Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d038113_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:6:148382390:148390037:1 gene:Zm00001d038113 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:required to maintain repression1 description:Required to maintain repression 1%3B Required to maintain repression1
Sequence	ATGGATCGCGCCACGCCGCGCGTTTGCGGCCGCCGCGGCGTATCCCAAGCGGCGGTGGAA GCTGCGCCGTCCTCCTCCCGCGCGCGCCGCCGCGATAAGGCGCCGGCCGTTGTCATGGAC CTTGGCGACGACGACTGCGGCGGTGGCGGGGCCAGGAAGACGGTTGGTGGCGCTGCAGGT AGGTGCGAGGGATCCACGAAGGCTCCTTTGCCTCTGCTGCCGCCGATGATGGTGCCGGCG GGAGCGGTGGCGCTGCGGACACGATCGAGGAGGCGGGCGATGCTGGCGGCGGCAGTGGTG GAAGAGGCGCCAACGAAGAAGAAGAAGAAGGAAGGAGCGATCCCAGATGCCGCGGAGGCG CCCCGTGGCCACGGGAGCAAGGCCGCTGCTACCTCGATGGCGACGTCGAGCCATAAGCGG CGCGCTGGGACCTCGAGGTCGACGTCGAGAGATAAGCGGCGCGCGCGCTCGGGACGTGCC TCGGAGCCAGCTCGCGTGGGCCGCGCGCGCAAGCGCAAAAGGAACGAGTTGGAGGCCCCC GCTCGGAGAGAACGTGTGAAGGCGCCATGTGTCAGTGAAAGTGATGACAACAGCGGGCGA GGCGATGACGCTTCTCATGACGGGGATGCGGAGCCTCGCGTCGGGGTCGCCATTGGCACT GATCTGGTTAACGGGGATCATCCGGCAGCTAAAGAGGTAGTGGAAGGTGCTGGTGACGAG GACACAGGGGACGGAGGGAACAGTGGCCTGGCATCGACTGCTGATGTGTTTGCTGAGGAG ATGGCACCCTTTGAAGATGACTACGATGATGAGATGTTGGAGGAGCAGCTTGTTGGAGAT GTGATTCGTGCTTACAGTAATGGCAGAAACTTCGATTCAGATGGAGTGGATTGGGAGGCA GAGGATGAGATGGAGTTCAATGACGATGCTGACAATAGTGATTTTATGGATGATGCTGAC GATAGTGATTTTATGGATGATGCTTATGAAGGTGGCAATTCCAAACCAATTCAAAATCAT GCTAAGTTGGAAATACAAGACTGGGTGAACCAGAAAGTTGTTTTGAGTGGAGGGAGGTGT GAGGCGAGGGGCGAGGGGGATCTGGAGGAAGAATTGGATGTGGGAAAGGAAGCAGATGAG GAGGACGTGGAACCAAAGAGTGAAGCGGCTCCAGGTTCTGATAAAAGGGTCTTGCAGTTA GAAATCCTAGGTTCCGATGAGGAAATCAAGGTGCTTGAAAATATGAGTAGTGCCCCATCC AGGAAGGCGTCAGTTCAATCGAAGTTACCAACTATTCCATCTTGTGTTGCATGGAGAACC CGATCATCATGGGGGGTAAATCAAGATAGACTATCGTACGATACATATTTTGAGGAATTA TCTGATGAGCCAAAAGAGGATGATGATGATACAGAGGTGGAACTTGATGAAGTTGAGGAT GACAACAATGACGATGACAGTAGTGATGCTTATGATAAAGATGACGAAGAGAAGGAGGAA GAGGAAGAAGAGGCTGAAAGAAGAAAACTTAATAACAGGATTTGCACATCCGATGAAGAC ATGATCAATATTACTGTTCCTACATCAAGATATGATATGTTTAAGAAAAAAAATTCCTCA