Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d038093_T009
CDS Infomation	cds chromosome:B73_RefGen_v4:6:147577095:147627637:1 gene:Zm00001d038093 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cleavage stimulation factor subunit 77
Sequence	ATGGCCACCAACAACGATGAAGCCGCCAAGCAGATTTTCAGCAGATGCCTGCTCAACTGC CTTCACATTAGTCTATGGCGCTGTTACATCAACTTTATCAGGAGAATTAACGATAAAAGG GGCTCTGAGGGTCTTGATGAGACGAAGAAGGCTTTTGATTTCATGCTCAACTACGTTGGG AATGATGCAGCTTCTGGCCCTGTTTGGATGGAGTATATTAATTTCCTCAAGTCCATGCCG GTTGTGACGCCCCATGAAGAGTCGCATCGCATGACTACTGTTCGTAAAGTGTACCAGAAG GCAATTTTAGTTCCAACTAATCATGTAGAGCAGTTGTGGAAGGATTACGAGAACTTCGAA AATTCTGTTAGCCGCACCTTGGCAAAAGGCTTGTTATCTGAATACCAACCAAAGTTTAAC AGTGCTAAGGCTGTATATAGAGAGCGAAAAAAGTACATTGATGATATTGATTGGAATGTA CTGGCCACCCCCCCTACAGGCTCGTACAAGGAAGAGCAACAGTGTATGGCATGGAAAAGA CTCTTGGTATTTGAAAAGGGGAACCCTCAAAGAATTGATGCTACAACAGCTAATAGGCGT ATCACCTTTACTTATGAGCAATGCCTGATGTATCTATATCATCATCCTGATATATGGTAC GATTATGCTATGTGGCATGTGAAGAATGGTTCTATGGATTCTGCATCAAAAATATTTCAG CGAGCTCTAAAAGCAATCCATGATTCTGAAGTACTTAAGTATGCCTTTGCTGAAATGGAA GAGTCCAGAGGGGCGATACAGACTGCTAAGACAGTATACGAATCTCTTCTAGGTGAAAAT GCTAGTGAGACCTCACTTGCAAATATTCAGTTTATTCGATTTCTAAGGAGAACTGAAGGC ACTGAAGCAGCCCGTAAGTACTTTTTGGATGCTCGGAAGTCACCAAGCTGCACTTATCAT TTGTATGTTGCTTATGCTACAATGGCATTCTGCGTTGACAAGGATGCAAAGGTGGCACAA AGTGTTTTTGAAGCAGGTTTAAAGAGGTTTATGCATGAGCCAGGATATATCCTTGAATAC ACAGACTTCTTGTGTCGTTTAAATGACGATAGAAATGTACGTGCTTTGTTTGAGAGGGCA CTGAGCTTACTTCCTCCCGAGGAATCCACAGAGGTTGAACAAAGAAGGAAAGAGGCTCTA TCTAGGACATCTGAAGATGCCTTATCTGCATCGGAAAACACACTTCATGACATAGTTTCT CGATACAGTTACATGGATCTTTGGCCATGCTCATCAAAAGAATTGGATTATCTAGCGAGA CAAGAGTGGCTTGCGAAAAACATTGTTAAGAAGGTTGAGAAACCAGCTATGTTAAATAGC GGTAGCATGCTAGACAAAGGTGCTGCAGGATTTAGTGCGAGTGCGAGGTTATTACCACAA TCTGCCAAAGTTGTTCGTCCTGAGACTTCTCAAATGGTTATTTATGATCCAAGACAGATG AAAGGCCCAGAGTTTGCAGCAACTAGCAGTGGGTACACGAAGGAGGTTGAAGCCACGCTC AAAGTGCTATCGCCGTCGATGGTGTCCTTTATTAAGAATTTGCCTGCTATTGAAGGACCA TCGCCGGATATCGATGTGGTGCTCAGCGTGCTGCTGCAGAGCACATTGCCAGTTGCACAG AGTGCTGGGAAAGCAGGTGGCGTGAGTGAGCTCTCAGGCGTTGGAAAAACGGGACTGAAC CAGAATGGATCTGTCCATAGACCTCCAAGGGAGAGAAGGAAGGACGTGGAGAGGCAAGGG GCGCAGGAGGAAGAGGATGCGTCGGCGGTGCAGAGCAGGGCAGCTGTGCCACGAGACATC TTCAGGCTTCGGCAGATTCAGAGGAGCCGTGGCCTGGGTGTGGGTGGTGCCGCCGTTTCG CAGTCTGGGTCCTCGGCATTTTCTTTCTCGGGCGGTGGAAGCGCCTTCTCTGGGGACCAC TCAGCTAGCACAGATTAG

