Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d038106_T035
CDS Infomation

cds chromosome:B73_RefGen_v4:6:148086172:148099610:-1 gene:Zm00001d038106 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase KEG
Sequence

ATGCGAGTACCATGCTGCTCGTTATGCAACGTCAGATATGACGAGGAGGAGCGGACGCCG
CTGCTCCTCCACTGCGGACATGGATTCTGCCGCGCGTGCCTCTCCCGCATGCTAGCGGCA
GCCCCCGGAGCCACGCTGCCGTGCCCGCGATGCCGCCATCTGACCGCCGTAGGCAACTCG
GTCTCTGCGCTGCGGAAGAACTTCCCCATTCTCTCTCTCCTCTCCACATCCCCCTCATCC
CCGTCTTTCCTCCACTCCGACTCGGGGTCATCCTCTGACGGCTCCGAAGACGAGGACGAC
TTCTTCGCGCGCCCCAGTCGCCGCCCCGCGCCCGCGCCCGCTGCCGCACCGCCCGGATGC
AGCTTCTTCGACCTCGCCTCGCACCCGGACCTCAAGCTCGCCCGTCGCATCGGGAGCGGC
CCGCCCGGGCCCGCCGGGCAGGAGGTGTGGGCCGGCACGCTGTCTCGTGGCGGTGGGGTC
AAGCGGTGCAAGCACCAGGTGGCAGTGAAGAGGGTGCCCCTGGCCGCAGGGGACGGGCTC
GAGGTTGTTCAAGAGGAGGTGGAGCGGCTGAGGCGCGCCTCCACATGGTGTCGGAACGTG
TGCACATTCCATGGTGCTGTGAGGGTGGGCGGCCACCTCTGTTTCGTGATGGATCGCTAT
GTGGGGTCTGTGCAGGCGGAGATGCGGCAGAATGGTGGACGCCTTACGCTGGAGCAGATT
CTCAGGTATGGAGCAGATATTGCTCGTGGAATAGCAGAACTCCATGCAGCGGGTATTGTT
TGTATGAGCATAAAGCCGTCAAACATTCTTTTGGATGCACATGGACATGCATTCGTTTCG
GATTACGGTCTTTCAGCAATTCTGAAGAACCTTACTAGTAGGAGAGTACCTGATGACTCC
AGTGCTGGCATTGATGCTACACTGCTTAGCCCCAATTATACAGCTCCTGAGGCATGGGGA
CCACTGAAGAAGTCACTGAATATGTTTTGGGATAGTGCAAACGGTATATCACCAGAGTCA
GATGCATGGAGTTTTGGTTGCACGCTTGTGGAAATGTGTACTGGTGCTGTTCCATGGGCT
GGACTGAGTGCAGAGGAAATATGTAAGTCTGTTGTAAAAGAAAAGAAGCCACCGCCTCAA
TATTCAAGAGTAGTAGGTGTAGGACTTCCTGGGGAGCTGTGGAAGATGATTGGTGAATGC
TTGCAATTCCGAGCTTCAAGAAGACCATCCTTCCAGGACATGCTGAAAACTTTTCTTCGG
CATCTTCTGGACATACCACGGAGCCCACCTGCTAGTCCCGAAATTGATTTTGCAAATGAA
AACTTGCCCAATGGCATGCAACCTCCAACAACCTCCATCTTAGAGATGGTTCATGATAAT
CCAAATGCCTTGCATCATCTTGTATGCGAAGGAGATGCTGCTGGTGTTAGGGATCTACTT
GCAAAAGCTGCATCAGAGAGAAACGATAGTTTAATCCGTTCTCTCTTAGAAGCACAAAAT
ACAGATGGGCTCACTGCCCTACATTTAGCATGCCGCCGAGGCTCGGCAGAGCTTGTGGAA
GCTATTGTTGCTTACCAAGAGAATGTAGATATATTAGATAAGGATGAAGACCCTCCTATA
GTATTTGCTTTGGCTGCTGGCTCTCCACGATGTGTTCGTGCACTTGTAGGCAGGTCTGCT
AGTATAAATTCTAGGCTTAGAGAAGGCCTGGGTCCTACTCTTGCCCATGTCTGTGCTCAT
CATGGTCAGCCGGAGTGCATGCAGGAGCTGCTGATGGCTGGAGCTGATCCTAACGCAGTA
GACGGGGAAGGTGAATCTGTGCTGCATATTGCCGTGGCCAGGAGATATACCGATTGTGCT
ATTGTTATACTGGAAAATGGAGGCTGCAGATCGATGGGCATATCAAATTCTCAACATAAA
ACGCCATTGCATTTATGTATTGAGACATGGAACACAGCTGTGGTAAGAAGATGGGTTGAA
GTTGCATCTTTAGAGGATATAGCAGAAACGATTGATGTACCCAGCCCTGTTGGTACAGCT
TTATGCATGGCAGCAGCTCTTAAAAAGGAGCATGAGAAAGAGGGTCGAGAGTTAGTAAGA
ATATTGCTTGCTGCTGGTGCTGATTCTACGGCACAAGATGATCCACACTGTAGAACTGCA
TTACATACTGCAGCAATGATCGATGATGTGGAGCTGGTTAAGATTATACTGGAAGCAGGA
GTTGATGTTAATATAAGAAATGCTCAAAATACAACCCCACTGCATGTTGCACTTAATAGA
GGTGCAAACTCATGTGTTGGCTTGCTTTTAGCAGCTGGTGCAAACTGCAACATACAGGAT
GATGATGGTGACAATGCTTTTCACATAGCTGCTGATGCAGCAAAAATGATACGTGAAAAC
CTGGCTTGGATTGCTCAAATGCTACTACAGCCGTCACCTGCTGTTGATGTGAGAAACCAC
CGAGGTTGGACACTACGAGACTTTCTTGAGAGGCTTCCACGAGAATGGATTTATGAAGAA
TTGATGGAAACACTTGAAGATAAAGGAGTCCATCTCTCACCAACCATTGGCAATCTCTTT
GATCGGTACCACCAAACTTCAAAGGATGGCTCAGCTGGCTGGGGAGCAAGGTTCTGCAGC
CCAAACCACATGAAAAAGGTGTTTGATGGTTTCCTCTTCCTGATCACACAACAAGCATTT
CTGGTGATGCCGCTGAGCAAGACAATCTGCAGTCCAGCACTTATCGTGCATGGTCAACCA
CATGAAAAAGCAATATTTCTTAGGAGCCAGGTTCTCCAAATAGGCTCCCATGAACTGAAT
AAAATGGCTCCTTTGAAGAAACTTCATATGCTGACTTTGCAGTGTCATCAGAGGAAGCAA
CAAGCCGCCATATGTGTTTATCTTCTGACTCAGGCTGCAAATGACTTGAAAAAAGGACGT
CCCGGAGATTTAAGAATTCCGCAAGAACTCCAACAGAAAGTGCACCTTTTAGTGCATGAG
CAAGTGGCCGGAAACGTTCTGTGTTCATGTTCTGGCCAGGGTTAG

