Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d038170_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:6:150418260:150422304:-1 gene:Zm00001d038170 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:deoxy xylulose synthase 1 description: deoxy xylulose synthase 1
Sequence	ATGGCTCTGTCGACGTTCTCTGTCCCAAGGGGATTCCTCGGTGTGCCGGCTCAGGACTCC CATTTCGCTTCGGCGGTCGAGCTCCATGTCAACAAGCTGCTCCAGGCCAGGCCTATCAAT CTCAAGCCTCGGCGGAGGCCGGCATGCGTGTCGGCGTCGCTGTCGTCGGAGCGCGAGGCG GAGTACTACTCGCAGAGGCCGCCCACGCCGCTGCTGGACACCATCAACTACCCCGTCCAC ATGAAGAACCTGTCTGTGAAGGAGCTGCGGCAGCTGGCCGACGAGCTCCGGTCCGACGTC ATCTTCCACGTCTCCAAGAACAACGTGGTCGCGGTGATCGGCGACGGCGCCATGACGGCC GGGCAGGCGTACGAGGCCATGAACAACGCCGGGTACCTGGACTCCGACATGATCGTCATC CTCAACGACAACAAGCAGGTGTCCTTGCCCACGGCGACGCTCGACGGGCCGGTGCCGCCC GTGGGCGCGCTCAGCAGCGCCCTCAGCAAGCTGCAGTCAAGCAGGCCGCTCAGGGAGCTC AGGGAGGTGGCCAAGGGAGTGACGAAGCAGATCGGTGGCTCAGTGCACGAGCTGGCGGCG AAGGTGGACGAGTACGCCCGCGGCATGATCAGCGGGCCCGGCTCCTCGCTCTTCGAGGAG CTCGGTCTCTACTACATCGGCCCCGTCGACGGCCACAACATCGACGACCTCATCACCATC CTCAACGACGTCAAGAGCACCAAGACCACCGGCCCCGTCCTCATCCACGTCGTCACCGAG AAGGGCCGCGGCTACCCCTACGCCGAGCGAGCCGCCGACAAGTACCACGGTGTCGCCAAG TTTGATCCGGCGACCGGGAAGCAGTTCAAGTCCCCCGCCAAGACGCTGTCCTACACCAAC TACTTCGCCGAGGCGCTCATCGCCGAGGCGGAGCAGGACAGCAAGATCGTGGCCATCCAC GCGGCCATGGGCGGCGGCACGGGGCTCAACTACTTCCTCCGCCGCTTCCCGAGCCGGTGC TTCGACGTCGGGATCGCGGAGCAGCACGCCGTCACGTTCGCGGCCGGCCTGGCCTGCGAG GGCCTCAAGCCCTTCTGCGCCATCTACTCGTCTTTCCTGCAGCGCGGCTACGACCAGGTC GTGCACGACGTCGATCTGCAGAAGCTACCGGTGCGGTTCGCCATGGACAGGGCCGGGCTG GTCGGCGCGGACGGGCCGACCCACTGCGGTGCGTTCGACGTCGCGTACATGGCCTGCCTG CCCAACATGGTCGTCATGGCCCCGTCCGACGAGGCCGAGCTCTGCCACATGGTCGCCACC GCCGCGGCCATCGACGACCGCCCGTCCTGCTTCCGCTACCCGAGAGGCAACGGCGTTGGC GTCCCGTTGCCGCCCAACTACAAAGGCACTCCCCTCGAGGTCGGCAAAGGCAGGATCCTG CTTGAGGGCGACCGGGTGGCGCTGCTGGGGTACGGGTCGGCAGTGCAGTACTGCCTGACT GCCGCGTCCCTGGTGCAGCGCCACGGCCTCAAGGTCACCGTCGCCGACGCGAGGTTCTGC AAGCCGCTGGACCACGCCCTGATCAGGAGCCTGGCCAAGTCCCACGAGGTGCTCATCACC GTGGAGGAAGGCTCCATCGGCGGGTTCGGCTCGCACGTCGCCCAGTTCATGGCCCTGGAC GGCCTTCTCGACGGCAAACTCAAGTGGCGACCGCTGGTGCTTCCTGACAGGTACATCGAC CATGGATCGCCGGCCGATCAGCTGGCCGAGGCTGGGCTGACGCCGTCACACATCGCCGCG TCGGTGTTCAACATCCTGGGGCAGAACAGGGAGGCTCTTGCCATCATGGCAGTGCCAAAC GCGTAG

Peptide Sequence

PEP ID	Zm00001d038170_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:6:150418260:150422304:-1 gene:Zm00001d038170 transcript:Zm00001d038170_T004 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:deoxy xylulose synthase 1 description: deoxy xylulose synthase 1
Sequence	MALSTFSVPRGFLGVPAQDSHFASAVELHVNKLLQARPINLKPRRRPACVSASLSSEREA EYYSQRPPTPLLDTINYPVHMKNLSVKELRQLADELRSDVIFHVSKNNVVAVIGDGAMTA GQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPVPPVGALSSALSKLQSSRPLREL REVAKGVTKQIGGSVHELAAKVDEYARGMISGPGSSLFEELGLYYIGPVDGHNIDDLITI LNDVKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKSPAKTLSYTN YFAEALIAEAEQDSKIVAIHAAMGGGTGLNYFLRRFPSRCFDVGIAEQHAVTFAAGLACE GLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVAYMACL PNMVVMAPSDEAELCHMVATAAAIDDRPSCFRYPRGNGVGVPLPPNYKGTPLEVGKGRIL LEGDRVALLGYGSAVQYCLTAASLVQRHGLKVTVADARFCKPLDHALIRSLAKSHEVLIT VEEGSIGGFGSHVAQFMALDGLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSHIAA SVFNILGQNREALAIMAVPNA

