Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d038208_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:6:151703542:151710829:1 gene:Zm00001d038208 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Alfin-like-transcription factor 5 description:PHD finger protein ALFIN-LIKE 6
Sequence

ATGGACCCCGGCGCCGGTGCACACTACTCCGCCCGTACCGCGGAGGAAGTCTTCCGCGAT
TTCCGCGGCCGCCGCGCGGGCATGATCAAGGCCCTCACCAACGATGTGGAGAAGTTCTAC
CAGCTGTGCGACCCCGAAAAGGAAAACTTGTGCCTTTATGGCTACCCCAACGAAACATGG
GAAGTAACTTTGCCAGCAGAGGAAGTTCCTCCAGAGATCCCTGAACCAGCTTTGGGTATA
AACTTTGCTAGGGATGGCATGAACGAGAAGGATTGGTTGGCGTTAGTTGCTGTCCACAGC
GATGCCTGGTTACTAGCTGTTGCATTCTACTTTGCAGCCCGGTTTGGGTTTGACAAAGAG
GCCAGGCGGCGACTCTTCAACATGATAAATAACTTGCCCACAATATTTGAAGTAGCGACT
GGGGTTGCCAAGAAACAAAACAAGGAGAAGGAACCCAATAATACCAGCAAAAGCAACAAA
CCAAGTTCGAAAATGACAACAAGACCCGAGTCTCATTTGAAGGCGACAAAAGTGGCGCCC
CCTAAGGATGAAGATGATGAGAGCGGTGAAGAGTATGAAGAAGAGGAAGAGCGTGATAAC
ACCTTATGTGGATCCTGTGGAACAAATGACGGCAAGGACGAATTCTGGATCTGTTGTGAT
AGTTGCGAGCGGTGGTACCATGGGAAGTGTGTCAAGATCACGCCTGCACGAGCTGAGCAC
ATCAAGCACTACAAATGCCCAGATTGCAGCAACAAGAGGGCAAGAGCCTAG

Peptide Sequence

PEP ID

Zm00001d038208_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:6:151703542:151710829:1 gene:Zm00001d038208 transcript:Zm00001d038208_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Alfin-like-transcription factor 5 description:PHD finger protein ALFIN-LIKE 6
Sequence

MDPGAGAHYSARTAEEVFRDFRGRRAGMIKALTNDVEKFYQLCDPEKENLCLYGYPNETW
EVTLPAEEVPPEIPEPALGINFARDGMNEKDWLALVAVHSDAWLLAVAFYFAARFGFDKE
ARRRLFNMINNLPTIFEVATGVAKKQNKEKEPNNTSKSNKPSSKMTTRPESHLKATKVAP
PKDEDDESGEEYEEEEERDNTLCGSCGTNDGKDEFWICCDSCERWYHGKCVKITPARAEH
IKHYKCPDCSNKRARA

Transcript Sequence

Transcript ID

Zm00001d038208_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:151703542:151710829:1 gene:Zm00001d038208 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Alfin-like-transcription factor 5 description:PHD finger protein ALFIN-LIKE 6
Sequence

ACCCATTGCCATCTCTAAACCTCACCCCTCCCTAGTATGCGACCCTGTTTCCTGTCTCCT
ACCCTCTTGCGGTCTTGCCAGCGCCCCTTCCTCCCTTCGTCTCCGCCGCCGCGGACTCCT
CGCCGGAACCCTAAATGGACCCCGGCGCCGGTGCACACTACTCCGCCCGTACCGCGGAGG
AAGTCTTCCGCGATTTCCGCGGCCGCCGCGCGGGCATGATCAAGGCCCTCACCAACGATG
TGGAGAAGTTCTACCAGCTGTGCGACCCCGAAAAGGAAAACTTGTGCCTTTATGGCTACC
CCAACGAAACATGGGAAGTAACTTTGCCAGCAGAGGAAGTTCCTCCAGAGATCCCTGAAC
CAGCTTTGGGTATAAACTTTGCTAGGGATGGCATGAACGAGAAGGATTGGTTGGCGTTAG
TTGCTGTCCACAGCGATGCCTGGTTACTAGCTGTTGCATTCTACTTTGCAGCCCGGTTTG
GGTTTGACAAAGAGGCCAGGCGGCGACTCTTCAACATGATAAATAACTTGCCCACAATAT
TTGAAGTAGCGACTGGGGTTGCCAAGAAACAAAACAAGGAGAAGGAACCCAATAATACCA
GCAAAAGCAACAAACCAAGTTCGAAAATGACAACAAGACCCGAGTCTCATTTGAAGGCGA
CAAAAGTGGCGCCCCCTAAGGATGAAGATGATGAGAGCGGTGAAGAGTATGAAGAAGAGG
AAGAGCGTGATAACACCTTATGTGGATCCTGTGGAACAAATGACGGCAAGGACGAATTCT
GGATCTGTTGTGATAGTTGCGAGCGGTGGTACCATGGGAAGTGTGTCAAGATCACGCCTG
CACGAGCTGAGCACATCAAGCACTACAAATGCCCAGATTGCAGCAACAAGAGGGCAAGAG
CCTAGCACCAAGCCCTGCTGTGACTCTGGAGTGAAGTAAGCGCCAAATCATTGATGTCTG
CAGATATATGCCTAGCTGTCTAGCTTGTAGACTTGCTTTCCATTTGGAATGAACGCTGTT
GATTCACTCGGTTGCCCTCAGCAGCTCATGTTGCTCAGGCTTAATTGTGTTTAATGTTTT
ACTAGCGAAACAAAATGTGCCAGTGTGTTGCATCGGAGCGTATATTTTATTATCCGGTAA
TCGTAC