Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d038211_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:6:151749600:151753116:1 gene:Zm00001d038211 gene_biotype:protein_coding transcript_biotype:protein_coding description:Anther-specific proline-rich protein APG

Sequence

ATGGCGGCCGCCGTGGCCCTCCTCCTGCTCTCCGCCCTCGGCGGAGCGGCGGCGCAGGTG
TTCCCTCCGTGGAACGGCACGTTCCCGATGGGGCCCGGGTTCGGAGGCGGGAGCAGCAGC
GGCGGCGCGGCCGCGGGCGCGGGCGCGGGGACGGGCGTGCCGGCGATGTTCGTGTTCGGG
GACTCGCTGACGGACAACGGCAACAACAACGACCTGAACTCGCTCGCCAAGGCTAACTAC
CCGCCCTACGGCATCGACTTCGCCGGCGGCCCCACCGGCCGCTTCTCCAACGGCTACACC
ATGGTCGACGAGATCGCTCAGCTGCTGGGCCTGCCGCTGCTGCCGTCGCACACGGACGCG
GCGTCGAGCGGCGGCGGCGACGCGGCGCTGCACGGCGTGAACTACGCGTCGGCGGCGGCG
GGGATCCTGGACAACACGGGGCAGAACTTCGTGGGGCGCATCCCGTTCAACCAGCAGATC
AAGAACTTCGAGCAGACGCTGGAGCAGCTGCGGCGCCGGACGACGACGACGAGGCCGGGC
GCGGGCGCGGGCGGGCTGGCGCGGAGCATCTTCTACGTGGGCATGGGCAGCAACGACTAC
CTCAACAACTACCTCATGCCCAACTACAACACCCGCAACGAGTACAACGGCGACCAGTAC
TCCACGCTGCTGGTGCGCCAGTACGCCAGGCAGCTCGACGCGCTCTACGGCCTGGGCGCC
CGCAGGTTCGTCATCGCCGGGGTGGGCTCCATGGCCTGCATCCCCAACATGCGCGCGCGG
AGCCCCGTCAACATGTGCTCGCCCGACGTCGACGACCTCATCATCCCTTTCAACACCAAG
GTCAAGGCCATGGTGACCAGCCTCAACGCCAACCGCCCGGACGCCAAGTTCATCTACGTC
GACAACTACGCCATGATCTCCCAGATCCTAAGCAACCCGTGGTCCTACGGGTTCAGCGTG
GCCGACCGCGGCTGCTGCGGCATCGGGAGGAACCGGGGCATGATCACCTGCCTGCCCTTC
CTGCGCCCGTGCCTCAACCGCAACTCCTACATCTTCTGGGACGCCTTCCACCCGACGGAG
AGGGTCAACGTGCTCCTCGGCAGGGCCGCCTTCAGTGGCGGCAACGACGTCGTCTACCCC
ATGAACATCCAGCAGCTCGCCGCATGGCAGCCGTGA

Peptide Sequence

PEP ID

Zm00001d038211_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:6:151749600:151753116:1 gene:Zm00001d038211 transcript:Zm00001d038211_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Anther-specific proline-rich protein APG

Sequence

MAAAVALLLLSALGGAAAQVFPPWNGTFPMGPGFGGGSSSGGAAAGAGAGTGVPAMFVFG
DSLTDNGNNNDLNSLAKANYPPYGIDFAGGPTGRFSNGYTMVDEIAQLLGLPLLPSHTDA
ASSGGGDAALHGVNYASAAAGILDNTGQNFVGRIPFNQQIKNFEQTLEQLRRRTTTTRPG
AGAGGLARSIFYVGMGSNDYLNNYLMPNYNTRNEYNGDQYSTLLVRQYARQLDALYGLGA
RRFVIAGVGSMACIPNMRARSPVNMCSPDVDDLIIPFNTKVKAMVTSLNANRPDAKFIYV
DNYAMISQILSNPWSYGFSVADRGCCGIGRNRGMITCLPFLRPCLNRNSYIFWDAFHPTE
RVNVLLGRAAFSGGNDVVYPMNIQQLAAWQP

