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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d038193_T007
CDS Infomation

cds chromosome:B73_RefGen_v4:6:151176440:151181762:1 gene:Zm00001d038193 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:isopentenyl pyrophosphate isomerase3 description: isopentenyl pyrophosphate isomerase3
Sequence

ATGGCGTCATCGGCGGCGCGATCCCTCGCGCTCGTCGCGTCTGCCTCGGCATCGCTCGGC
GTCGGGCAGCGGTCGTGGGCTCGCTTGGCTGTCTCTTCCTCTTCGGCTGGGTCGGCCCTC
CCCAAGCTCCGCGGGCTCCGCTCGTTCGCCGCCTCCGCAGGGGGCGCCGTGATGGGGAAG
CCAGGCCCCGGGGTCGTTGACGCCGACGCCGGGATGGACGCCGTCCAGCGGCGGCTCATG
TTTGAGGACGAGTGCATTTTAGTGGATGAACAAGACAATGTCATCGGCCACGAGTCCAAG
TATAACTGCCATCTCATGGAGAAGATAGAAGCTGGAAATGCCCTGCACAGAGCTTTCAGT
GTTTTCCTTTTCAACTCCAAATATGAGTTGCTACTGCAGGTATTCACACAATACTAA

Peptide Sequence

PEP ID

Zm00001d038193_P007
PEP Infomation

pep chromosome:B73_RefGen_v4:6:151176440:151181762:1 gene:Zm00001d038193 transcript:Zm00001d038193_T007 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:isopentenyl pyrophosphate isomerase3 description: isopentenyl pyrophosphate isomerase3
Sequence

MASSAARSLALVASASASLGVGQRSWARLAVSSSSAGSALPKLRGLRSFAASAGGAVMGK
PGPGVVDADAGMDAVQRRLMFEDECILVDEQDNVIGHESKYNCHLMEKIEAGNALHRAFS
VFLFNSKYELLLQVFTQY

Transcript Sequence

Transcript ID

Zm00001d038193_T007
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:151176440:151181762:1 gene:Zm00001d038193 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:isopentenyl pyrophosphate isomerase3 description: isopentenyl pyrophosphate isomerase3
Sequence

