Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d038007_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:6:145000655:145009587:1 gene:Zm00001d038007 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sorting nexin 2B
Sequence

ATGATGTCCTCGACGCCGCTGTCGCAGCCGGCCACCGCCGGCGACGACGACGACGATATG
GAGTCCCTCCCCCTTGCCGCCGCCTCCGACTACGCCTCAGTCGCCTCCACCTTTGACCCC
CTCTTCTCCTCCACCTCCGCCACCGCCACCTCGCCCCGCTCCCCTCCCACGCGCGCCGCC
GCTTTCACCCTCTCCCCGACCTTTTCCTCCTCCTTCGTTGACCCGCCCTCCTACGCCGAC
GCCACCGGCGCCGGCGCCGGCGCCGTCTCCTCCTCCCCGTGCTCCGCCTCCTCACCCTCC
TCCGCGTCGCCGAGATCCGCGCGCGTGGCGGCCTCCGAGTACTCCTTCCTCGCCGTCTCC
GACCCGGAGACTGAAGCAGAGCCTGCCGCCACCTCGCTCGTCCCCGGATCCGCGCCCACC
TACGTCTCCTACCTCGTCACCAGCGTCCGCCGCGGGGACCCCGACCAGCGCCGCCATTCC
GTGCGCCGCCGCTTCCGCGACTTCGTCACGCTTGCAGACCGCCTCGCCGACGCCTTCCGG
GGCCATTTCGTGCCGCCGCGCCCGGACAAGAACACCGTCGAGAGCCAGGTCATGCAGCGG
GACGAGTTCGTGGCTCAGCGCCGTGCTGCGCTCGAGCGGTATCTCTGGCGACTCGCCGAG
CACCCGGCCATCGGCCCCAGCGACGAGCTGCGCGTCTTTCTGCAGGCCGAGGGCAAGATG
CCACTGCCCGGCACCACTGATATGGCATCGCGGATGCTGGATGGTGCAGCAAGGCTGCCG
CGGCAGCTCATTGCTGGGGAAGATACCGTCACCGCACCACAGGAAGTCGTGCAGCCTGCC
AAGGGCGGCAGGGACCTGCTTAGGATATTCAAGGAGCTCAAGCAGTCGGTGGTAACTGAC
TGGGCTGGTGTCAAGCCACCCTTGGTAGAGGAGGATAGGGAGTTCCTGGAGAAGAAAGAG
AAGCTGCAGGAGTGGGAACAGCAGCTCACCAGTGCGTCACAACAGGCAGAAGCACTTGTC
AAGGCTCAACAAGATATGGCTGAAACAATGGGAGCGCTTGGGTTGGCATTCGTTAGACTA
ACAAAGTTTGAAACCGAGGAGGCAATGTATGACTCTCAGAGGATGAGAGCAGCTGACAGC
AGGCGTGTAGCCACTGCAGCTGTTAAAGCTAGCAGGGCATGTCGAGACTTGAATGCGCAA
ACTGTTAAATATCTGGATACGCTGCATGAACATTTAAGCATAATGTTGTCTGTCCGCACT
GCATTTTCTGATCGGGCAAGTGCATTATTGACTGTGCAAACACTTATGTCGGATTTGGCA
TCATTAGAGTCCAGGATCGAGAAACTCGAGGCTGCATCCTTGAAGATATTTGGTGGTGAT
AAAGCTAGGACTCGCAAAGTTGAAGAGCTAAGGGAAACAATTAGGGCTACTGAAGATGCT
AAGTTCTGCGCTTTAAGAGAGTACGAGAGAATTAAGGCGGCCTACGCGGACAAAATCGTG
GATGGATGGGAGACGGTAGCGGAGGAGACGAGCGGTTATGTTGGTGTGCGTGGATCTGAT
AGCATGACTTCGTAG

Peptide Sequence

PEP ID

Zm00001d038007_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:6:145000655:145009587:1 gene:Zm00001d038007 transcript:Zm00001d038007_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sorting nexin 2B
Sequence

MMSSTPLSQPATAGDDDDDMESLPLAAASDYASVASTFDPLFSSTSATATSPRSPPTRAA
AFTLSPTFSSSFVDPPSYADATGAGAGAVSSSPCSASSPSSASPRSARVAASEYSFLAVS
DPETEAEPAATSLVPGSAPTYVSYLVTSVRRGDPDQRRHSVRRRFRDFVTLADRLADAFR
GHFVPPRPDKNTVESQVMQRDEFVAQRRAALERYLWRLAEHPAIGPSDELRVFLQAEGKM
PLPGTTDMASRMLDGAARLPRQLIAGEDTVTAPQEVVQPAKGGRDLLRIFKELKQSVVTD
WAGVKPPLVEEDREFLEKKEKLQEWEQQLTSASQQAEALVKAQQDMAETMGALGLAFVRL
TKFETEEAMYDSQRMRAADSRRVATAAVKASRACRDLNAQTVKYLDTLHEHLSIMLSVRT
AFSDRASALLTVQTLMSDLASLESRIEKLEAASLKIFGGDKARTRKVEELRETIRATEDA
KFCALREYERIKAAYADKIVDGWETVAEETSGYVGVRGSDSMTS

