCACCGAAGTTCTGAGCTTTGATGGGAGGATCCTCAGGTCATATGCGCT
CACTCCTGTGTATGAGGCTGCTACAAGATCGGTCTCCGAAGAGCAGCCTACCACGCCCGC
AGCGAAACCGGATCACGAGGACGCCAACACCAAGGACGTGGCCTTGCCAGGAGTCAATCT
GATATTCGATGGAACTGAGTTGCACCCGTTTGACATCGTTGCCTGCCTCCAAGCTCGCCA
GCCTCTCTCGTTGATCGCCGAGGCGTCGGCCACATCTTTGGCAATGAAATGACGACGAGC
TGTCCAGTACGTACTAGTAAATTTTTCGGTAGGTGACGGAGTTTAGTAGTGTATGCCATT
GCATTCCTTCTTGCTGCTGTATGCAGAATTGCATTCTTCAAGGGGGAGCTTCTCAAAGCA
GGCATTTTTCTTTAAAAAAGAAGCTTGCTG