Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d038166_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:6:150257720:150262988:-1 gene:Zm00001d038166 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGAGCGGATCCCTCCCTAGCCTAAACCCCTCGCGCCGCCGCCGGCCTACGCCGCCGCAG CCTCCTCCCATGTCCCGCCGCCCCGCCTGTTCCCTCCTCCCTCTGCTCCGAAGCCGCCGC TGCCTTTACGACGCCACCACCGCTAGGCCCTTCACCTCCGTCTCTGTCCCACCCGACGTG ATCTCCTCCACCTGGCCGCCGCACTCCCCGTCGCCTCTTCATCCTCCGCCCGATCCGGCC GGGACGTGGTGCTCAGCCTCTTGTTCTTCTACCTCGCCGGCGCTCCCGCCCTTTACCGCA TCCCATCTCCGAGCCGCCGTCTCCTTGCTCGCCACCTCGCTCACCGCGCTCCCGGGGCCT GACCCGGACCCGGTGTCCGCCCTCCACGACCACTCCTTCCCTACCCTCCTCGCCGTCTCG CCGCTCGCGTCACTTGAGCTCCTCTCGCTGCTCCGGTCCAGGCCTCGGTTAGGGCTCGCT GTATTCTCATTCCGCCGTGTGCTCTCCCCGGTGCCCTCTATCAGTGAGTTTGCCCTCGCC ATCTCGCTCGCGGGCCGCGCCGGAGACCATGACGCGGCGGCCGCGCTCTTTGCCGACGGC ACCGCTATTCATTCCCCTAACCTAGGGCTTTACAACGCTCTTATGTCGGCATACATGCAC AGCGGCCTCCTTGACAACTGCATCGAGGTCTTCCACGCGCTGGAGCGCGATCCCAGGTGC GGTCCGCCTAACGTGGACTCGTACAACATCCTCATCGCCCTGTTCGGTCGCTCCATCCTC GTTGACCACATGGAGCGCACGCTCCAGTCGCTGGACGCTTCTGGCCAACCCCGCACTATT GGTACTTACAATGCAATCATCTCTGGTTACCTCACCGCATGGATGTGGGACAAAATGGAA GCGTCGTTTCAGGAGATGGTGTCGTTCCATGTTGCTCCAGATGCTACTACGCATAAGTTG ATGTTAAGAGGATATGCACATGCCGGGATGATCTGTAAAATGGAGCAAGCTTATGAGCGT GCTTGCAAGCTTGGCATAAAGGTTGACATTTTGCATATACGTGCAATGCTGTGCGCATAC TGCAAGTTTTACCATGTAGGTAGAATCCAAAAGATTGAGGATTTGCTCAAGAAGTTGGGT CCTGATGATTACAGGCCATGGCTAAATGTCCTCTTAATTAAGGTGTATGCTCAGGAGGGG TTGACCGAGGGGATGGAGCTGTATATTTCTGAGGCATTGGAACGCAATACCATTGTTACC GCAGTAAAGGTGATGCGGTCCATCATATGTAACTATTTTCAGTATGACGCGGTTGACAGA CTTGCACTTTTTGTCCGACGGGCCGAAGATGCTGGTTGGAAGCTGTGCCGGAGTTTGTAC CACTGCAAGATGGTGATGTATGGGAAGCACTATCGGTTGGAAGAGATGCATGGGGTGCTC GATGAGATGGAATGTTTGAAGTTTGATCGAACAAAGAAGACATTTTGGATCATGTACAAG GCATATGTTAGTTGTGGTAGGAGGACTGAAGCCAACACTATAATTGGCATGATGTGGAAG CATGGGTTTGCTGTTCGTGACGACATGTCTGATCAATAA

Peptide Sequence

PEP ID	Zm00001d038166_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:6:150257720:150262988:-1 gene:Zm00001d038166 transcript:Zm00001d038166_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	MSGSLPSLNPSRRRRPTPPQPPPMSRRPACSLLPLLRSRRCLYDATTARPFTSVSVPPDV ISSTWPPHSPSPLHPPPDPAGTWCSASCSSTSPALPPFTASHLRAAVSLLATSLTALPGP DPDPVSALHDHSFPTLLAVSPLASLELLSLLRSRPRLGLAVFSFRRVLSPVPSISEFALA ISLAGRAGDHDAAAALFADGTAIHSPNLGLYNALMSAYMHSGLLDNCIEVFHALERDPRC GPPNVDSYNILIALFGRSILVDHMERTLQSLDASGQPRTIGTYNAIISGYLTAWMWDKME ASFQEMVSFHVAPDATTHKLMLRGYAHAGMICKMEQAYERACKLGIKVDILHIRAMLCAY CKFYHVGRIQKIEDLLKKLGPDDYRPWLNVLLIKVYAQEGLTEGMELYISEALERNTIVT AVKVMRSIICNYFQYDAVDRLALFVRRAEDAGWKLCRSLYHCKMVMYGKHYRLEEMHGVL DEMECLKFDRTKKTFWIMYKAYVSCGRRTEANTIIGMMWKHGFAVRDDMSDQ