AGATATGATATTGAGTGGGTGGAGGATGAAGATGCAAGTGTTGATATGTTACAGCCAGTT TCCTTTAAGAAAGATAGCAGCTGGAAGCCTGTGGCTGTTGGCAACGACACATTTACTGAG CAACAAAAGCGATCACGATTTACTTGGGAGCTTGAGAGGAGGAAAAAGCTTAAGCTTGAG ATGAAGACAAATCCTTTGCATGAGCGGGATTTGGACTCAGATCCGAACTCATCAGGTTCT GACCAGATCAGAAAGTATGGTTTCAAAAGTGATGGGAGTCATAAAGTTGATAGGAAAAAG AAGCATACATCGCCCAAATCGGGCAAGAAACCCAGCAGCGCAATCATACTAAAGCGGCAG TCTCTTTTGAAGCTTTTGGTAGATAAAATGAGTGGTGATAAAAGTTTAGCATCTTTTCCA TTTGATCAGAATCCTCAGCTTCAGTTTATTTTCAAAGAAATGCATCCATTGGTATTTTCA TTTGGAGATGAAGATCTAGTAGCAGCTGACAGGCCAGAGCAAGATGTTGGATTGGATATG TTATGGGCTGACTTTGACTTTGCTTTAGAGTCTGAGAATATCGGTACTTATTATGATGAT GAGTGTCAAGAAGGCAATCAACTAGATTTTTCTCTTGCCCCAGTAACACCCTGTTCTCGT GGGAAGCATGAATTTGTTATTGATGATCAAATAGGGATCAGATGCAAATACTGTTCCTTG GTAAACCTGGAGATCAAATTCATGTTTCCATCACTGGTGTCAGTGTTTGCCGAGAAATCA GCATGGCCAAATGACAAAGGCGTGAAAAATACACTGATGTTTCATGATCTTTATGAACAA GGAGTCAATGACACTGAACAATCTCAAGATATTCATCAATATGGAACGGTGTGGAATCTT ATTCCAGGGGTCATCAGTACTATGTATGAGCATCAGCGTGAAGCATTTGAATTTATGTGG ACAAATTTAGTTGGTGATATTAGACTTGATGAGATAAAGCATGGAGCAAAACCTGATGTT GTTGGTGGATGTGTTATCTGTCATGCTCCTGGAACAGGAAAGACACGATTAGCTATTGTG TTTATCCAGACATACATGAAGGTGTTTCCAGACTGTCGGCCAGTGATTATTGCACCACGT GGTATGCTCTTTGCTTGGGATGAGGAATTTAAGAAATGGAATGTTGATGTTCCTTTTCAT ATACTAAACACAACTGATTACACTGGAAAAGAGGATCGGGAGATATGCAAGTTAATAAAG AAAGAACATAGGACAGAAAAGTTGACAAGACTAGTCAAACTGCTTTCATGGAACAAAGGT CATGGTATTCTTGGAATAAGTTATGGTCTGTACACAAAACTGACCTCTGAAAAACCTGGC TGCACAGAAGAAAACAAAGTAAGAAGCATTCTTCTTGATAACCCTGGCTTACTTGTTCTT GATGAAGGACATACACCTAGGAATGAACGCAGTGTTATGTGGAAAACTCTAGGAAATGTG AAAACTGAGAAGCGTATAATTTTATCCGGAACTCCTTTTCAGAACAATTTTCTTGAGCTT TACAACATTCTTTGTCTGGTAAGGCCTAGATTTGGTGAAATGTTTTTGACGAAGTCAAGA GTAGGTCGAAGACATTATGTCTCAAAAAAGCAAAAGGATAAGTTTTCTGATAAATATGAA AAGGGTGTTTGGGCATCACTGACTAGCAATGTAACTGATGATAATGCGGAAAAAGTAAGA TCAATATTGAAACCATTTGTTCATATACATAATGGCAATATTCTTCGAACTCTTCCAGGA CTCAGGGAGAGTGTAATTATTCTGAAGCCTCTTCCCCTTCAAAAGAGTATCATTAAAAAG GTGGAAAACATTGGTTCTGGTAACAACTTCGAACATGAATATGTCATTTCTTTAGCTTCT ACACACCCTTCCCTTGTAACCGCCATTAACATGTCTGAGGAGGAAGCTTCACTTATTGAT