Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d038004_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:6:144866036:144869120:-1 gene:Zm00001d038004 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein 4B1
Sequence

ATGGCCGACGTCGAGAAGGCCACCCCCGTGGCCGCACCGGCCGAGGGCGCGGGCGGCGAC
GTGGCCGCCGGGAGAACCGGCGCGGTGGCCGCCCTGCTGCGGCGGTGGCGGACCCAGGAC
CTGCTGGACCGGTCGGGGTCCGCGCTGCGCGCCGCGGCGTGGGCGTTCTCCCTGCTGGCG
TTCCTCGTCATGGCCTGCAACGAGCATGGGGACTGGAGGCAGTTCGACCGCTACGAGGAG
TACAGGTACATCGTTGCCATCGGCCTGCTGGCCTTCGTCTACACGACGCTGCAGCTCCTC
CGGCACGGCGTCCGCCTCACCGGCGGCCAGGACCTGGAGCCCAAGACCGGCCTCCTCGTT
GACTTCGCCGGGGATCAGGTAACCGCCTACCTGATGATGTCGGCGCTGTCAGCTGCGATC
CCGATCACCAACCGCATGCGCGAGGGCGCTGACAACGTGTTCACCGACTCGTCGGCGGCG
TCCATCAGCATGGCCTTCTTCGCCTTCGTCTGCCTGGCGCTCTCCGCCCTCGTCTCCGGC
TTCAAGCTCGCCAAGCAGACATACATCTGA

Peptide Sequence

PEP ID

Zm00001d038004_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:6:144866036:144869120:-1 gene:Zm00001d038004 transcript:Zm00001d038004_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein 4B1
Sequence

MADVEKATPVAAPAEGAGGDVAAGRTGAVAALLRRWRTQDLLDRSGSALRAAAWAFSLLA
FLVMACNEHGDWRQFDRYEEYRYIVAIGLLAFVYTTLQLLRHGVRLTGGQDLEPKTGLLV
DFAGDQVTAYLMMSALSAAIPITNRMREGADNVFTDSSAASISMAFFAFVCLALSALVSG
FKLAKQTYI

Transcript Sequence

Transcript ID

Zm00001d038004_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:144866036:144869120:-1 gene:Zm00001d038004 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein 4B1
Sequence

GCGACCCGCCAGCTTGAACATCCAACTGATCCAACCACCGACCCGGGCGAGCAAGCCATC
TCCGTTTCCTTGCCAGTCCCGCGAGCACCATTCACCACACCAGCGCAGCCGCCATGGCCG
ACGTCGAGAAGGCCACCCCCGTGGCCGCACCGGCCGAGGGCGCGGGCGGCGACGTGGCCG
CCGGGAGAACCGGCGCGGTGGCCGCCCTGCTGCGGCGGTGGCGGACCCAGGACCTGCTGG
ACCGGTCGGGGTCCGCGCTGCGCGCCGCGGCGTGGGCGTTCTCCCTGCTGGCGTTCCTCG
TCATGGCCTGCAACGAGCATGGGGACTGGAGGCAGTTCGACCGCTACGAGGAGTACAGGT
ACATCGTTGCCATCGGCCTGCTGGCCTTCGTCTACACGACGCTGCAGCTCCTCCGGCACG
GCGTCCGCCTCACCGGCGGCCAGGACCTGGAGCCCAAGACCGGCCTCCTCGTTGACTTCG
CCGGGGATCAGGTAACCGCCTACCTGATGATGTCGGCGCTGTCAGCTGCGATCCCGATCA
CCAACCGCATGCGCGAGGGCGCTGACAACGTGTTCACCGACTCGTCGGCGGCGTCCATCA
GCATGGCCTTCTTCGCCTTCGTCTGCCTGGCGCTCTCCGCCCTCGTCTCCGGCTTCAAGC
TCGCCAAGCAGACATACATCTGATCTGATACTCCGTACACGGACACTTGCATATACACTT
CACATATTTATTTGCTCCGTTGTGTACAGTCTGAATTGCGTGCGTTGTGTACAGTCTGAA
TTGCGTGCGTCATTTACCATTGTTCTCATTGTATACATAGATTTGGTTCATTGTGACTGT
ATAAGAGCTACCTC