Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d038128_T007
CDS Infomation

cds chromosome:B73_RefGen_v4:6:148806702:148816033:-1 gene:Zm00001d038128 gene_biotype:protein_coding transcript_biotype:protein_coding description:Preprotein translocase subunit SCY2 chloroplastic
Sequence

ATGCAGGTTCTCTGTCATGTTCTTCCATCACTTGAAAAGCTCCGCAAGGAAGGATTAGAT
GGCCATGAGAAGTTAAAAGGCTATATATGGTGGCTTTCTTTGTGGTTTGCAACTGTGGCT
GCTTTTACTGTGTCATGCTTTTCCCTGCAGTATTCAGTATATGCTGCAAGTTACAGGGTC
AAGCATGTAATTATAACAAGTCTTCTGCTTGTTCTTGGTGCAATGTCAATGACATGGATT
TGTGACACCATTACAGAATTTGGATTTGGACATGGCTCATCTTTGATTATCTGTGTGGGA
ATTTTGACTGGCTACACAGATACACTACACAAGATGATAACTCAGTTTTCAGGGAATTTT
TCCTATTGTTGGCCTTACATCTTGGGAGTAGCTGGAATTTTTATGATACTCACCATGGGG
GCTGTGTTGGTGACTGAAGGATGCAGGAAGATAAAGCTTCAGTACTATGGATTCAAATTA
GCATCTGGTGCAGGGAATGAAAGCAGCCCAGTTACAGAGGTTGAGCCATATATCCCCTTC
AACATCAATCCAACTGGAATGCAGCCCTTGCTTACAACCTCATACTTACTAGCTTTTCCA
AGTATCATGGCCAGTATTTTTGCCTCACCCTTTTGGGAAAACTTGAGGGAAATTTTGAAT
CCAAAGACTTCAACTGGTGGTAGTCCCTGGGTTTATTACTTGACATATGCTTTCCTTGTC
TTCATCTTCAATATTTTTGATATTGCTAACTTACCCAAAGAGATATCTGATTACCTGAAT
AAGATGTGTGCGAGGGTACCAAGGATAAAGCCTGGAAGAGCAACAGTAGACTATCTTACA
AAGATACAAACATCAACACGTTTCTGGGGAGGTCTACTGCTAAGCTTGCTTGCAACTTCC
TCTTTATTGCTTGACCGATATCTCAGGCAAATAAATGAAGGGTTGTCAATAGGATTCACA
TCAGTCTTGATTATTGTGGGCTCAATTATTGAGCTTAGAAGATCATATCAAGCGTACAAT
GTGATGCCAGCACTGAGCAAAGTTTTGAGGAGATATGGTGCTTAA

Peptide Sequence

PEP ID

Zm00001d038128_P007
PEP Infomation

pep chromosome:B73_RefGen_v4:6:148806702:148816033:-1 gene:Zm00001d038128 transcript:Zm00001d038128_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:Preprotein translocase subunit SCY2 chloroplastic
Sequence

MQVLCHVLPSLEKLRKEGLDGHEKLKGYIWWLSLWFATVAAFTVSCFSLQYSVYAASYRV
KHVIITSLLLVLGAMSMTWICDTITEFGFGHGSSLIICVGILTGYTDTLHKMITQFSGNF
SYCWPYILGVAGIFMILTMGAVLVTEGCRKIKLQYYGFKLASGAGNESSPVTEVEPYIPF
NINPTGMQPLLTTSYLLAFPSIMASIFASPFWENLREILNPKTSTGGSPWVYYLTYAFLV
FIFNIFDIANLPKEISDYLNKMCARVPRIKPGRATVDYLTKIQTSTRFWGGLLLSLLATS
SLLLDRYLRQINEGLSIGFTSVLIIVGSIIELRRSYQAYNVMPALSKVLRRYGA

Transcript Sequence

Transcript ID

Zm00001d038128_T007
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:148806702:148816033:-1 gene:Zm00001d038128 gene_biotype:protein_coding transcript_biotype:protein_coding description:Preprotein translocase subunit SCY2 chloroplastic
Sequence