AAACCTATGCTTGCTAAAGTGAGATCAAATCCATATGAAGGGGTAAAAACAAGATTTGTG ATCGAAGTTGTTCGTTTGTCTGAAGCATTAAGAGAGAAGGTTTTGATTTTTAGCCAATTT ATTCAGCCTCTAGAGTTGATAAAAGAGCATCTTCGCAAGTTCTTCAAATGGAGAGAAGGG AAAGAAATTCTTCAAATGGATGGAAAGATCCTTCCAAGATATCGCCAGGCTTCCATTGAA GCCTTCAATAATCCAAATAATGATTCCAGGGTGTTACTTGCATCTACAAGAGCATGCTGT GAAGGGATTAGCTTGACAGGTGCTTCAAGAATTGTGCTTCTAGATGTTGTTTGGAACCCA GCTGTTGGAAGGCAAGCCATCAGCAGAGCATTTAGGATAGGTCAGAAGAAATTTGTATAT ACATATAATTTGATAACTTATGGAACAGGTGAAGGTGACAAATATGATAGGCAAGCAGAA AAGGATCACTTATCCAAGTTGGTCTTCTCTACAGAAGACGAGTTCAATAATGTTAGGAAC ATGTTATCTAAAGCTGAAATGGAGCACTGTTCTAAGTTTATCTCAGAAGATAAAGTTTTG GAGGAGATGACTTCCCACGATCAACTTAAAGGAATGTTTTTGAAGATCCATTATCCACCA ACTGAGTCAAACATTGTCTATAGTTACAATCAAATTGCTACTGAGTGA

Peptide Sequence

PEP ID	Zm00001d038113_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:6:148382390:148390037:1 gene:Zm00001d038113 transcript:Zm00001d038113_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:required to maintain repression1 description:Required to maintain repression 1%3B Required to maintain repression1
Sequence	MDRATPRVCGRRGVSQAAVEAAPSSSRARRRDKAPAVVMDLGDDDCGGGGARKTVGGAAG RCEGSTKAPLPLLPPMMVPAGAVALRTRSRRRAMLAAAVVEEAPTKKKKKEGAIPDAAEA PRGHGSKAAATSMATSSHKRRAGTSRSTSRDKRRARSGRASEPARVGRARKRKRNELEAP ARRERVKAPCVSESDDNSGRGDDASHDGDAEPRVGVAIGTDLVNGDHPAAKEVVEGAGDE DTGDGGNSGLASTADVFAEEMAPFEDDYDDEMLEEQLVGDVIRAYSNGRNFDSDGVDWEA EDEMEFNDDADNSDFMDDADDSDFMDDAYEGGNSKPIQNHAKLEIQDWVNQKVVLSGGRC EARGEGDLEEELDVGKEADEEDVEPKSEAAPGSDKRVLQLEILGSDEEIKVLENMSSAPS RKASVQSKLPTIPSCVAWRTRSSWGVNQDRLSYDTYFEELSDEPKEDDDDTEVELDEVED DNNDDDSSDAYDKDDEEKEEEEEEAERRKLNNRICTSDEDMINITVPTSRYDMFKKKNSS RYDIEWVEDEDASVDMLQPVSFKKDSSWKPVAVGNDTFTEQQKRSRFTWELERRKKLKLE MKTNPLHERDLDSDPNSSGSDQIRKYGFKSDGSHKVDRKKKHTSPKSGKKPSSAIILKRQ SLLKLLVDKMSGDKSLASFPFDQNPQLQFIFKEMHPLVFSFGDEDLVAADRPEQDVGLDM LWADFDFALESENIGTYYDDECQEGNQLDFSLAPVTPCSRGKHEFVIDDQIGIRCKYCSL VNLEIKFMFPSLVSVFAEKSAWPNDKGVKNTLMFHDLYEQGVNDTEQSQDIHQYGTVWNL IPGVISTMYEHQREAFEFMWTNLVGDIRLDEIKHGAKPDVVGGCVICHAPGTGKTRLAIV