Transcript Sequence

Transcript ID

Zm00001d038211_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:151749600:151753116:1 gene:Zm00001d038211 gene_biotype:protein_coding transcript_biotype:protein_coding description:Anther-specific proline-rich protein APG

Sequence

AGGAGCCCGGTGCCACATTTACTCACTCACTCCCCAATCCACCCACCAACCAACCCAGAA
CCTCTCTACATTCCTCTTCCTCCTCTATAGTCTATATACACACACCAAGAGCAGGCTGCA
GCAGGCTCACGCCGCAACCTAGCTAGCCTGCACGCACTCTCACTGACCACGACCAGCGCT
CAGCCTTCTGCTCCGGAAGCTAGCTCTCCGGCCAGCCACCCCACCCCGTCCACCCGACAA
TGGCGGCCGCCGTGGCCCTCCTCCTGCTCTCCGCCCTCGGCGGAGCGGCGGCGCAGGTGT
TCCCTCCGTGGAACGGCACGTTCCCGATGGGGCCCGGGTTCGGAGGCGGGAGCAGCAGCG
GCGGCGCGGCCGCGGGCGCGGGCGCGGGGACGGGCGTGCCGGCGATGTTCGTGTTCGGGG
ACTCGCTGACGGACAACGGCAACAACAACGACCTGAACTCGCTCGCCAAGGCTAACTACC
CGCCCTACGGCATCGACTTCGCCGGCGGCCCCACCGGCCGCTTCTCCAACGGCTACACCA
TGGTCGACGAGATCGCTCAGCTGCTGGGCCTGCCGCTGCTGCCGTCGCACACGGACGCGG
CGTCGAGCGGCGGCGGCGACGCGGCGCTGCACGGCGTGAACTACGCGTCGGCGGCGGCGG
GGATCCTGGACAACACGGGGCAGAACTTCGTGGGGCGCATCCCGTTCAACCAGCAGATCA
AGAACTTCGAGCAGACGCTGGAGCAGCTGCGGCGCCGGACGACGACGACGAGGCCGGGCG
CGGGCGCGGGCGGGCTGGCGCGGAGCATCTTCTACGTGGGCATGGGCAGCAACGACTACC
TCAACAACTACCTCATGCCCAACTACAACACCCGCAACGAGTACAACGGCGACCAGTACT
CCACGCTGCTGGTGCGCCAGTACGCCAGGCAGCTCGACGCGCTCTACGGCCTGGGCGCCC
GCAGGTTCGTCATCGCCGGGGTGGGCTCCATGGCCTGCATCCCCAACATGCGCGCGCGGA
GCCCCGTCAACATGTGCTCGCCCGACGTCGACGACCTCATCATCCCTTTCAACACCAAGG
TCAAGGCCATGGTGACCAGCCTCAACGCCAACCGCCCGGACGCCAAGTTCATCTACGTCG
ACAACTACGCCATGATCTCCCAGATCCTAAGCAACCCGTGGTCCTACGGGTTCAGCGTGG
CCGACCGCGGCTGCTGCGGCATCGGGAGGAACCGGGGCATGATCACCTGCCTGCCCTTCC
TGCGCCCGTGCCTCAACCGCAACTCCTACATCTTCTGGGACGCCTTCCACCCGACGGAGA
GGGTCAACGTGCTCCTCGGCAGGGCCGCCTTCAGTGGCGGCAACGACGTCGTCTACCCCA
TGAACATCCAGCAGCTCGCCGCATGGCAGCCGTGACTCAGTGCAAAGCTATCGATCGATC
GATGCGTCGTTTTGTAGCGCTACTTACTGCTATAGCGTGTGTGTGTGGTCATGAGTAGGA
GGGAGCTGAGCGGAGAGTTATGGTACGGTGTGTATCCGACCAGTCTCCTGTTGTTTGGGG
GGTCAACATCGTGTCTCTTTTGTTTTTGGTTCATCATATCAGTTAGTTATCTATCAGTGT
TTGTTCGCTTATTACCTGTACTGCATCACGGAGATAAGTGGAGTTCTATATTGGGTTTTT
TAAA