Peptide Sequence

PEP ID	Zm00001d038093_P009
PEP Infomation	pep chromosome:B73_RefGen_v4:6:147577095:147627637:1 gene:Zm00001d038093 transcript:Zm00001d038093_T009 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cleavage stimulation factor subunit 77
Sequence	MATNNDEAAKQIFSRCLLNCLHISLWRCYINFIRRINDKRGSEGLDETKKAFDFMLNYVG NDAASGPVWMEYINFLKSMPVVTPHEESHRMTTVRKVYQKAILVPTNHVEQLWKDYENFE NSVSRTLAKGLLSEYQPKFNSAKAVYRERKKYIDDIDWNVLATPPTGSYKEEQQCMAWKR LLVFEKGNPQRIDATTANRRITFTYEQCLMYLYHHPDIWYDYAMWHVKNGSMDSASKIFQ RALKAIHDSEVLKYAFAEMEESRGAIQTAKTVYESLLGENASETSLANIQFIRFLRRTEG TEAARKYFLDARKSPSCTYHLYVAYATMAFCVDKDAKVAQSVFEAGLKRFMHEPGYILEY TDFLCRLNDDRNVRALFERALSLLPPEESTEVEQRRKEALSRTSEDALSASENTLHDIVS RYSYMDLWPCSSKELDYLARQEWLAKNIVKKVEKPAMLNSGSMLDKGAAGFSASARLLPQ SAKVVRPETSQMVIYDPRQMKGPEFAATSSGYTKEVEATLKVLSPSMVSFIKNLPAIEGP SPDIDVVLSVLLQSTLPVAQSAGKAGGVSELSGVGKTGLNQNGSVHRPPRERRKDVERQG AQEEEDASAVQSRAAVPRDIFRLRQIQRSRGLGVGGAAVSQSGSSAFSFSGGGSAFSGDH SASTD

Transcript Sequence

Transcript ID	Zm00001d038093_T009
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:147577095:147627637:1 gene:Zm00001d038093 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cleavage stimulation factor subunit 77
Sequence	CAGCTCAACAAAGATAACCTTGCGCCGCCTCCTAAGAAGTATGTACTTTTAAAAGAATAC AACCAGAGTTGTATATACTATTCAATTCTGCAGAATTCCGGAGGAGGCGCCGCCCATGGC GATGGCGGCGACATCTACAATGTCCGGGCCGCCGAGATCCTCGCCAACGAGGCCCTCCTG CTCCCCATCAATGAGGCCGCCCCAATCTACGAGAATCTGCTCGCCACTTTCCCCACGGCC GCCAAATACTGGAAGCAGTATGTCGAAGCCTACATGGCCACCAACAACGATGAAGCCGCC AAGCAGATTTTCAGCAGATGCCTGCTCAACTGCCTTCACATTAGTCTATGGCGCTGTTAC ATCAACTTTATCAGGAGAATTAACGATAAAAGGGGCTCTGAGGGTCTTGATGAGACGAAG AAGGCTTTTGATTTCATGCTCAACTACGTTGGGAATGATGCAGCTTCTGGCCCTGTTTGG ATGGAGTATATTAATTTCCTCAAGTCCATGCCGGTTGTGACGCCCCATGAAGAGTCGCAT