Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d038123_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:6:148739722:148748486:1 gene:Zm00001d038123 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative DUF21 domain-containing protein

Sequence

ATGGTCATTTGCTATCCAATTTCTTACCCTATTGGGAAGGTCCTGGACTGTGCTCTTGGG
CACAATGAGTCTGCACTTTTTAGGCGAGCTCAGTTGAAAGCTCTAGTTTCAATCCATGGC
AAAGAGGCTGGCAAGGGCGGAGAGCTTACCCATGATGAGACTACAATCATAAGTGGAGCC
TTGGACCTGACCGAAAAGACTGCTGCAGAAGCTATGACACCTATTGAGTCAACTTTCTCA
CTAGATGTGGATTCTAAGTTGGATTGGGAAGCGATTGGGAAAATTCTTGCCCGTGGTCAT
AGTCGTGTTCCTGTATACTCAAGAAACCCTAAAAACATCATCGGTCTCCTATTGAGTCTT
TTGACTGTTCGTGCTGAAACGGAGACGCCGGTTAGTGCTGTTTCAATTAGAAGGATTCCA
AGGGTTCCTTCAGACATGCCTTTGTATGATATACTCAATGAGTTTCAGAAAGGAAGTAGT
CATATGGCTGCTGTTGTGAAGGCTAAACCTAAAACTGAACCACCGCCTGACAGAACTGAA
CCAAATAGGGAAGCAGTTGGGCCAGCACAATTGACTGTTACCTTGTTATCTAATGCTGAA
GAAAGTGCAGACAATGTGGTTGTGGATATCGAAAGACCACATAACAGGCAGATTAATGGG
ATCCCAGCATCTAACGCAGTGCCTAGGTCATCAGAGGATATTGAGGATGGTGAGGTCGTT
GGAATCATCACACTTGAGGATGTATTTGAAGAACTCCTACAGGAGGAAATTGTGGATGAG
ACTGATGAATATGTTGATGTCCATAAAAGGATCCGAGTAGCTGCTGCTGCTGCTGCATCA
TCGGTTGCAAGGGCTCCATCCGTTAGGAGATTAACGGGCCAAAAGGCTGCAAACCTTCAG
GGAGCACAGAATCGCCAAGGACAGCAGCCTCCTGGAATTCTCAAGAAACCTACTGAGGGT
GATTCAAACTCATCAAAACAAGTGAACCTTGTCGAACCTCTTCTTGAAAAGAGGAGGTAA

Peptide Sequence

PEP ID

Zm00001d038123_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:6:148739722:148748486:1 gene:Zm00001d038123 transcript:Zm00001d038123_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative DUF21 domain-containing protein

Sequence

MVICYPISYPIGKVLDCALGHNESALFRRAQLKALVSIHGKEAGKGGELTHDETTIISGA
LDLTEKTAAEAMTPIESTFSLDVDSKLDWEAIGKILARGHSRVPVYSRNPKNIIGLLLSL
LTVRAETETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKPKTEPPPDRTE
PNREAVGPAQLTVTLLSNAEESADNVVVDIERPHNRQINGIPASNAVPRSSEDIEDGEVV
GIITLEDVFEELLQEEIVDETDEYVDVHKRIRVAAAAAASSVARAPSVRRLTGQKAANLQ
GAQNRQGQQPPGILKKPTEGDSNSSKQVNLVEPLLEKRR

Transcript Sequence

Transcript ID

Zm00001d038123_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:148739722:148748486:1 gene:Zm00001d038123 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative DUF21 domain-containing protein

Sequence

GCCTAGCAGTGGGTGCTAACTTTGTATGGCTCGTACGCATTCTCATGGTCATTTGCTATC
CAATTTCTTACCCTATTGGGAAGGTCCTGGACTGTGCTCTTGGGCACAATGAGTCTGCAC
TTTTTAGGCGAGCTCAGTTGAAAGCTCTAGTTTCAATCCATGGCAAAGAGGCTGGCAAGG
GCGGAGAGCTTACCCATGATGAGACTACAATCATAAGTGGAGCCTTGGACCTGACCGAAA
AGACTGCTGCAGAAGCTATGACACCTATTGAGTCAACTTTCTCACTAGATGTGGATTCTA
AGTTGGATTGGGAAGCGATTGGGAAAATTCTTGCCCGTGGTCATAGTCGTGTTCCTGTAT
ACTCAAGAAACCCTAAAAACATCATCGGTCTCCTATTGAGTCTTTTGACTGTTCGTGCTG
AAACGGAGACGCCGGTTAGTGCTGTTTCAATTAGAAGGATTCCAAGGGTTCCTTCAGACA
TGCCTTTGTATGATATACTCAATGAGTTTCAGAAAGGAAGTAGTCATATGGCTGCTGTTG
TGAAGGCTAAACCTAAAACTGAACCACCGCCTGACAGAACTGAACCAAATAGGGAAGCAG
TTGGGCCAGCACAATTGACTGTTACCTTGTTATCTAATGCTGAAGAAAGTGCAGACAATG
TGGTTGTGGATATCGAAAGACCACATAACAGGCAGATTAATGGGATCCCAGCATCTAACG
CAGTGCCTAGGTCATCAGAGGATATTGAGGATGGTGAGGTCGTTGGAATCATCACACTTG
AGGATGTATTTGAAGAACTCCTACAGGAGGAAATTGTGGATGAGACTGATGAATATGTTG
ATGTCCATAAAAGGATCCGAGTAGCTGCTGCTGCTGCTGCATCATCGGTTGCAAGGGCTC
CATCCGTTAGGAGATTAACGGGCCAAAAGGCTGCAAACCTTCAGGGAGCACAGAATCGCC
AAGGACAGCAGCCTCCTGGAATTCTCAAGAAACCTACTGAGGGTGATTCAAACTCATCAA
AACAAGTGAACCTTGTCGAACCTCTTCTTGAAAAGAGGAGGTAACTCTAAAAACGTAGCC
GATAAAACGCATGGAATCAAGCCGGAAGAGCCTATGGTTCTTGCTATTATAACAAGAGGT
AAATATAGATGAACTCGTTGTTGTAAATTCCAACAGGAGCTTTTGGTGTCATGGACATTA
GTCATGAATTCTCTCTCCCCCTCTCCCCTTCTCCCCTCTTTGGTTATGGACTGCGAAAGT
AGAATGGCCACTCTTGAAT