Transcript Sequence

Transcript ID	Zm00001d038166_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:150257720:150262988:-1 gene:Zm00001d038166 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ACGCGGATGAGCGGATCCCTCCCTAGCCTAAACCCCTCGCGCCGCCGCCGGCCTACGCCG CCGCAGCCTCCTCCCATGTCCCGCCGCCCCGCCTGTTCCCTCCTCCCTCTGCTCCGAAGC CGCCGCTGCCTTTACGACGCCACCACCGCTAGGCCCTTCACCTCCGTCTCTGTCCCACCC GACGTGATCTCCTCCACCTGGCCGCCGCACTCCCCGTCGCCTCTTCATCCTCCGCCCGAT CCGGCCGGGACGTGGTGCTCAGCCTCTTGTTCTTCTACCTCGCCGGCGCTCCCGCCCTTT ACCGCATCCCATCTCCGAGCCGCCGTCTCCTTGCTCGCCACCTCGCTCACCGCGCTCCCG GGGCCTGACCCGGACCCGGTGTCCGCCCTCCACGACCACTCCTTCCCTACCCTCCTCGCC GTCTCGCCGCTCGCGTCACTTGAGCTCCTCTCGCTGCTCCGGTCCAGGCCTCGGTTAGGG CTCGCTGTATTCTCATTCCGCCGTGTGCTCTCCCCGGTGCCCTCTATCAGTGAGTTTGCC CTCGCCATCTCGCTCGCGGGCCGCGCCGGAGACCATGACGCGGCGGCCGCGCTCTTTGCC GACGGCACCGCTATTCATTCCCCTAACCTAGGGCTTTACAACGCTCTTATGTCGGCATAC ATGCACAGCGGCCTCCTTGACAACTGCATCGAGGTCTTCCACGCGCTGGAGCGCGATCCC AGGTGCGGTCCGCCTAACGTGGACTCGTACAACATCCTCATCGCCCTGTTCGGTCGCTCC ATCCTCGTTGACCACATGGAGCGCACGCTCCAGTCGCTGGACGCTTCTGGCCAACCCCGC ACTATTGGTACTTACAATGCAATCATCTCTGGTTACCTCACCGCATGGATGTGGGACAAA ATGGAAGCGTCGTTTCAGGAGATGGTGTCGTTCCATGTTGCTCCAGATGCTACTACGCAT AAGTTGATGTTAAGAGGATATGCACATGCCGGGATGATCTGTAAAATGGAGCAAGCTTAT GAGCGTGCTTGCAAGCTTGGCATAAAGGTTGACATTTTGCATATACGTGCAATGCTGTGC GCATACTGCAAGTTTTACCATGTAGGTAGAATCCAAAAGATTGAGGATTTGCTCAAGAAG TTGGGTCCTGATGATTACAGGCCATGGCTAAATGTCCTCTTAATTAAGGTGTATGCTCAG GAGGGGTTGACCGAGGGGATGGAGCTGTATATTTCTGAGGCATTGGAACGCAATACCATT GTTACCGCAGTAAAGGTGATGCGGTCCATCATATGTAACTATTTTCAGTATGACGCGGTT GACAGACTTGCACTTTTTGTCCGACGGGCCGAAGATGCTGGTTGGAAGCTGTGCCGGAGT TTGTACCACTGCAAGATGGTGATGTATGGGAAGCACTATCGGTTGGAAGAGATGCATGGG GTGCTCGATGAGATGGAATGTTTGAAGTTTGATCGAACAAAGAAGACATTTTGGATCATG TACAAGGCATATGTTAGTTGTGGTAGGAGGACTGAAGCCAACACTATAATTGGCATGATG TGGAAGCATGGGTTTGCTGTTCGTGACGACATGTCTGATCAATAACTTCTCTAATTGAAG AATTATTGGAGATGCTGAGTTCATATGTTGTCGACTCCTTCCTGGGACAGCAGTACATGC GCCGCCATAGGTCCAGAGGTCGGTTGGAAGCGTCGCCATAGGTTCAGGAGTTGGTTAGAT CTAATTCTTTAATATTAGGATCAGATAGTTGAGTCCTGGAGTTAGTTGGTTCTGCTTCCT TATTATTAGCATCAGATAATCTTGTCAGTTAGTTGAGGGTAATCAGCCGCACCTGTGCTA TAAAGGTGAGTAGTTTGTATTAGGTTTTCTTTATCCAAGAAAAACAGTTTCCTGTTGTGG GAACTCCTTGGTCACTGTGGCTGATCGCGCAGCCTCCGACAGTGCCGGTGGAGTCCCAGT GACCAGCTGGAGTCCCTACCTCCTGAGATCTCTACCCCAGTCTAGTTCTCTCCTCTCCTC TCCCCTACGCAGCCCCAAGAGACCAGGCCGTATCATCATATCTTCTTTTTCCTAGGCTTC TGTACTGATGGTCACGACAATTATAAATACATTTCTGT