Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d038156_T025
CDS Infomation

cds chromosome:B73_RefGen_v4:6:149721812:149731441:-1 gene:Zm00001d038156 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:autophagy18g description:Autophagy-related protein 18g
Sequence

ATGAGGCGGGGGAAGGGGGCAAGGAATGGGTTGCTGCCGAGTTCGCTGCGGATCATATCG
TCCTGCCTCAAGACGGTGACCTCCAACGCCGGCTCCGTCGCGTCCAGCGTGCGCTCGGCC
GGCGCCTCCGTCGCCGCATCCATCTCCTCCCAGGCAGAGGACGAGAAGGATCAGGTTTTG
TGGGCTGGATTCGATAAACTAGAGCTTCATCCATCATCATTCAAGCATGTCCTGCTTGTT
GGTTATTCAAATGGGTTTCAAGTGCTTGATGTTGAGGATGCTGCAAATGTTTGTGAATTG
GTCTCAAAACATGATGGCCCAGTTACGTTTTTACAAATGCAACCCACTCCAGTCGGCTCT
GAAGGCATTGAAGGATTCAGAGCATCACATCCCATGCTTCTAGTTGTTGCTGGTGATGAG
ACAAACGGCCTGGGTGCGATTCAAGGTGGTCGCTTAAGTGCTCTTATCAGAGACACAAAC
AGTGAGCATCAAGCTGTAAATTGCATTTCAACCCCAACAGTTGTCCGTTTCTACTCTTTG
AAGTCTCACACCTATGTACATGTTCTTCGATTCCGGTCTGCTGTATATTTAGTTCGCTGC
AGTCCTAGGATTGTTGCTGTAGCACTTGCAGCACAAATCTACTGCTTTGACGCTGTTACT
CTTGAGAACAAGCTCAGCGTCTTGTCATATCCTTTGCAAGGTGCACCTGGGGTAAATATT
GGGTATGGCCCGATGGCTGTTGGCCCCAGATGGTTAGCCTATGCCACAAATACTCCTTTA
TTGTCAAACACAGGCCGCCTAAGTCCACAGAACCTCACACCTTCGCCAGGAGTGAGCCCA
TCTACTTCTCCCAGCAGTGGAAGTTTAGTTGCTAGATATGCAATGGAGTCTAGCAAGCAG
TTAGCTTCTGGTATTATTGACATGGGATATACATTTTCAAAGTACTGCCAGGAACTTCTG
CCAGATGGTTCTAACTCCCCTTTGTCATCGAGCCCAGGCAGGAGATCTGGTAAAATTCTT
TCCAGTGTGCATCCACTGGAAGCTGACAATGCAGGCATGGTAGTCATCAAGGATTTCACA
TCCAAAATTGTTGTCTCACAGTTTAAGGCTCACACAAGTCCGATATCTGCTCTTTGTTTT
GACCCTAGTGGAACACTTTTGGTGACAACCTCTGTTCATGGCCATAACATAAATGTTTTC
AGGATCATGCCAACCTGCATTGCTAATGGCTCAGGCGCAACACGTTATGATTGGACAGCT
TCTCATGTTCATCTCTATAAACTGTATCGTGGCATGACATCAGCTGTCATACAAGACATC
TCGTTTAGTCATTTTAGTCAATGGATATCTATTGTTTCATCTCGAGGTACCTGCCATATT
TTTACATTGTCCCCATTTGGTGGTGATGCCAGTCTGCAGCCACAGAATTCTCACAGTGAT
GGGCCCCCTCTTGCCCCATGTCAGTCAAGGCCATGGTGGTCAAAGCCATCCTTTCTTATG
GACCAACAGCTTCACCAAGTTCCCTCAACTGTGACACATTCGGTTGTCAGTAGGATAAAG
AATAACACTTCTGGTTGGCTAAATAATGTCAGCAATGTGGCTGCTTCTGCAAGTGGAAAA
CTATCTGTACCATCTGGCGCTGTAACTGCTGTTTTCCATAATTCCATCTACCAGGGTTCT
TTGCCAGTTCCATCTAAGGCTAATGCTTTAGAGCATCTACTGGTGTATTCGCCATCTGGT
CATGTCATTCAACATGAACTTTTACCTTCTTCAGGTTCTGAGTCCTCTGGTAGCAGCCCA
AGAGTTGGTTCAGGTCCTAACTTGCAACTACAAGATGATGAGATGCATGTTACTGCTGAA
CCAATTCAATGGTGGGATGTGTGCCGTAGGACAAACTGGCCAGAAAGAGATGAAAACATT
GCCAACATTGTATTGTATAACCAAAGAAGCAGTATGATGGCTATGGGTGCTTCTGACTGT
GAAGATAGCGAGCATTCGGATTCCACTGCATCAAATGATGGTATCTCTGGGAAAGAGATT
ATGAGAATCCGAGAAAGGTCAAGCTGGTATCTATCTAATGCAGAAGTACAGATAAACTCG
TGGCGGATTCCCATCTGGCAGAAATCTAAGATTTGCTTCTATGTGATGGGCTATCCTGCT
GCAGAGTTGGTCGAATCAGTTAGCAGTGGTGGTGGAGAAATTGAGATTGAGAAGTTACCT
CTTCACGAGGTTGAGATCAGGAGAAGGGAATTGCTCCCTGTATTCAAGCAGTTCCAATAT
TCTGATCGACATTCCAGTGATAGGGATTATGCAATGACGTAG