CCCCCGAGCCGAGCGTTCCCCTCGTTGCCGCGGGCCGGCCGGAGGTAGGATTCCTTCAAA
TTCCCGCTGCGTGCGACGGCACGCCGGCGGTCGCCGCTATGTCCCCCTCTCTCGTGCTGG
TGCACTCACTCCCGCTCCCTTCTCGCCGCGCGCTCCCCATCCAGCTGCCCCGCCGCCTCG
CCCCCAAACACCCGTCCCAGTGGTCGCTCCGCACGCCTCGACGTCTCGCTGTCTTTGCCA
GGGCTTCGGCGTCCGTTGTGGTGTCGCCGCACGGCGAGGGAGGTGGTGGCACGGCGGCGG
GGCGGAAGAGCACGGGGTATAGGAACCGGTTCCTGGACCTGGCGCGGCTGGGGGCCGTGG
CGGAGGGCGCGGCGGAGGCCTTCTTCCGCAGCGAGATCCGGCGGCGGCTGGCCGTCACTG
CCGCGCTCATCGTGCTCAGCCGCGTGGGGTCTATTCCATTCCTCCCTCGGATTACACGGT
GGCGAGCTGTGCATGGGTTTTTGTTTGGGATTCTCATAGCATGTAGTTCTACCTTTGTGC
AGATGACCTTGGCGATTTCTCCTCAGAATTGAAGCTTTCTTTTTTCCAGCTGGGGATCAG
TCATCAAATTTCAGCATCTATTGTCATGCAGGTTCTCTGTCATGTTCTTCCATCACTTGA
AAAGCTCCGCAAGGAAGGATTAGATGGCCATGAGAAGTTAAAAGGCTATATATGGTGGCT
TTCTTTGTGGTTTGCAACTGTGGCTGCTTTTACTGTGTCATGCTTTTCCCTGCAGTATTC
AGTATATGCTGCAAGTTACAGGGTCAAGCATGTAATTATAACAAGTCTTCTGCTTGTTCT
TGGTGCAATGTCAATGACATGGATTTGTGACACCATTACAGAATTTGGATTTGGACATGG
CTCATCTTTGATTATCTGTGTGGGAATTTTGACTGGCTACACAGATACACTACACAAGAT
GATAACTCAGTTTTCAGGGAATTTTTCCTATTGTTGGCCTTACATCTTGGGAGTAGCTGG
AATTTTTATGATACTCACCATGGGGGCTGTGTTGGTGACTGAAGGATGCAGGAAGATAAA
GCTTCAGTACTATGGATTCAAATTAGCATCTGGTGCAGGGAATGAAAGCAGCCCAGTTAC
AGAGGTTGAGCCATATATCCCCTTCAACATCAATCCAACTGGAATGCAGCCCTTGCTTAC
AACCTCATACTTACTAGCTTTTCCAAGTATCATGGCCAGTATTTTTGCCTCACCCTTTTG
GGAAAACTTGAGGGAAATTTTGAATCCAAAGACTTCAACTGGTGGTAGTCCCTGGGTTTA
TTACTTGACATATGCTTTCCTTGTCTTCATCTTCAATATTTTTGATATTGCTAACTTACC
CAAAGAGATATCTGATTACCTGAATAAGATGTGTGCGAGGGTACCAAGGATAAAGCCTGG
AAGAGCAACAGTAGACTATCTTACAAAGATACAAACATCAACACGTTTCTGGGGAGGTCT
ACTGCTAAGCTTGCTTGCAACTTCCTCTTTATTGCTTGACCGATATCTCAGGCAAATAAA
TGAAGGGTTGTCAATAGGATTCACATCAGTCTTGATTATTGTGGGCTCAATTATTGAGCT
TAGAAGATCATATCAAGCGTACAATGTGATGCCAGCACTGAGCAAAGTTTTGAGGAGATA
TGGTGCTTAAGAGTATGTAAGCTGATACGTTGGTGATGATGGCACCATCCACTAGCTCGT
GGTGTTGCAAGGTCGATTGGTCTTTAGAAACAGCATGGATATGATGAGAAGTTTACCGCT
CAAGCTTCTGTTAGATTAAAAGGTGGAAGGAACATGGCTTTACAATCACATCGGACTTTA
TCGACAAGGTGAACTGAGGAAGCAACAAACATGCCCAACAACATGGCTGTGTGTATTTGT
TGGAAGTGATCTAAAATCTTCCATGTCCTAATCGCCATACTGGATCACATAGCTAATCTG
TTGGGTTCTATAAATTCTCCACCGTTCAAATGCTCCGAAAGGAAGGGCCTTTGGATAAGT
TTCTCTTTTTTTCCCTTTTTTTGTTTGGGTGTGCACACATTGTTGGACGGGCTGTAGTTG
AATGAGTAGAGTGTACGCCTCGGGCTGAAGATGAGTCGGATTCAACGACGAACATTTTTG
TTGTGCCCGCGAATGGCCAATATTTCGCTTTC