Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d038173_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:6:150515383:150517707:1 gene:Zm00001d038173 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cystatin5 description:Putative cystatin

Sequence

ATGATGCCTCGCCGCGCCCTTCTCTTCGCCGCGGTGCTCCTCGCGGCCTCCGCCGCCGCG
GTCTCCGGGTTCCACCTGGGAGGGGACGAGAGCGGTCTCGTGAGGGGTGTGCTCGCCGCG
CTCCGCGAGCGAGCCGAGGCCGAGGACGCCGCTCGCTTCGCCGTCGCCCACTACAACAAG
AACCAGGGCGCCGCTTTGGAGTTTACTAGGGTGCTCAAATCCAAGCGGCAGGTGGTGACC
GGGACCCTGCATGACCTGATACTGGAGGCAGCTGATGCTGGAAAAAAGAGTGTGTACAGA
GCAAAGGTTTGGGTGAAGCCGTGGGAAGATTTCAAGTCTGTCGTTGAGTTTCGCCTTGTT
GGAGACTCTGAATCTGAACCCGAGCCTTCTGTTGCTTCTGATGTTAGCTCTGGGCAAGCA
ATTGCCAAACTCTCTCTTGAAGCAGATATTGTACAAGAAGAGGCTCGCCTGCACACCATT
GAGAATGATGGGCTTTCCGGCGATTTCACATCATCATCTTAG

Peptide Sequence

PEP ID

Zm00001d038173_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:6:150515383:150517707:1 gene:Zm00001d038173 transcript:Zm00001d038173_T004 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cystatin5 description:Putative cystatin

Sequence

MMPRRALLFAAVLLAASAAAVSGFHLGGDESGLVRGVLAALRERAEAEDAARFAVAHYNK
NQGAALEFTRVLKSKRQVVTGTLHDLILEAADAGKKSVYRAKVWVKPWEDFKSVVEFRLV
GDSESEPEPSVASDVSSGQAIAKLSLEADIVQEEARLHTIENDGLSGDFTSSS

Transcript Sequence

Transcript ID

Zm00001d038173_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:150515383:150517707:1 gene:Zm00001d038173 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cystatin5 description:Putative cystatin

Sequence

CACACGCCGACGCGAACCAACCAACCAGCTGGTAGTAGGTTCGCCGCGCTGACGATGATG
CCTCGCCGCGCCCTTCTCTTCGCCGCGGTGCTCCTCGCGGCCTCCGCCGCCGCGGTCTCC
GGGTTCCACCTGGGAGGGGACGAGAGCGGTCTCGTGAGGGGTGTGCTCGCCGCGCTCCGC
GAGCGAGCCGAGGCCGAGGACGCCGCTCGCTTCGCCGTCGCCCACTACAACAAGAACCAG
GGCGCCGCTTTGGAGTTTACTAGGGTGCTCAAATCCAAGCGGCAGGTGGTGACCGGGACC
CTGCATGACCTGATACTGGAGGCAGCTGATGCTGGAAAAAAGAGTGTGTACAGAGCAAAG
GTTTGGGTGAAGCCGTGGGAAGATTTCAAGTCTGTCGTTGAGTTTCGCCTTGTTGGAGAC
TCTGAATCTGAACCCGAGCCTTCTGTTGCTTCTGATGTTAGCTCTGGGCAAGCAATTGCC
AAACTCTCTCTTGAAGCAGATATTGTACAAGAAGAGGCTCGCCTGCACACCATTGAGAAT
GATGGGCTTTCCGGCGATTTCACATCATCATCTTAGACATACTTGGTGTGACTAGGATTC
CAGGCAAGGATGGAAAGCGTAAAGGTTTAAAATGAAGATTTAGGTATTTAGAGTATGTCA
AGCTGAAATGCTTTGCCTTGTTTATTGGAATATGTATGTTTCGTTTCAAACGTGGGAGCA
TAGAACTGTATATTTCGGTATTTCACACTGTTCATTTCCATGTCTGTATATAAGGAGGTT
CTTCTGGCTATATATATATTTTGATCCTCAAGTACTTTTTCT