Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d038022_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:6:145415188:145419374:-1 gene:Zm00001d038022 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein chloroplastic
Sequence	ATGGCGCTCTCTTCCCACGCCACCACCGCTGCTGCGGCGGCGGCCGTCGGCACCTTTCCC CAATCCACTCGCTCCTCTTCCCGGCGATTCCCCGCGTCGTCTGTCTCCCCCCGCCCCCCG CCGCCCCCGCGCTCCCTACGCCTCGACCATGCCGTGGCGCCGTCCCTCTCCCCCGCCACC ATGCCCGCGCCCGACGGTCTCCTCGCTGCAGCCATCGAACACCTGGAGCGCGAGCCAGCA TCCGTCGCAGCCGACGAGGCTCCGCTCGCGGCGCTGTCCCCGCGGGAGCTGCAGCTGGTG CTCGTCTACTTCGCGCAGGAGGGGCGCGACACCTACTGCGCGCTCGAGGTCTTTGACTGG CTCCGGCGCGCCAACCGCGTCGACGGGGAGACCATGGAGCTCATGGCCGCCATCGCCTGC GGCTGGATCGAGCGCCTCGTGGGGGCCGGCGGGGACGTCGCCGACGTTGCTGCGCTGCTC GGGGAGATGGACTGCGTCGGGCTGCGGCCCGGGTTCAGCCTCGTGGAGAAGGCCGTCGCG CTCTACTGGGACCGCGGGGAGAAGGAGCTAGCTGTCGAGTTTGTCAGAGACGTGCTCAGG AGAGGGGGACTCGGAGCCGGCGCGGGAGGGGAGCACAGCTCTGCCAGTGGCGATGGTGAG CGGGGAGGGCCCGTTGGCTACCTCGCCTGGAAGATGATGATGGATGGAGACTATCGGAAT GCTGTCAAATTGGTCATTGAATTTAAGGAGACCGGTCTCAAACCTGAGGTGTATAGCTAT CTCATTGGCTTGACTGCCTTGGTTAAAGAGCAAAAAGAATTCTCAAAGGCTCTGCGAAGA TTAAATGCATCGGTGAAGGATGGCTCAATTTCTAAACTGGATGCTGAGAGCATGCATAGT ATCAACAAGTATCAATCGGATTTGTTAAGTGATGGTGTTCTTTTATCGAACTGGGTAGTA CAAGAGGGCAGCAGCGAAGTTCTAGGACTTGTGCGTGAGAGGCTCCTATCATTGTATACT TGTGCTGGTTGTGGCTTGGAAGCTGAGCACCAACTTTGGGAAATGAAGCTTCTTGGCCGA GAACCTGATACACAGCTCTATGATGTTGTATTGGCAATTTGTGCTTCTCAAGGGGAAGCT GCTGCTGTTCGCCGCTTGCTTGCAGGAGTCGAGTCAACCAGCGCCGGAAGAAGGAAGAAG TCTATGTCATGGCTACTGCGAGGCTATGTCAAAGGTGGCTTCATTCTAGACGCCTCAGAA ACACTCATTCAGATGCTGGACATGGGCTTGCTTCCTGATTACCTGGATAGAGCTGCTGTA CTGACTGCACTGCGGAGGAACATACAGGAATCCGGCAGCCTAGAGTCCTACTTGAAGCTT TGCAAGCGACTATCTGAGACAGATCTGATTGGACCATGTATTGTGTATCTATATGTCCGC AAATTCAAATTGTGGATGGCACACATGCTTTAG

Peptide Sequence

PEP ID	Zm00001d038022_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:6:145415188:145419374:-1 gene:Zm00001d038022 transcript:Zm00001d038022_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein chloroplastic
Sequence	MALSSHATTAAAAAAVGTFPQSTRSSSRRFPASSVSPRPPPPPRSLRLDHAVAPSLSPAT MPAPDGLLAAAIEHLEREPASVAADEAPLAALSPRELQLVLVYFAQEGRDTYCALEVFDW LRRANRVDGETMELMAAIACGWIERLVGAGGDVADVAALLGEMDCVGLRPGFSLVEKAVA LYWDRGEKELAVEFVRDVLRRGGLGAGAGGEHSSASGDGERGGPVGYLAWKMMMDGDYRN AVKLVIEFKETGLKPEVYSYLIGLTALVKEQKEFSKALRRLNASVKDGSISKLDAESMHS INKYQSDLLSDGVLLSNWVVQEGSSEVLGLVRERLLSLYTCAGCGLEAEHQLWEMKLLGR EPDTQLYDVVLAICASQGEAAAVRRLLAGVESTSAGRRKKSMSWLLRGYVKGGFILDASE TLIQMLDMGLLPDYLDRAAVLTALRRNIQESGSLESYLKLCKRLSETDLIGPCIVYLYVR KFKLWMAHML