FIQTYMKVFPDCRPVIIAPRGMLFAWDEEFKKWNVDVPFHILNTTDYTGKEDREICKLIK KEHRTEKLTRLVKLLSWNKGHGILGISYGLYTKLTSEKPGCTEENKVRSILLDNPGLLVL DEGHTPRNERSVMWKTLGNVKTEKRIILSGTPFQNNFLELYNILCLVRPRFGEMFLTKSR VGRRHYVSKKQKDKFSDKYEKGVWASLTSNVTDDNAEKVRSILKPFVHIHNGNILRTLPG LRESVIILKPLPLQKSIIKKVENIGSGNNFEHEYVISLASTHPSLVTAINMSEEEASLID KPMLAKVRSNPYEGVKTRFVIEVVRLSEALREKVLIFSQFIQPLELIKEHLRKFFKWREG KEILQMDGKILPRYRQASIEAFNNPNNDSRVLLASTRACCEGISLTGASRIVLLDVVWNP AVGRQAISRAFRIGQKKFVYTYNLITYGTGEGDKYDRQAEKDHLSKLVFSTEDEFNNVRN MLSKAEMEHCSKFISEDKVLEEMTSHDQLKGMFLKIHYPPTESNIVYSYNQIATE

Transcript Sequence

Transcript ID	Zm00001d038113_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:148382390:148390037:1 gene:Zm00001d038113 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:required to maintain repression1 description:Required to maintain repression 1%3B Required to maintain repression1
Sequence	GCGGAAGAAAAAGAGGATGCGGGTGTAGCAGCATCCCGGCATGATTGATGCCCCTGCAAC ATCCATCCTCGGAAAACCATCCAACCACATTTCGGCCTAGGGAAAGCACGCCGCACTCGA TCCGGCCGCCTCGGGCCTCGCCCCCCGCACCCGCCGCGCACCCGGCAGCCATTTCCCGGG CATTTGTCTCTCCTTGTCGTCCGCCTCCCCATGACCGGATCCCTCCCTGGCCCCGCGCCC GCCGCATGGAGCACCTGCCCAAACCCCTACGGGGCCCACCCGTCATAGTCCCTCCTGGGC CATAAACCTCCCCCAACCCACCGTACTCTCAAGTCTCAACTACCCCCTTCAATTCCTCTG CGCCGCGCCGCGCCGCGCCGTTGCAGCAACAGAATCTAGCGCCCCCACCGCACGCATGGA TCGCGCCACGCCGCGCGTTTGCGGCCGCCGCGGCGTATCCCAAGCGGCGGTGGAAGCTGC GCCGTCCTCCTCCCGCGCGCGCCGCCGCGATAAGGCGCCGGCCGTTGTCATGGACCTTGG CGACGACGACTGCGGCGGTGGCGGGGCCAGGAAGACGGTTGGTGGCGCTGCAGGTAGGTG CGAGGGATCCACGAAGGCTCCTTTGCCTCTGCTGCCGCCGATGATGGTGCCGGCGGGAGC GGTGGCGCTGCGGACACGATCGAGGAGGCGGGCGATGCTGGCGGCGGCAGTGGTGGAAGA GGCGCCAACGAAGAAGAAGAAGAAGGAAGGAGCGATCCCAGATGCCGCGGAGGCGCCCCG TGGCCACGGGAGCAAGGCCGCTGCTACCTCGATGGCGACGTCGAGCCATAAGCGGCGCGC TGGGACCTCGAGGTCGACGTCGAGAGATAAGCGGCGCGCGCGCTCGGGACGTGCCTCGGA GCCAGCTCGCGTGGGCCGCGCGCGCAAGCGCAAAAGGAACGAGTTGGAGGCCCCCGCTCG GAGAGAACGTGTGAAGGCGCCATGTGTCAGTGAAAGTGATGACAACAGCGGGCGAGGCGA TGACGCTTCTCATGACGGGGATGCGGAGCCTCGCGTCGGGGTCGCCATTGGCACTGATCT GGTTAACGGGGATCATCCGGCAGCTAAAGAGGTAGTGGAAGGTGCTGGTGACGAGGACAC