GTCGGTCGCACCGAACAGCACGACCAGACCAGTTGCCCGGCTCACCAAATCCAGGCGTGG
CCGTGCGACCATCCCTCCCCTCATGGCGTCATCGGCGGCGCGATCCCTCGCGCTCGTCGC
GTCTGCCTCGGCATCGCTCGGCGTCGGGCAGCGGTCGTGGGCTCGCTTGGCTGTCTCTTC
CTCTTCGGCTGGGTCGGCCCTCCCCAAGCTCCGCGGGCTCCGCTCGTTCGCCGCCTCCGC
AGGGGGCGCCGTGATGGGGAAGCCAGGCCCCGGGGTCGTTGACGCCGACGCCGGGATGGA
CGCCGTCCAGCGGCGGCTCATGTTTGAGGACGAGTGCATTTTAGTGGATGAACAAGACAA
TGTCATCGGCCACGAGTCCAAGTATAACTGCCATCTCATGGAGAAGATAGAAGCTGGAAA
TGCCCTGCACAGAGCTTTCAGTGTTTTCCTTTTCAACTCCAAATATGAGTTGCTACTGCA
GGTATTCACACAATACTAACTATGGTTGTCTTGCTTTGAGATGTAATGTAAGTTCCACTT
CATGTTCCTTGAATCATTGGCTGCAGTTCTGAGTTCACTTTGTTCGTTTTCCAATTAAGT
AGGATATACAACCTTTTTGCTATTTTGCTTGGAGTAGGCTCTGTGTGTGATTTACAAAAA
AAAAAAGATTCGCTGTGTATTCAAAATGGGTTAGCTACTTAACGTAGTTCATGATTTCGG
GTTGGGATGCCTCATAAATCAATCCATCTCAATGGTGGTGGCAGAGGTGCTTGTCTTAGA
TGGGTCATGATCAAACTAGAGTTTGGGTGTCTTGGCACATATGAGCGTGATGTTTGGCAT
GTGCATTTATTCAAGCATGATATTATGGATAGGTTCAATTGAAAATTGCGAAAGGGTCTC
TAGTTGAGTTGGTTAGGTGGCTTGAGTAGCACTCCTCACGTTCTTTGTTTGACCTCTCAC
GGGAGCGAATTTCAGGTTGGGTTTAGAAAAATCCCATACCCTGTTCCATGGCAAAGCTCA
TGTTTAAGGTTCGATCGGGTTGTTCTCACATGGGCTACGGTGCCACTGTGTATGGGTAGT
ACAGGGGTTATCTCAATCTGTTTGAGAAGGCCTTCTTAACGCAATGGCTGGAAGCTGTCT
TGCCCCCACCTCTCCTCCCACAGGTTAATTTTTTAGGTTTGACTGAAAATTAGAAATAAC
TTTAGTTTGTGTTCTGATAGTTCTATTTTGACTGAACCCCGGATTTGGTTGCTCCATGCT
TTAGGTGGTGACAGGTTTTTCTTTGCCTGAGCCAATTTTCTGTTCCCTAAATGGATGATC
TCGTTCCTGACATAGAATGGTCATATTGAAGCAATCCTCTCGAAATTCTCATTTTATTTT
TCTTGAATGCTTCTTGGCTTCTTTCCATATTGAGGAATTGTGCGTTATGGAGCAATCTTC
ATAAAAATGTTTCCTTTCTTGGACATGGTTATTAGGTAGGTTAATATCAGGGTGTAGTTT
ACAACGATAACACTACTGAATAAAAAAACTCGACCCACGGGGGTAAGACAACCCCTAGGC
ATTTTATTAAGAAGACCTTCTCACGCAGGTCGAGAAAACCCCTGAACCCCGCTCCACCCA
TACACAGAGGCACCGTAGCCCATGTGAGAAACGACCGCGACCGGGACAGAGCCTTAGACC
TGTGCTTTGGCGTGGGACAGGCGAGGTTTTTTTAACCACAGTCTAAAGTTCGCTCCCACG
GGAAGTTGAACCCAGGACCCGAGGAGTGCTACTGAGACCAGTTAACCAACTTAACTAGAG
GCCCTTTCGTGATAACACTACTAAATCACTTTTACTTTCATGTAATGCCTCACCTAACAT
GGAAGAGCATGGATCTCTCTGGAAAATTGTTTATACTTGTACTAAAGAAAATATTTGTAA
CATTTTAGGAAGGAAAATGATTAGCCATTTTGGAATTAAGGTCCTTATTAAGAGGGCGCA
ATTTCAATTTTACCACATAAATTTGGCTGAGTAGAACATATCTTGCTTTCGCTCAAGAGC
TGTTAGCGAGTTTCTGCTGGTGAAATAGTTACTGTCCAATACCAGACCACTGGCTTTTAG
GATTTTGTTCATGAATCTTACATGTCTTTCTGCTCTGTACGAGAAATTTACTTTATGTTC
AGTTATGTCTCATCATATATGTAAACACTAAACAGTTTCACACACTCCAAAGCAGAAGCT
CAGAACAGTGGACATGAGTCATTTGTTGCTGGTTCTTCTGCCTTTGTTTTATGTTACTGC
ATTGCTATTTCTCTAAACTAGCTTGTCTAAATCAAAGGGTATTTCCTAAGTCTGTTTACC
GCAGAAGATATTGTAAAATCATATCCTTTACAGCAAAGGTCTGCAACAAAAGTGACATTT
CCACTTGTCTGGACAAACACCTGCTGTAGCCATCCTCTCTACCGCGAGTCAGAGTTGATT
GAGGAAAATTGTGCAGGGGTGAGAAATGCAGCCCAGCGCAAACTATTTGATGAGCTGGGA
ATAGTGGCTGACGAATTACCTGTCGACCAGTTCATTCCGCTTGGGAGGATGCTTTACAAG
GCTCCTTCAGATGGAAAATGGGGCGAACACGAGTTGGATTACCTCTTGTTCATGGTTCGT
GACGTGAAGCTCGACCCGAATCCTGAAGAGGTGGCCGATGTCAAGTACATGAACCGGCAT
CAGCTGAAGGAGCTGCTCAGGAAAGCCGATGCCGGGGAAGATGGCGTTAAGCTCTCCCCT
TGGTTCAGGCTGGTGGTGGACAACTTTCTCATGGGCTGGTGGGATCATGTCGAGCAAGGG
ACTCTGCAGGGGGCAGCAGACATGAAAACCATCCATAAATTGTAAATCTTCTAGATCGCT
TAAGCACGAGTCTTGCCCTGTTGAGGAATAAGCGCTTGTCCTGCTGTTTGGTGCTGGAGG
AATAATCGATAAAATTATAACAGAGTGAT