Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d038121_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:6:148613627:148616192:-1 gene:Zm00001d038121 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:sugary4 description: sugary4
Sequence

ATGGTGCTCTGCCTCTTCGGTGGTGGCGGCGGGGACGGACCCGCGCTGGAGATTGAGCTC
GACCCGTACGTCCACCGGACCGGCGATGTCTGGCACGTCTCGATGGAGAGCGTGGAGGGG
TACGCCCGCTACGGCTTCCGCAGCGGGCTGTTCGCAATGTTTGGCATTGACCGCCCGCTA
CTCGACCCGTACGCCAAGGTGATCGGGGACTTCGTCGCTGGCGACTCTGTTGATGAGGAT
GGGCTAGCTGTGCCATCCATAAGGTGTCTCGCGTCCTTGAAGAATGCACCCAACTACGAT
TGGGGCAGGGACAAGCACCCATGCTTGCCATTGGAGAAGCTGGTGGTCTACCGGGCAAAT
GTGGCTTTGTTCACCAAGGATAGGTCGAGTCGGCTGGCAGACAATGCCGCTGGTACTTTC
TCCGGCATGTCTGCAAAGGTGGAACACTTCAGGCATCTTGGTGTCAATGCAGTTTTGCTG
GAGCCAGTTTTCCCATTCCACCAAGTGAAGGGACCATATTTTCCATACCATTTTTTTTCA
CCTATGAGCTTGTATAGCAGTGAATGCTCCAGTGTTTCAGCTATCAAGTCTATGAAGGAT
ATGGTCAAAACAATGCACAGAAATGGGATAGAGGTTCTCTTGGAGGTTGTTTTCACGCAT
ACTGCTGAAGGAGGGGCGGAGTGTCAGATGATATCACTTCGAGGCATCGATGGTTCCTCG
TACTACATTGCTGATGGAATCGCTGGATGCAAGGCAAGTGTGTTGAATTGCAACCATCCA
GTGACTCAGAAGCTGATTTTGGACAGCCTCCGCCATTGGGTGCTCGACTTCCATGTTGAT
GGGTTCTGCTTCATCAATGCTCCTTTCCTCGTCAGAGGTCCACGTGGTGAGGGCCTCTCA
CGGCCTCCACTTCTGGAAGCCATAGCATTTGATCCTGTTCTTTCAAAGACTAAGATCATT
GCAGATCCTTGGTCTCCGCTTGACATATCTAATGTGCAATTTCCATTCCCTCATTGGAAA
AGATGGGCTGAGATGAACACAAGATTCTCTATGGATGTGCGCAAGTTTCTTAAGGGAGAA
GCACTTATCAGTGATCTTGCTACACGTTTGTGTGGCAGTGGGGACTTATTTTCCTCAAGG
GCCCCAGCATTTTCGTTCAATTATGTATCCAGGAATTCTGGACTCACTCTTGTTGATCTA
GTGAGCTTCAGCAGTGATGAGCTTGCTTCTGAGTTCAGCTGGAATTGTGGTGAAGAAGGA
CCATCGGAGAACAACGCAGTCCTTCAAACCAGGCTAAGACAGATACGCAACTTCTTGTTT
ATTCTATTCATTTCCCTTGGTATTCCTGTTCTTAACATGGGGGATGAATGTGGAAACTCA
GCTGCTGGTTCAACATCATACAAGGATAGAGGGCCTCTGAACTGGAAAGCCTTGAAGACC
GCTTTTGTTAAGGAAGTTACCGGGTTTATTTCGTTTCTATCTGCACTAAGGAGTCGACGA
GCAGACATTTTCCAGAGATGCGAGTTTCTAAAACTTGAAAATATACATTGGTATGGGAGT
GATTTATCTGAGCCATGTTGGGAGGATCCTACTAGCAACTTTCTTTGCTTGCACATAAAT
GCAGAGCTGGACGAGAAGCTACCAGATTCGACTGGAGGTGATTTGTATATCTGTTTCAAT
GCAAACGAGGAGTCAGCGAGTGCTACTTTACCAGCTATTGCAGAAGGATCCATGTGGCTG
CGCTTGGTTGATACATCACTTGCATTTCCAGGTTTCTTTTCCAGAGGGTCTAGTCATGAA
ACACACCAGGTGCTAGGATTTTCCTCATATCAAGTGAAGGCACATAGCTGTGTTCTGTTC
GAATCCAAGAGGGTTCTTTCATAG

Peptide Sequence

PEP ID

Zm00001d038121_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:6:148613627:148616192:-1 gene:Zm00001d038121 transcript:Zm00001d038121_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:sugary4 description: sugary4
Sequence

MVLCLFGGGGGDGPALEIELDPYVHRTGDVWHVSMESVEGYARYGFRSGLFAMFGIDRPL
LDPYAKVIGDFVAGDSVDEDGLAVPSIRCLASLKNAPNYDWGRDKHPCLPLEKLVVYRAN
VALFTKDRSSRLADNAAGTFSGMSAKVEHFRHLGVNAVLLEPVFPFHQVKGPYFPYHFFS
PMSLYSSECSSVSAIKSMKDMVKTMHRNGIEVLLEVVFTHTAEGGAECQMISLRGIDGSS
YYIADGIAGCKASVLNCNHPVTQKLILDSLRHWVLDFHVDGFCFINAPFLVRGPRGEGLS
RPPLLEAIAFDPVLSKTKIIADPWSPLDISNVQFPFPHWKRWAEMNTRFSMDVRKFLKGE
ALISDLATRLCGSGDLFSSRAPAFSFNYVSRNSGLTLVDLVSFSSDELASEFSWNCGEEG
PSENNAVLQTRLRQIRNFLFILFISLGIPVLNMGDECGNSAAGSTSYKDRGPLNWKALKT
AFVKEVTGFISFLSALRSRRADIFQRCEFLKLENIHWYGSDLSEPCWEDPTSNFLCLHIN
AELDEKLPDSTGGDLYICFNANEESASATLPAIAEGSMWLRLVDTSLAFPGFFSRGSSHE
THQVLGFSSYQVKAHSCVLFESKRVLS