AGGGGACGGAGGGAACAGTGGCCTGGCATCGACTGCTGATGTGTTTGCTGAGGAGATGGC ACCCTTTGAAGATGACTACGATGATGAGATGTTGGAGGAGCAGCTTGTTGGAGATGTGAT TCGTGCTTACAGTAATGGCAGAAACTTCGATTCAGATGGAGTGGATTGGGAGGCAGAGGA TGAGATGGAGTTCAATGACGATGCTGACAATAGTGATTTTATGGATGATGCTGACGATAG TGATTTTATGGATGATGCTTATGAAGGTGGCAATTCCAAACCAATTCAAAATCATGCTAA GTTGGAAATACAAGACTGGGTGAACCAGAAAGTTGTTTTGAGTGGAGGGAGGTGTGAGGC GAGGGGCGAGGGGGATCTGGAGGAAGAATTGGATGTGGGAAAGGAAGCAGATGAGGAGGA CGTGGAACCAAAGAGTGAAGCGGCTCCAGGTTCTGATAAAAGGGTCTTGCAGTTAGAAAT CCTAGGTTCCGATGAGGAAATCAAGGTGCTTGAAAATATGAGTAGTGCCCCATCCAGGAA GGCGTCAGTTCAATCGAAGTTACCAACTATTCCATCTTGTGTTGCATGGAGAACCCGATC ATCATGGGGGGTAAATCAAGATAGACTATCGTACGATACATATTTTGAGGAATTATCTGA TGAGCCAAAAGAGGATGATGATGATACAGAGGTGGAACTTGATGAAGTTGAGGATGACAA CAATGACGATGACAGTAGTGATGCTTATGATAAAGATGACGAAGAGAAGGAGGAAGAGGA AGAAGAGGCTGAAAGAAGAAAACTTAATAACAGGATTTGCACATCCGATGAAGACATGAT CAATATTACTGTTCCTACATCAAGATATGATATGTTTAAGAAAAAAAATTCCTCAAGATA TGATATTGAGTGGGTGGAGGATGAAGATGCAAGTGTTGATATGTTACAGCCAGTTTCCTT TAAGAAAGATAGCAGCTGGAAGCCTGTGGCTGTTGGCAACGACACATTTACTGAGCAACA AAAGCGATCACGATTTACTTGGGAGCTTGAGAGGAGGAAAAAGCTTAAGCTTGAGATGAA GACAAATCCTTTGCATGAGCGGGATTTGGACTCAGATCCGAACTCATCAGGTTCTGACCA GATCAGAAAGTATGGTTTCAAAAGTGATGGGAGTCATAAAGTTGATAGGAAAAAGAAGCA TACATCGCCCAAATCGGGCAAGAAACCCAGCAGCGCAATCATACTAAAGCGGCAGTCTCT TTTGAAGCTTTTGGTAGATAAAATGAGTGGTGATAAAAGTTTAGCATCTTTTCCATTTGA TCAGAATCCTCAGCTTCAGTTTATTTTCAAAGAAATGCATCCATTGGTATTTTCATTTGG AGATGAAGATCTAGTAGCAGCTGACAGGCCAGAGCAAGATGTTGGATTGGATATGTTATG GGCTGACTTTGACTTTGCTTTAGAGTCTGAGAATATCGGTACTTATTATGATGATGAGTG TCAAGAAGGCAATCAACTAGATTTTTCTCTTGCCCCAGTAACACCCTGTTCTCGTGGGAA GCATGAATTTGTTATTGATGATCAAATAGGGATCAGATGCAAATACTGTTCCTTGGTAAA CCTGGAGATCAAATTCATGTTTCCATCACTGGTGTCAGTGTTTGCCGAGAAATCAGCATG GCCAAATGACAAAGGCGTGAAAAATACACTGATGTTTCATGATCTTTATGAACAAGGAGT CAATGACACTGAACAATCTCAAGATATTCATCAATATGGAACGGTGTGGAATCTTATTCC AGGGGTCATCAGTACTATGTATGAGCATCAGCGTGAAGCATTTGAATTTATGTGGACAAA TTTAGTTGGTGATATTAGACTTGATGAGATAAAGCATGGAGCAAAACCTGATGTTGTTGG TGGATGTGTTATCTGTCATGCTCCTGGAACAGGAAAGACACGATTAGCTATTGTGTTTAT