Peptide Sequence

PEP ID

Zm00001d038156_P025
PEP Infomation

pep chromosome:B73_RefGen_v4:6:149721812:149731441:-1 gene:Zm00001d038156 transcript:Zm00001d038156_T025 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:autophagy18g description:Autophagy-related protein 18g
Sequence

MRRGKGARNGLLPSSLRIISSCLKTVTSNAGSVASSVRSAGASVAASISSQAEDEKDQVL
WAGFDKLELHPSSFKHVLLVGYSNGFQVLDVEDAANVCELVSKHDGPVTFLQMQPTPVGS
EGIEGFRASHPMLLVVAGDETNGLGAIQGGRLSALIRDTNSEHQAVNCISTPTVVRFYSL
KSHTYVHVLRFRSAVYLVRCSPRIVAVALAAQIYCFDAVTLENKLSVLSYPLQGAPGVNI
GYGPMAVGPRWLAYATNTPLLSNTGRLSPQNLTPSPGVSPSTSPSSGSLVARYAMESSKQ
LASGIIDMGYTFSKYCQELLPDGSNSPLSSSPGRRSGKILSSVHPLEADNAGMVVIKDFT
SKIVVSQFKAHTSPISALCFDPSGTLLVTTSVHGHNINVFRIMPTCIANGSGATRYDWTA
SHVHLYKLYRGMTSAVIQDISFSHFSQWISIVSSRGTCHIFTLSPFGGDASLQPQNSHSD
GPPLAPCQSRPWWSKPSFLMDQQLHQVPSTVTHSVVSRIKNNTSGWLNNVSNVAASASGK
LSVPSGAVTAVFHNSIYQGSLPVPSKANALEHLLVYSPSGHVIQHELLPSSGSESSGSSP
RVGSGPNLQLQDDEMHVTAEPIQWWDVCRRTNWPERDENIANIVLYNQRSSMMAMGASDC
EDSEHSDSTASNDGISGKEIMRIRERSSWYLSNAEVQINSWRIPIWQKSKICFYVMGYPA
AELVESVSSGGGEIEIEKLPLHEVEIRRRELLPVFKQFQYSDRHSSDRDYAMT

Transcript Sequence

Transcript ID

Zm00001d038156_T025
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:149721812:149731441:-1 gene:Zm00001d038156 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:autophagy18g description:Autophagy-related protein 18g
Sequence