CGCATGACTACTGTTCGTAAAGTGTACCAGAAGGCAATTTTAGTTCCAACTAATCATGTA GAGCAGTTGTGGAAGGATTACGAGAACTTCGAAAATTCTGTTAGCCGCACCTTGGCAAAA GGCTTGTTATCTGAATACCAACCAAAGTTTAACAGTGCTAAGGCTGTATATAGAGAGCGA AAAAAGTACATTGATGATATTGATTGGAATGTACTGGCCACCCCCCCTACAGGCTCGTAC AAGGAAGAGCAACAGTGTATGGCATGGAAAAGACTCTTGGTATTTGAAAAGGGGAACCCT CAAAGAATTGATGCTACAACAGCTAATAGGCGTATCACCTTTACTTATGAGCAATGCCTG ATGTATCTATATCATCATCCTGATATATGGTACGATTATGCTATGTGGCATGTGAAGAAT GGTTCTATGGATTCTGCATCAAAAATATTTCAGCGAGCTCTAAAAGCAATCCATGATTCT GAAGTACTTAAGTATGCCTTTGCTGAAATGGAAGAGTCCAGAGGGGCGATACAGACTGCT AAGACAGTATACGAATCTCTTCTAGGTGAAAATGCTAGTGAGACCTCACTTGCAAATATT CAGTTTATTCGATTTCTAAGGAGAACTGAAGGCACTGAAGCAGCCCGTAAGTACTTTTTG GATGCTCGGAAGTCACCAAGCTGCACTTATCATTTGTATGTTGCTTATGCTACAATGGCA TTCTGCGTTGACAAGGATGCAAAGGTGGCACAAAGTGTTTTTGAAGCAGGTTTAAAGAGG TTTATGCATGAGCCAGGATATATCCTTGAATACACAGACTTCTTGTGTCGTTTAAATGAC GATAGAAATGTACGTGCTTTGTTTGAGAGGGCACTGAGCTTACTTCCTCCCGAGGAATCC ACAGAGGTTGAACAAAGAAGGAAAGAGGCTCTATCTAGGACATCTGAAGATGCCTTATCT GCATCGGAAAACACACTTCATGACATAGTTTCTCGATACAGTTACATGGATCTTTGGCCA TGCTCATCAAAAGAATTGGATTATCTAGCGAGACAAGAGTGGCTTGCGAAAAACATTGTT AAGAAGGTTGAGAAACCAGCTATGTTAAATAGCGGTAGCATGCTAGACAAAGGTGCTGCA GGATTTAGTGCGAGTGCGAGGTTATTACCACAATCTGCCAAAGTTGTTCGTCCTGAGACT TCTCAAATGGTTATTTATGATCCAAGACAGATGAAAGGCCCAGAGTTTGCAGCAACTAGC AGTGGGTACACGAAGGAGGTTGAAGCCACGCTCAAAGTGCTATCGCCGTCGATGGTGTCC TTTATTAAGAATTTGCCTGCTATTGAAGGACCATCGCCGGATATCGATGTGGTGCTCAGC GTGCTGCTGCAGAGCACATTGCCAGTTGCACAGAGTGCTGGGAAAGCAGGTGGCGTGAGT GAGCTCTCAGGCGTTGGAAAAACGGGACTGAACCAGAATGGATCTGTCCATAGACCTCCA AGGGAGAGAAGGAAGGACGTGGAGAGGCAAGGGGCGCAGGAGGAAGAGGATGCGTCGGCG GTGCAGAGCAGGGCAGCTGTGCCACGAGACATCTTCAGGCTTCGGCAGATTCAGAGGAGC CGTGGCCTGGGTGTGGGTGGTGCCGCCGTTTCGCAGTCTGGGTCCTCGGCATTTTCTTTC TCGGGCGGTGGAAGCGCCTTCTCTGGGGACCACTCAGCTAGCACAGATTAGCCTACTCAC CAGACATGTTCAACAGCTCAGCTCAAAGCTCAACTGCGAGTAGTGAGCTCAAAGGCTACC TCCAGCAGATTTATATCACATTCCTTTTCTCATCCCCTATTTCAAACATCACTTTGCAAA CAATATCATCTATAGTTTCATGTCCCCTATTTTACACTACATGCTGGAGACAGTCTAAGG ACATAATGACATACTAGTAGGGTGCCCGTGCGTTGCTACGGCAACTTAAAAATTGATACA AAACAATAACGCAATATAATTACAATCTTTGATTG