CCAGACATACATGAAGGTGTTTCCAGACTGTCGGCCAGTGATTATTGCACCACGTGGTAT GCTCTTTGCTTGGGATGAGGAATTTAAGAAATGGAATGTTGATGTTCCTTTTCATATACT AAACACAACTGATTACACTGGAAAAGAGGATCGGGAGATATGCAAGTTAATAAAGAAAGA ACATAGGACAGAAAAGTTGACAAGACTAGTCAAACTGCTTTCATGGAACAAAGGTCATGG TATTCTTGGAATAAGTTATGGTCTGTACACAAAACTGACCTCTGAAAAACCTGGCTGCAC AGAAGAAAACAAAGTAAGAAGCATTCTTCTTGATAACCCTGGCTTACTTGTTCTTGATGA AGGACATACACCTAGGAATGAACGCAGTGTTATGTGGAAAACTCTAGGAAATGTGAAAAC TGAGAAGCGTATAATTTTATCCGGAACTCCTTTTCAGAACAATTTTCTTGAGCTTTACAA CATTCTTTGTCTGGTAAGGCCTAGATTTGGTGAAATGTTTTTGACGAAGTCAAGAGTAGG TCGAAGACATTATGTCTCAAAAAAGCAAAAGGATAAGTTTTCTGATAAATATGAAAAGGG TGTTTGGGCATCACTGACTAGCAATGTAACTGATGATAATGCGGAAAAAGTAAGATCAAT ATTGAAACCATTTGTTCATATACATAATGGCAATATTCTTCGAACTCTTCCAGGACTCAG GGAGAGTGTAATTATTCTGAAGCCTCTTCCCCTTCAAAAGAGTATCATTAAAAAGGTGGA AAACATTGGTTCTGGTAACAACTTCGAACATGAATATGTCATTTCTTTAGCTTCTACACA CCCTTCCCTTGTAACCGCCATTAACATGTCTGAGGAGGAAGCTTCACTTATTGATAAACC TATGCTTGCTAAAGTGAGATCAAATCCATATGAAGGGGTAAAAACAAGATTTGTGATCGA AGTTGTTCGTTTGTCTGAAGCATTAAGAGAGAAGGTTTTGATTTTTAGCCAATTTATTCA GCCTCTAGAGTTGATAAAAGAGCATCTTCGCAAGTTCTTCAAATGGAGAGAAGGGAAAGA AATTCTTCAAATGGATGGAAAGATCCTTCCAAGATATCGCCAGGCTTCCATTGAAGCCTT CAATAATCCAAATAATGATTCCAGGGTGTTACTTGCATCTACAAGAGCATGCTGTGAAGG GATTAGCTTGACAGGTGCTTCAAGAATTGTGCTTCTAGATGTTGTTTGGAACCCAGCTGT TGGAAGGCAAGCCATCAGCAGAGCATTTAGGATAGGTCAGAAGAAATTTGTATATACATA TAATTTGATAACTTATGGAACAGGTGAAGGTGACAAATATGATAGGCAAGCAGAAAAGGA TCACTTATCCAAGTTGGTCTTCTCTACAGAAGACGAGTTCAATAATGTTAGGAACATGTT ATCTAAAGCTGAAATGGAGCACTGTTCTAAGTTTATCTCAGAAGATAAAGTTTTGGAGGA GATGACTTCCCACGATCAACTTAAAGGAATGTTTTTGAAGATCCATTATCCACCAACTGA GTCAAACATTGTCTATAGTTACAATCAAATTGCTACTGAGTGAAGTCGGTGGTAATAGTC AGTACCAGATTGTTTGTCTATATCTATGGCTAGGCATGCGTGGGAGGACCCTGCAGGCTT CATTTTCTTTATTATTGTCTACCGCACAATGAATCTGCAATTTTGTATCTTGGGAAGGAC TAAAAGCAGAAGTTAATAATGGGTGGCAGAGCCACAATGTACATGGTGGTTCACAAGGTT GTGGGCATTACGATGCCCATACCTATATCCAAATGTCATGTCTAATAATAAAACTATTGG ACCTTTTTGGCGGTTCAATTTTATTTACATAAAAGACAGCCTCAATTCGAATACATAGGC TCTGCCCCCTTTCAG