Peptide Sequence

PEP ID

Zm00001d038106_P035
PEP Infomation

pep chromosome:B73_RefGen_v4:6:148086172:148099610:-1 gene:Zm00001d038106 transcript:Zm00001d038106_T035 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase KEG
Sequence

MRVPCCSLCNVRYDEEERTPLLLHCGHGFCRACLSRMLAAAPGATLPCPRCRHLTAVGNS
VSALRKNFPILSLLSTSPSSPSFLHSDSGSSSDGSEDEDDFFARPSRRPAPAPAAAPPGC
SFFDLASHPDLKLARRIGSGPPGPAGQEVWAGTLSRGGGVKRCKHQVAVKRVPLAAGDGL
EVVQEEVERLRRASTWCRNVCTFHGAVRVGGHLCFVMDRYVGSVQAEMRQNGGRLTLEQI
LRYGADIARGIAELHAAGIVCMSIKPSNILLDAHGHAFVSDYGLSAILKNLTSRRVPDDS
SAGIDATLLSPNYTAPEAWGPLKKSLNMFWDSANGISPESDAWSFGCTLVEMCTGAVPWA
GLSAEEICKSVVKEKKPPPQYSRVVGVGLPGELWKMIGECLQFRASRRPSFQDMLKTFLR
HLLDIPRSPPASPEIDFANENLPNGMQPPTTSILEMVHDNPNALHHLVCEGDAAGVRDLL
AKAASERNDSLIRSLLEAQNTDGLTALHLACRRGSAELVEAIVAYQENVDILDKDEDPPI
VFALAAGSPRCVRALVGRSASINSRLREGLGPTLAHVCAHHGQPECMQELLMAGADPNAV
DGEGESVLHIAVARRYTDCAIVILENGGCRSMGISNSQHKTPLHLCIETWNTAVVRRWVE
VASLEDIAETIDVPSPVGTALCMAAALKKEHEKEGRELVRILLAAGADSTAQDDPHCRTA
LHTAAMIDDVELVKIILEAGVDVNIRNAQNTTPLHVALNRGANSCVGLLLAAGANCNIQD
DDGDNAFHIAADAAKMIRENLAWIAQMLLQPSPAVDVRNHRGWTLRDFLERLPREWIYEE
LMETLEDKGVHLSPTIGNLFDRYHQTSKDGSAGWGARFCSPNHMKKVFDGFLFLITQQAF
LVMPLSKTICSPALIVHGQPHEKAIFLRSQVLQIGSHELNKMAPLKKLHMLTLQCHQRKQ
QAAICVYLLTQAANDLKKGRPGDLRIPQELQQKVHLLVHEQVAGNVLCSCSGQG