Transcript Sequence

Transcript ID

Zm00001d038121_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:148613627:148616192:-1 gene:Zm00001d038121 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:sugary4 description: sugary4
Sequence

ACCCGCGCCCATCATGGCCTCCTCCCTCCCCGCGCCGCCGGCCTCGCCCTCTTCCTGTCC
CAGTCCAAGGATGGGGCCGCTAACTTCGCGGTTTACAGCAAGATCGCCAAGGGCATGGTG
CTCTGCCTCTTCGGTGGTGGCGGCGGGGACGGACCCGCGCTGGAGATTGAGCTCGACCCG
TACGTCCACCGGACCGGCGATGTCTGGCACGTCTCGATGGAGAGCGTGGAGGGGTACGCC
CGCTACGGCTTCCGCAGCGGGCTGTTCGCAATGTTTGGCATTGACCGCCCGCTACTCGAC
CCGTACGCCAAGGTGATCGGGGACTTCGTCGCTGGCGACTCTGTTGATGAGGATGGGCTA
GCTGTGCCATCCATAAGGTGTCTCGCGTCCTTGAAGAATGCACCCAACTACGATTGGGGC
AGGGACAAGCACCCATGCTTGCCATTGGAGAAGCTGGTGGTCTACCGGGCAAATGTGGCT
TTGTTCACCAAGGATAGGTCGAGTCGGCTGGCAGACAATGCCGCTGGTACTTTCTCCGGC
ATGTCTGCAAAGGTGGAACACTTCAGGCATCTTGGTGTCAATGCAGTTTTGCTGGAGCCA
GTTTTCCCATTCCACCAAGTGAAGGGACCATATTTTCCATACCATTTTTTTTCACCTATG
AGCTTGTATAGCAGTGAATGCTCCAGTGTTTCAGCTATCAAGTCTATGAAGGATATGGTC
AAAACAATGCACAGAAATGGGATAGAGGTTCTCTTGGAGGTTGTTTTCACGCATACTGCT
GAAGGAGGGGCGGAGTGTCAGATGATATCACTTCGAGGCATCGATGGTTCCTCGTACTAC
ATTGCTGATGGAATCGCTGGATGCAAGGCAAGTGTGTTGAATTGCAACCATCCAGTGACT
CAGAAGCTGATTTTGGACAGCCTCCGCCATTGGGTGCTCGACTTCCATGTTGATGGGTTC
TGCTTCATCAATGCTCCTTTCCTCGTCAGAGGTCCACGTGGTGAGGGCCTCTCACGGCCT
CCACTTCTGGAAGCCATAGCATTTGATCCTGTTCTTTCAAAGACTAAGATCATTGCAGAT
CCTTGGTCTCCGCTTGACATATCTAATGTGCAATTTCCATTCCCTCATTGGAAAAGATGG
GCTGAGATGAACACAAGATTCTCTATGGATGTGCGCAAGTTTCTTAAGGGAGAAGCACTT
ATCAGTGATCTTGCTACACGTTTGTGTGGCAGTGGGGACTTATTTTCCTCAAGGGCCCCA
GCATTTTCGTTCAATTATGTATCCAGGAATTCTGGACTCACTCTTGTTGATCTAGTGAGC
TTCAGCAGTGATGAGCTTGCTTCTGAGTTCAGCTGGAATTGTGGTGAAGAAGGACCATCG
GAGAACAACGCAGTCCTTCAAACCAGGCTAAGACAGATACGCAACTTCTTGTTTATTCTA
TTCATTTCCCTTGGTATTCCTGTTCTTAACATGGGGGATGAATGTGGAAACTCAGCTGCT
GGTTCAACATCATACAAGGATAGAGGGCCTCTGAACTGGAAAGCCTTGAAGACCGCTTTT
GTTAAGGAAGTTACCGGGTTTATTTCGTTTCTATCTGCACTAAGGAGTCGACGAGCAGAC
ATTTTCCAGAGATGCGAGTTTCTAAAACTTGAAAATATACATTGGTATGGGAGTGATTTA
TCTGAGCCATGTTGGGAGGATCCTACTAGCAACTTTCTTTGCTTGCACATAAATGCAGAG
CTGGACGAGAAGCTACCAGATTCGACTGGAGGTGATTTGTATATCTGTTTCAATGCAAAC
GAGGAGTCAGCGAGTGCTACTTTACCAGCTATTGCAGAAGGATCCATGTGGCTGCGCTTG
GTTGATACATCACTTGCATTTCCAGGTTTCTTTTCCAGAGGGTCTAGTCATGAAACACAC
CAGGTGCTAGGATTTTCCTCATATCAAGTGAAGGCACATAGCTGTGTTCTGTTCGAATCC
AAGAGGGTTCTTTCATAGTTTGTGATGTCAAACATGAAGCTCGTGTGGTTTCAGCAATAA
TTAGGAACTTTGTGGTTACTATATTACTATCTAATTTTGGGAGGCCCTCAGTTCCAATAA
ATTGCCAATTGTAGATGGAATGTTTATGATAATAAAGTTCTTCATTTTCAT