GCAACAGCGAGGAGAGAGAAGGGAAAAGGGTGAAGGAAGCCAGGGCCCAGGGAGTTGTTG
AATTTCGGTTCTGGTCGGCGTCGGAGGGGAAGGGACGACGAGCGGCGAGGAAGAGGTGTG
CGAGGGGAGGAGGGATATGGTGGCCAGCTGAGTCTGCGGATTGCGGCGGCAGCGGGGATC
GGAGGCAGTGAGGGGCGGCGGCACTCGGATGGTACTGGCTTTCGCCAGCCCCGGAGGCGG
CGATCGTGGATGGGCAGCGGCGGGATTGCGGGGCGGGGGTTGTAGGAGCGGTGGCGGCGG
GGAAGTTGGACTCGGAGCGGGTGCTTGTGCTGGTCTCCGGGCTGGGGCAGGGAGAGGAGG
TGAGGGAGCGGCGGGGAGGGATGAGGCGGGGGAAGGGGGCAAGGAATGGGTTGCTGCCGA
GTTCGCTGCGGATCATATCGTCCTGCCTCAAGACGGTGACCTCCAACGCCGGCTCCGTCG
CGTCCAGCGTGCGCTCGGCCGGCGCCTCCGTCGCCGCATCCATCTCCTCCCAGGCAGAGG
ACGAGAAGGATCAGGTTTTGTGGGCTGGATTCGATAAACTAGAGCTTCATCCATCATCAT
TCAAGCATGTCCTGCTTGTTGGTTATTCAAATGGGTTTCAAGTGCTTGATGTTGAGGATG
CTGCAAATGTTTGTGAATTGGTCTCAAAACATGATGGCCCAGTTACGTTTTTACAAATGC
AACCCACTCCAGTCGGCTCTGAAGGCATTGAAGGATTCAGAGCATCACATCCCATGCTTC
TAGTTGTTGCTGGTGATGAGACAAACGGCCTGGGTGCGATTCAAGGTGGTCGCTTAAGTG
CTCTTATCAGAGACACAAACAGTGAGCATCAAGCTGTAAATTGCATTTCAACCCCAACAG
TTGTCCGTTTCTACTCTTTGAAGTCTCACACCTATGTACATGTTCTTCGATTCCGGTCTG
CTGTATATTTAGTTCGCTGCAGTCCTAGGATTGTTGCTGTAGCACTTGCAGCACAAATCT
ACTGCTTTGACGCTGTTACTCTTGAGAACAAGCTCAGCGTCTTGTCATATCCTTTGCAAG
GTGCACCTGGGGTAAATATTGGGTATGGCCCGATGGCTGTTGGCCCCAGATGGTTAGCCT
ATGCCACAAATACTCCTTTATTGTCAAACACAGGCCGCCTAAGTCCACAGAACCTCACAC
CTTCGCCAGGAGTGAGCCCATCTACTTCTCCCAGCAGTGGAAGTTTAGTTGCTAGATATG
CAATGGAGTCTAGCAAGCAGTTAGCTTCTGGTATTATTGACATGGGATATACATTTTCAA
AGTACTGCCAGGAACTTCTGCCAGATGGTTCTAACTCCCCTTTGTCATCGAGCCCAGGCA
GGAGATCTGGTAAAATTCTTTCCAGTGTGCATCCACTGGAAGCTGACAATGCAGGCATGG
TAGTCATCAAGGATTTCACATCCAAAATTGTTGTCTCACAGTTTAAGGCTCACACAAGTC
CGATATCTGCTCTTTGTTTTGACCCTAGTGGAACACTTTTGGTGACAACCTCTGTTCATG
GCCATAACATAAATGTTTTCAGGATCATGCCAACCTGCATTGCTAATGGCTCAGGCGCAA
CACGTTATGATTGGACAGCTTCTCATGTTCATCTCTATAAACTGTATCGTGGCATGACAT
CAGCTGTCATACAAGACATCTCGTTTAGTCATTTTAGTCAATGGATATCTATTGTTTCAT