Transcript Sequence

Transcript ID

Zm00001d038106_T035
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:148086172:148099610:-1 gene:Zm00001d038106 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase KEG
Sequence

GGGTACCCATTGCCATTTCTAGCCGCACCCTCGTTGCAATTTGCAAGCGCACGAACCAGG
AAAAAAGTGGGCGGAGCGGGGAGAAGAGCAACGCGCGCTTTGCTTGTCGTCCTTCCGCAG
CCTCCCCAGTCCCCACCGGCCACCGGCATCAAGGCATCACCACCAATCTTTCGGAAGTTC
CCACGCTGCTCTGAGTGCTCTCTCGTCTCCCCTCCCCAAACCCCCACCCCGACGCCCAGA
TCTACCCTCCCCATTTACAGCTTCCTCTCCGGCCCCGCGCCCTAGGGCACGGCGTCGCCT
GAACCTGTCGGCGCCGGCGCGATGCGAGTACCATGCTGCTCGTTATGCAACGTCAGATAT
GACGAGGAGGAGCGGACGCCGCTGCTCCTCCACTGCGGACATGGATTCTGCCGCGCGTGC
CTCTCCCGCATGCTAGCGGCAGCCCCCGGAGCCACGCTGCCGTGCCCGCGATGCCGCCAT
CTGACCGCCGTAGGCAACTCGGTCTCTGCGCTGCGGAAGAACTTCCCCATTCTCTCTCTC
CTCTCCACATCCCCCTCATCCCCGTCTTTCCTCCACTCCGACTCGGGGTCATCCTCTGAC
GGCTCCGAAGACGAGGACGACTTCTTCGCGCGCCCCAGTCGCCGCCCCGCGCCCGCGCCC
GCTGCCGCACCGCCCGGATGCAGCTTCTTCGACCTCGCCTCGCACCCGGACCTCAAGCTC
GCCCGTCGCATCGGGAGCGGCCCGCCCGGGCCCGCCGGGCAGGAGGTGTGGGCCGGCACG
CTGTCTCGTGGCGGTGGGGTCAAGCGGTGCAAGCACCAGGTGGCAGTGAAGAGGGTGCCC
CTGGCCGCAGGGGACGGGCTCGAGGTTGTTCAAGAGGAGGTGGAGCGGCTGAGGCGCGCC
TCCACATGGTGTCGGAACGTGTGCACATTCCATGGTGCTGTGAGGGTGGGCGGCCACCTC
TGTTTCGTGATGGATCGCTATGTGGGGTCTGTGCAGGCGGAGATGCGGCAGAATGGTGGA
CGCCTTACGCTGGAGCAGATTCTCAGGTATGGAGCAGATATTGCTCGTGGAATAGCAGAA
CTCCATGCAGCGGGTATTGTTTGTATGAGCATAAAGCCGTCAAACATTCTTTTGGATGCA
CATGGACATGCATTCGTTTCGGATTACGGTCTTTCAGCAATTCTGAAGAACCTTACTAGT
AGGAGAGTACCTGATGACTCCAGTGCTGGCATTGATGCTACACTGCTTAGCCCCAATTAT
ACAGCTCCTGAGGCATGGGGACCACTGAAGAAGTCACTGAATATGTTTTGGGATAGTGCA
AACGGTATATCACCAGAGTCAGATGCATGGAGTTTTGGTTGCACGCTTGTGGAAATGTGT
ACTGGTGCTGTTCCATGGGCTGGACTGAGTGCAGAGGAAATATGTAAGTCTGTTGTAAAA
GAAAAGAAGCCACCGCCTCAATATTCAAGAGTAGTAGGTGTAGGACTTCCTGGGGAGCTG
TGGAAGATGATTGGTGAATGCTTGCAATTCCGAGCTTCAAGAAGACCATCCTTCCAGGAC
ATGCTGAAAACTTTTCTTCGGCATCTTCTGGACATACCACGGAGCCCACCTGCTAGTCCC
GAAATTGATTTTGCAAATGAAAACTTGCCCAATGGCATGCAACCTCCAACAACCTCCATC
TTAGAGATGGTTCATGATAATCCAAATGCCTTGCATCATCTTGTATGCGAAGGAGATGCT