Transcript Sequence

Transcript ID

Zm00001d038007_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:145000655:145009587:1 gene:Zm00001d038007 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sorting nexin 2B
Sequence

GTATTCGCCGCTCACCACACCCATCTGCCCTCCCGGTTTCCCTTTCCCCCCTCCTCCTCC
TCAGCGTCATGATGTCCTCGACGCCGCTGTCGCAGCCGGCCACCGCCGGCGACGACGACG
ACGATATGGAGTCCCTCCCCCTTGCCGCCGCCTCCGACTACGCCTCAGTCGCCTCCACCT
TTGACCCCCTCTTCTCCTCCACCTCCGCCACCGCCACCTCGCCCCGCTCCCCTCCCACGC
GCGCCGCCGCTTTCACCCTCTCCCCGACCTTTTCCTCCTCCTTCGTTGACCCGCCCTCCT
ACGCCGACGCCACCGGCGCCGGCGCCGGCGCCGTCTCCTCCTCCCCGTGCTCCGCCTCCT
CACCCTCCTCCGCGTCGCCGAGATCCGCGCGCGTGGCGGCCTCCGAGTACTCCTTCCTCG
CCGTCTCCGACCCGGAGACTGAAGCAGAGCCTGCCGCCACCTCGCTCGTCCCCGGATCCG
CGCCCACCTACGTCTCCTACCTCGTCACCAGCGTCCGCCGCGGGGACCCCGACCAGCGCC
GCCATTCCGTGCGCCGCCGCTTCCGCGACTTCGTCACGCTTGCAGACCGCCTCGCCGACG
CCTTCCGGGGCCATTTCGTGCCGCCGCGCCCGGACAAGAACACCGTCGAGAGCCAGGTCA
TGCAGCGGGACGAGTTCGTGGCTCAGCGCCGTGCTGCGCTCGAGCGGTATCTCTGGCGAC
TCGCCGAGCACCCGGCCATCGGCCCCAGCGACGAGCTGCGCGTCTTTCTGCAGGCCGAGG
GCAAGATGCCACTGCCCGGCACCACTGATATGGCATCGCGGATGCTGGATGGTGCAGCAA
GGCTGCCGCGGCAGCTCATTGCTGGGGAAGATACCGTCACCGCACCACAGGAAGTCGTGC
AGCCTGCCAAGGGCGGCAGGGACCTGCTTAGGATATTCAAGGAGCTCAAGCAGTCGGTGG
TAACTGACTGGGCTGGTGTCAAGCCACCCTTGGTAGAGGAGGATAGGGAGTTCCTGGAGA
AGAAAGAGAAGCTGCAGGAGTGGGAACAGCAGCTCACCAGTGCGTCACAACAGGCAGAAG
CACTTGTCAAGGCTCAACAAGATATGGCTGAAACAATGGGAGCGCTTGGGTTGGCATTCG
TTAGACTAACAAAGTTTGAAACCGAGGAGGCAATGTATGACTCTCAGAGGATGAGAGCAG
CTGACAGCAGGCGTGTAGCCACTGCAGCTGTTAAAGCTAGCAGGGCATGTCGAGACTTGA
ATGCGCAAACTGTTAAATATCTGGATACGCTGCATGAACATTTAAGCATAATGTTGTCTG
TCCGCACTGCATTTTCTGATCGGGCAAGTGCATTATTGACTGTGCAAACACTTATGTCGG
ATTTGGCATCATTAGAGTCCAGGATCGAGAAACTCGAGGCTGCATCCTTGAAGATATTTG
GTGGTGATAAAGCTAGGACTCGCAAAGTTGAAGAGCTAAGGGAAACAATTAGGGCTACTG
AAGATGCTAAGTTCTGCGCTTTAAGAGAGTACGAGAGAATTAAGGCGGCCTACGCGGACA
AAATCGTGGATGGATGGGAGACGGTAGCGGAGGAGACGAGCGGTTATGTTGGTGTGCGTG
GATCTGATAGCATGACTTCGTAGCTTCGTTTGGTTGGATGTCAAGTGTTTGTACAATGTA
ATCTAGGTTATGGATTTGGGAATAGAAGAAAGGTGCGCCAGGTTCGATTTGTTTGTATAA
TCAAATAAAGGTACTGCCATGGAGCCACGATTTCACGTCCTGGATGT