Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d038167_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:6:150267525:150271745:-1 gene:Zm00001d038167 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipase

Sequence

ATGGCGCGGTTCATCCTTAGCCTGATGGAGCTCGGGGTCAGCGCCACCGTGCACATGCTC
TTCGGCCTCTACGTCTTCAGCACGGCCGTCGCCGCAGACATCTCGCAGGCGGCCGCGGCG
TCGGGGTGTCTCCTACTGCGCCGGCCACCCCCCGCGGCGGCGGGCTCGACCGGGGGAGCG
CTCGTCGACGTCGCCGCGGCGGGTGAGAGCGACGAGCTCAGGGGCGCCGCGCCCGTCATC
CTCGATGCATCGCCGCCGCCCATCGTCCTCGTCCACGGCATCTTCGGCTTCGGCAAAGGG
AGGCTCGGTGGCCTCTCCTACTTCGCCGGCGCCGAGAAGAAGGACGACCGCGTGCTCGTG
CCGGATTTGGGGTCGCTCACCAGCATCCATGACAGGGCGCGTGAGCTCTTCTACTACCTC
AAGGGTGGGCAGGTGGACTACGGCGAGGAGCACAGCAAGGCTTGCGGCCACAACAGGTTT
GGAAGAATATATCACACAGGGCACTATCCTGTGTGGGACGAGCACAACCCAGTGCATTTT
GTGGGGCACTCTGCTGGCGCGCAGGTTGTGAGGGTGCTGCATCAGATGCTTGCCGACAAG
GCTTTCCCTGGTCATGATACTTCTGAAGATTGGGTTGTAAGCCTGACTTCCTTGTCGGGT
GCACTTAATGGAACCACAAGAACTTACTACGATGGCATGCTGGTCGTAGATGGTAGGTCC
ATGAAATCTATCTGTCTTCTTCAGCTCTGCCGGCTCGGAGTTATTGTCTACGATTGGCTA
GACATTCCTTGGCTGAAGAATTACTACAATTTTGGTTTTGACCACTATGAGATGTCGTGG
AGGAAAGTAGGCTTTTCAGGTCTAATTAATCTACTGCTGGGGCACACGGGCCCATTTGCC
AGCGGGGATTGGATTCTACCTGACCTCACAATCCAAGGATCCATGAAACTAAACTCTACA
CTTAGGACCTTTCCCAATACATTCTACTTCAGCTATGCTACAAAGAAAACAAGAAAAATA
TTTGGAATTACAGTTCCTTCAAGTGTTCTTGGAGTGCACCCCATTCTCTTTCTGAGAGTC
CTCCAGATGTGTATGTGGCGGCACCCTCAAAATGCACCTCTGCCTTACAAAGGATACAGG
TGA

Peptide Sequence

PEP ID

Zm00001d038167_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:6:150267525:150271745:-1 gene:Zm00001d038167 transcript:Zm00001d038167_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipase

Sequence

MARFILSLMELGVSATVHMLFGLYVFSTAVAADISQAAAASGCLLLRRPPPAAAGSTGGA
LVDVAAAGESDELRGAAPVILDASPPPIVLVHGIFGFGKGRLGGLSYFAGAEKKDDRVLV
PDLGSLTSIHDRARELFYYLKGGQVDYGEEHSKACGHNRFGRIYHTGHYPVWDEHNPVHF
VGHSAGAQVVRVLHQMLADKAFPGHDTSEDWVVSLTSLSGALNGTTRTYYDGMLVVDGRS
MKSICLLQLCRLGVIVYDWLDIPWLKNYYNFGFDHYEMSWRKVGFSGLINLLLGHTGPFA
SGDWILPDLTIQGSMKLNSTLRTFPNTFYFSYATKKTRKIFGITVPSSVLGVHPILFLRV
LQMCMWRHPQNAPLPYKGYR

Transcript Sequence

Transcript ID

Zm00001d038167_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:150267525:150271745:-1 gene:Zm00001d038167 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipase

Sequence

CTCCGTCCCCACAACCAAACTGCGCGAGCGCGAAGGAGCACGGACAGCACAGCGGCACAG
CGCAGACGCGGCGGCGGCCCAATCCGGAGGGCGCGACCGTTCCTTTTTCTGTCCGTCCCT
TCCTCCCTCCCTTCGTTCGTTGGCCTCCTCCTCCTGTTCCTCTTCTTGGCGCGGCAAGAG
GAGGAATAGCAGGAGAGGGGCGCCCCGATCCATAGGGCAACGACCAACGGCACGCCGCCG
CCGCCGCTGCCACGACAAGATGGCGCGGTTCATCCTTAGCCTGATGGAGCTCGGGGTCAG
CGCCACCGTGCACATGCTCTTCGGCCTCTACGTCTTCAGCACGGCCGTCGCCGCAGACAT
CTCGCAGGCGGCCGCGGCGTCGGGGTGTCTCCTACTGCGCCGGCCACCCCCCGCGGCGGC
GGGCTCGACCGGGGGAGCGCTCGTCGACGTCGCCGCGGCGGGTGAGAGCGACGAGCTCAG
GGGCGCCGCGCCCGTCATCCTCGATGCATCGCCGCCGCCCATCGTCCTCGTCCACGGCAT
CTTCGGCTTCGGCAAAGGGAGGCTCGGTGGCCTCTCCTACTTCGCCGGCGCCGAGAAGAA
GGACGACCGCGTGCTCGTGCCGGATTTGGGGTCGCTCACCAGCATCCATGACAGGGCGCG
TGAGCTCTTCTACTACCTCAAGGGTGGGCAGGTGGACTACGGCGAGGAGCACAGCAAGGC
TTGCGGCCACAACAGGTTTGGAAGAATATATCACACAGGGCACTATCCTGTGTGGGACGA
GCACAACCCAGTGCATTTTGTGGGGCACTCTGCTGGCGCGCAGGTTGTGAGGGTGCTGCA
TCAGATGCTTGCCGACAAGGCTTTCCCTGGTCATGATACTTCTGAAGATTGGGTTGTAAG
CCTGACTTCCTTGTCGGGTGCACTTAATGGAACCACAAGAACTTACTACGATGGCATGCT
GGTCGTAGATGGTAGGTCCATGAAATCTATCTGTCTTCTTCAGCTCTGCCGGCTCGGAGT
TATTGTCTACGATTGGCTAGACATTCCTTGGCTGAAGAATTACTACAATTTTGGTTTTGA
CCACTATGAGATGTCGTGGAGGAAAGTAGGCTTTTCAGGTCTAATTAATCTACTGCTGGG
GCACACGGGCCCATTTGCCAGCGGGGATTGGATTCTACCTGACCTCACAATCCAAGGATC
CATGAAACTAAACTCTACACTTAGGACCTTTCCCAATACATTCTACTTCAGCTATGCTAC
AAAGAAAACAAGAAAAATATTTGGAATTACAGTTCCTTCAAGTGTTCTTGGAGTGCACCC
CATTCTCTTTCTGAGAGTCCTCCAGATGTGTATGTGGCGGCACCCTCAAAATGCACCTCT
GCCTTACAAAGGATACAGGTGAATCCTCTGCTCTAAGACAAAATACATCTCTTGAAAAGT
ACCTTCACTTGTTTGGCATGGCTTTAATTTTGTTGCCTATATTGTGCTGGTGCAGGGATG
AAGATTGGGAAGACAACGATGGGGCTTTGAACACAATCTCTATGACACACCCCCGCATTC
CCATCGAGCATCCACACCATTTTGTAGTCGATGATTCTGACTGCCATCCTTTGCAACCTG
GGATATGGTATTACAAGATTATTGAAGCTGACCACATTCTATTCATTGTGAACCGGGAAA
GAGCTGGAGTGCAGTTTGATTTGCTGTACGATGGCATTTTTCAGCGCTGCAGGAAACATG
CCTTTAGGAAGAGCCCACCTACTGTACCAAACGAAACGAGCCGATAGCAAAACTAAGCTG
AAGTATGTGTAGGTAGTACATAGGAAGAAACAAGGTGCCACGACATTTTCATTAACTGTA
AATTACATTGTTGATTGAACGGCAATAACATATTTGCTTCTCCAATTTTCGGAATGGGGT
TCATGGAGACTGGGAACTTGCATGCTTTCTTGTCATAATACTCCGACTGCCAATTTAATG
CTTCGCCCTACAGTCTAATGCAAAAAAAAGGTATGGATGGATGGTTGTACGGACAGGCTG
AATAATGCAAAAAGTGATATGGATGGAGGGTTGTACCGTACGGATGGTGTAACATTGTAC
TAGTAAGGGTTTAGTGAGAAGGCACACAGATGACATTATTTCAAGTGGACTATTGATAAT
CTTCTT