GCTGGTGTTAGGGATCTACTTGCAAAAGCTGCATCAGAGAGAAACGATAGTTTAATCCGT
TCTCTCTTAGAAGCACAAAATACAGATGGGCTCACTGCCCTACATTTAGCATGCCGCCGA
GGCTCGGCAGAGCTTGTGGAAGCTATTGTTGCTTACCAAGAGAATGTAGATATATTAGAT
AAGGATGAAGACCCTCCTATAGTATTTGCTTTGGCTGCTGGCTCTCCACGATGTGTTCGT
GCACTTGTAGGCAGGTCTGCTAGTATAAATTCTAGGCTTAGAGAAGGCCTGGGTCCTACT
CTTGCCCATGTCTGTGCTCATCATGGTCAGCCGGAGTGCATGCAGGAGCTGCTGATGGCT
GGAGCTGATCCTAACGCAGTAGACGGGGAAGGTGAATCTGTGCTGCATATTGCCGTGGCC
AGGAGATATACCGATTGTGCTATTGTTATACTGGAAAATGGAGGCTGCAGATCGATGGGC
ATATCAAATTCTCAACATAAAACGCCATTGCATTTATGTATTGAGACATGGAACACAGCT
GTGGTAAGAAGATGGGTTGAAGTTGCATCTTTAGAGGATATAGCAGAAACGATTGATGTA
CCCAGCCCTGTTGGTACAGCTTTATGCATGGCAGCAGCTCTTAAAAAGGAGCATGAGAAA
GAGGGTCGAGAGTTAGTAAGAATATTGCTTGCTGCTGGTGCTGATTCTACGGCACAAGAT
GATCCACACTGTAGAACTGCATTACATACTGCAGCAATGATCGATGATGTGGAGCTGGTT
AAGATTATACTGGAAGCAGGAGTTGATGTTAATATAAGAAATGCTCAAAATACAACCCCA
CTGCATGTTGCACTTAATAGAGGTGCAAACTCATGTGTTGGCTTGCTTTTAGCAGCTGGT
GCAAACTGCAACATACAGGATGATGATGGTGACAATGCTTTTCACATAGCTGCTGATGCA
GCAAAAATGATACGTGAAAACCTGGCTTGGATTGCTCAAATGCTACTACAGCCGTCACCT
GCTGTTGATGTGAGAAACCACCGAGGTTGGACACTACGAGACTTTCTTGAGAGGCTTCCA
CGAGAATGGATTTATGAAGAATTGATGGAAACACTTGAAGATAAAGGAGTCCATCTCTCA
CCAACCATTGGCAATCTCTTTGATCGGTACCACCAAACTTCAAAGGATGGCTCAGCTGGC
TGGGGAGCAAGGTTCTGCAGCCCAAACCACATGAAAAAGGTGTTTGATGGTTTCCTCTTC
CTGATCACACAACAAGCATTTCTGGTGATGCCGCTGAGCAAGACAATCTGCAGTCCAGCA
CTTATCGTGCATGGTCAACCACATGAAAAAGCAATATTTCTTAGGAGCCAGGTTCTCCAA
ATAGGCTCCCATGAACTGAATAAAATGGCTCCTTTGAAGAAACTTCATATGCTGACTTTG
CAGTGTCATCAGAGGAAGCAACAAGCCGCCATATGTGTTTATCTTCTGACTCAGGCTGCA
AATGACTTGAAAAAAGGACGTCCCGGAGATTTAAGAATTCCGCAAGAACTCCAACAGAAA
GTGCACCTTTTAGTGCATGAGCAAGTGGCCGGAAACGTTCTGTGTTCATGTTCTGGCCAG
GGTTAGCTTGTGCATCAATGCATGGATGTGTTAGTCACATGCACCTAGAGTTAGCTTGTT
AGTTTGTGCTACTATGAATCATCAGGGAATAAGCCAAGTATGTTGAGAAGCTAGTAGCTG
CATGCATTGCAAGAGCACGATTTAGGAGCAGTGTGGGTTGGTTGGTGGAGCACTTCATGT
AGATTTAAGACTTGTAGTGCATGAGTCTGCAGCTCGTACAGAAGTGGATGGCATGCATGC
TTGCGTGTGCATGGCTTGAGACCCGACCGAGTTGTTGCTGAACAGGGTGTGCCAGCTGGG
ATTTAAAGCCATGTACTCTGGTTTTTTTTCATGTGAGTTGAATACATAAAAGTCAAAAGG
AGGTATTTGTCG