CTCGAGGTACCTGCCATATTTTTACATTGTCCCCATTTGGTGGTGATGCCAGTCTGCAGC
CACAGAATTCTCACAGTGATGGGCCCCCTCTTGCCCCATGTCAGTCAAGGCCATGGTGGT
CAAAGCCATCCTTTCTTATGGACCAACAGCTTCACCAAGTTCCCTCAACTGTGACACATT
CGGTTGTCAGTAGGATAAAGAATAACACTTCTGGTTGGCTAAATAATGTCAGCAATGTGG
CTGCTTCTGCAAGTGGAAAACTATCTGTACCATCTGGCGCTGTAACTGCTGTTTTCCATA
ATTCCATCTACCAGGGTTCTTTGCCAGTTCCATCTAAGGCTAATGCTTTAGAGCATCTAC
TGGTGTATTCGCCATCTGGTCATGTCATTCAACATGAACTTTTACCTTCTTCAGGTTCTG
AGTCCTCTGGTAGCAGCCCAAGAGTTGGTTCAGGTCCTAACTTGCAACTACAAGATGATG
AGATGCATGTTACTGCTGAACCAATTCAATGGTGGGATGTGTGCCGTAGGACAAACTGGC
CAGAAAGAGATGAAAACATTGCCAACATTGTATTGTATAACCAAAGAAGCAGTATGATGG
CTATGGGTGCTTCTGACTGTGAAGATAGCGAGCATTCGGATTCCACTGCATCAAATGATG
GTATCTCTGGGAAAGAGATTATGAGAATCCGAGAAAGGTCAAGCTGGTATCTATCTAATG
CAGAAGTACAGATAAACTCGTGGCGGATTCCCATCTGGCAGAAATCTAAGATTTGCTTCT
ATGTGATGGGCTATCCTGCTGCAGAGTTGGTCGAATCAGTTAGCAGTGGTGGTGGAGAAA
TTGAGATTGAGAAGTTACCTCTTCACGAGGTTGAGATCAGGAGAAGGGAATTGCTCCCTG
TATTCAAGCAGTTCCAATATTCTGATCGACATTCCAGTGATAGGGATTATGCAATGACGT
AGGAATATTGCAAATGGAGGCTTTCAGAATGCCTTGTCCCACATCAGTAATGCACAGAAT
AGCTCTGTAAAGGATAATGGTGAATATGAAACCAAACCGGTGGCTTTGTCTGGGTTTTAC
GCAGACACGAGGAAAACAGCTAACACAAATGGTCTAGCTAGGCAAACATTCTCAGCTGTT
AATCTTCAGCAAGTGGGGAAGTGCAATTCTATTGAATCTCTTAACACTGCAATTGTGTCT
GGCAAAACAGAGAATGGGAACAATGGCTATATATCCACGCCACCTGAAACAAAAGCGTCT
ATCAGATCATTGAGCAGCTATTCTCTCTTGGATGGACATGTGGACGGAATGCTGTCTCCA
AATAGCGCATCACACAAGCCAGAAACAACAAATAATTCTGTGCTCAGCAATGCTGCAAGC
ACTGATGTACAAAATGGGTGTCTCACCACTGTCGATTCTGGACAGCAGGAGGCGTCTCAT
TCTCACAGCTCAGTGGAGTTTACCCAGTATTTCCAAGAGGGCTATTGTAAAATATCAGAA
CTCGATGACTGCCGTGAGTTAACTGAAGCTGTTACTGATGCTGACAGCAGCAGCAGCCAC
TGCGAGAGAGAGAAGCCCGAGGAAGATGGGGATAACGATGATTTGCTCGGAGGAGTTTTT
GCCTTCAGCGAAGAAGGTTGAACTTACTATATACTGCCTTACTTGAGATCGAGATATAAC
GAAAAATGTGCTCAAAACAAAACATTCAGTGTGCAATAGTATGTAGGGGATGG