Transcript Sequence

Transcript ID	Zm00001d038022_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:145415188:145419374:-1 gene:Zm00001d038022 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein chloroplastic
Sequence	ACTCATCTGCCCTTCCTCTCCCCCGCCCCAGTCGCCGTCGGCATTCAGCCCTCCCTTCCT TGGCTTGGGCCACGTCGCCCCTTCTCCTCCCCACACATCCATACTGAAGCCTCAAAATCC TCCGCCTCACTCCCATCCCATGCCCTCCTCTCAACCCTAGTCCTTCCCCATCCCTTACTC ATGGCGCTCTCTTCCCACGCCACCACCGCTGCTGCGGCGGCGGCCGTCGGCACCTTTCCC CAATCCACTCGCTCCTCTTCCCGGCGATTCCCCGCGTCGTCTGTCTCCCCCCGCCCCCCG CCGCCCCCGCGCTCCCTACGCCTCGACCATGCCGTGGCGCCGTCCCTCTCCCCCGCCACC ATGCCCGCGCCCGACGGTCTCCTCGCTGCAGCCATCGAACACCTGGAGCGCGAGCCAGCA TCCGTCGCAGCCGACGAGGCTCCGCTCGCGGCGCTGTCCCCGCGGGAGCTGCAGCTGGTG CTCGTCTACTTCGCGCAGGAGGGGCGCGACACCTACTGCGCGCTCGAGGTCTTTGACTGG CTCCGGCGCGCCAACCGCGTCGACGGGGAGACCATGGAGCTCATGGCCGCCATCGCCTGC GGCTGGATCGAGCGCCTCGTGGGGGCCGGCGGGGACGTCGCCGACGTTGCTGCGCTGCTC GGGGAGATGGACTGCGTCGGGCTGCGGCCCGGGTTCAGCCTCGTGGAGAAGGCCGTCGCG CTCTACTGGGACCGCGGGGAGAAGGAGCTAGCTGTCGAGTTTGTCAGAGACGTGCTCAGG AGAGGGGGACTCGGAGCCGGCGCGGGAGGGGAGCACAGCTCTGCCAGTGGCGATGGTGAG CGGGGAGGGCCCGTTGGCTACCTCGCCTGGAAGATGATGATGGATGGAGACTATCGGAAT GCTGTCAAATTGGTCATTGAATTTAAGGAGACCGGTCTCAAACCTGAGGTGTATAGCTAT CTCATTGGCTTGACTGCCTTGGTTAAAGAGCAAAAAGAATTCTCAAAGGCTCTGCGAAGA TTAAATGCATCGGTGAAGGATGGCTCAATTTCTAAACTGGATGCTGAGAGCATGCATAGT ATCAACAAGTATCAATCGGATTTGTTAAGTGATGGTGTTCTTTTATCGAACTGGGTAGTA CAAGAGGGCAGCAGCGAAGTTCTAGGACTTGTGCGTGAGAGGCTCCTATCATTGTATACT TGTGCTGGTTGTGGCTTGGAAGCTGAGCACCAACTTTGGGAAATGAAGCTTCTTGGCCGA GAACCTGATACACAGCTCTATGATGTTGTATTGGCAATTTGTGCTTCTCAAGGGGAAGCT GCTGCTGTTCGCCGCTTGCTTGCAGGAGTCGAGTCAACCAGCGCCGGAAGAAGGAAGAAG TCTATGTCATGGCTACTGCGAGGCTATGTCAAAGGTGGCTTCATTCTAGACGCCTCAGAA ACACTCATTCAGATGCTGGACATGGGCTTGCTTCCTGATTACCTGGATAGAGCTGCTGTA CTGACTGCACTGCGGAGGAACATACAGGAATCCGGCAGCCTAGAGTCCTACTTGAAGCTT TGCAAGCGACTATCTGAGACAGATCTGATTGGACCATGTATTGTGTATCTATATGTCCGC AAATTCAAATTGTGGATGGCACACATGCTTTAGAGTTCTGATGAACCCTTTCGTCATATA TCCACTCATGGCAGGTACAAAATGGAGATCTCTAAAAAATGTGTGTGGCTCAAACGCTTG TCCCTGATGAACAAGACATAGAAGCTTCAATTTCGGTGAACCGGTTGGTACATAATAATG GTTCCTTGTATATTTTTGACCGAAGTAGAGGTATCAACTGGTTGTTTGTTGTAAACAGCG CTGTTGTAGTACTCTGAACAGAGTCCATATCGTACATGTAAATTCTCTGTGTCACTGTTC TCATATGCAGTTGCTGTTGAAATCTGTGCGTTACTGCAGCCTGTAGGGGATAGGCAAAAT GGAAACTTTTGTTGATATAAATATAATGTACAGTTCTGTCGTGACTGAACTTCTAAAGTT GTACCGAGATGAACTTCTAAAGTTGTACCGAGATTACACGATACATCTCTGTTT