Transcript Sequence

Transcript ID	Zm00001d038170_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:150418260:150422304:-1 gene:Zm00001d038170 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:deoxy xylulose synthase 1 description: deoxy xylulose synthase 1
Sequence	CTCCCCGGCCACTTCCCAAATCCGCCCGCCATTCATGCACCCTTCTGTGCACTGTCAGCG CCACCATTAGCTCGCAGCTCAAGCTCGCCACTACCATTTTGGTCGGTTCTTGAGGAAATC GATCGAACCGTTGGAGTGCCACCACTGGCAGAGGCTGTTGCATTCTTGAGTTGAGCAGGA AGAGGAGAGGAAGCAATGGCTCTGTCGACGTTCTCTGTCCCAAGGGGATTCCTCGGTGTG CCGGCTCAGGACTCCCATTTCGCTTCGGCGGTCGAGCTCCATGTCAACAAGCTGCTCCAG GCCAGGCCTATCAATCTCAAGCCTCGGCGGAGGCCGGCATGCGTGTCGGCGTCGCTGTCG TCGGAGCGCGAGGCGGAGTACTACTCGCAGAGGCCGCCCACGCCGCTGCTGGACACCATC AACTACCCCGTCCACATGAAGAACCTGTCTGTGAAGGAGCTGCGGCAGCTGGCCGACGAG CTCCGGTCCGACGTCATCTTCCACGTCTCCAAGAACAACGTGGTCGCGGTGATCGGCGAC GGCGCCATGACGGCCGGGCAGGCGTACGAGGCCATGAACAACGCCGGGTACCTGGACTCC GACATGATCGTCATCCTCAACGACAACAAGCAGGTGTCCTTGCCCACGGCGACGCTCGAC GGGCCGGTGCCGCCCGTGGGCGCGCTCAGCAGCGCCCTCAGCAAGCTGCAGTCAAGCAGG CCGCTCAGGGAGCTCAGGGAGGTGGCCAAGGGAGTGACGAAGCAGATCGGTGGCTCAGTG CACGAGCTGGCGGCGAAGGTGGACGAGTACGCCCGCGGCATGATCAGCGGGCCCGGCTCC TCGCTCTTCGAGGAGCTCGGTCTCTACTACATCGGCCCCGTCGACGGCCACAACATCGAC GACCTCATCACCATCCTCAACGACGTCAAGAGCACCAAGACCACCGGCCCCGTCCTCATC CACGTCGTCACCGAGAAGGGCCGCGGCTACCCCTACGCCGAGCGAGCCGCCGACAAGTAC CACGGTGTCGCCAAGTTTGATCCGGCGACCGGGAAGCAGTTCAAGTCCCCCGCCAAGACG CTGTCCTACACCAACTACTTCGCCGAGGCGCTCATCGCCGAGGCGGAGCAGGACAGCAAG ATCGTGGCCATCCACGCGGCCATGGGCGGCGGCACGGGGCTCAACTACTTCCTCCGCCGC TTCCCGAGCCGGTGCTTCGACGTCGGGATCGCGGAGCAGCACGCCGTCACGTTCGCGGCC GGCCTGGCCTGCGAGGGCCTCAAGCCCTTCTGCGCCATCTACTCGTCTTTCCTGCAGCGC GGCTACGACCAGGTCGTGCACGACGTCGATCTGCAGAAGCTACCGGTGCGGTTCGCCATG GACAGGGCCGGGCTGGTCGGCGCGGACGGGCCGACCCACTGCGGTGCGTTCGACGTCGCG TACATGGCCTGCCTGCCCAACATGGTCGTCATGGCCCCGTCCGACGAGGCCGAGCTCTGC CACATGGTCGCCACCGCCGCGGCCATCGACGACCGCCCGTCCTGCTTCCGCTACCCGAGA GGCAACGGCGTTGGCGTCCCGTTGCCGCCCAACTACAAAGGCACTCCCCTCGAGGTCGGC AAAGGCAGGATCCTGCTTGAGGGCGACCGGGTGGCGCTGCTGGGGTACGGGTCGGCAGTG CAGTACTGCCTGACTGCCGCGTCCCTGGTGCAGCGCCACGGCCTCAAGGTCACCGTCGCC GACGCGAGGTTCTGCAAGCCGCTGGACCACGCCCTGATCAGGAGCCTGGCCAAGTCCCAC GAGGTGCTCATCACCGTGGAGGAAGGCTCCATCGGCGGGTTCGGCTCGCACGTCGCCCAG TTCATGGCCCTGGACGGCCTTCTCGACGGCAAACTCAAGTGGCGACCGCTGGTGCTTCCT GACAGGTACATCGACCATGGATCGCCGGCCGATCAGCTGGCCGAGGCTGGGCTGACGCCG TCACACATCGCCGCGTCGGTGTTCAACATCCTGGGGCAGAACAGGGAGGCTCTTGCCATC ATGGCAGTGCCAAACGCGTAGAACTTGTGCTGATCTGGGCCTATAGAGATGATTGTACAT TTTGTCGTTAACTAGAGTGTCTGAACTTGG