Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d037952_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:6:143357184:143358853:-1 gene:Zm00001d037952 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aspartyl protease AED1
Sequence

ATGGCCCACGGCTTCGCTCGGCCTCGCCCCACCATCGACGACACCTTCCTGGAGCTCCGG
GCGCGCAGATCTGGGGCGTCCTCCCTAGCGGCCCCGTCGGTGGCTGACACGCTGCGCGCG
GACCAGCGCCGGGCGGAGTACATACTGAGGAGGGTGTCGGGGCACGGCAGCGGCGCGCCT
CAGCTGTGGGACTCCAAGGCGGCGGCGACGACGACGGTGCCAGCGAGCTGGGGGTACGAC
ATCGACACGCTCAACTACGTGGTGACGGCGAGCCTCGGCACGCCGGGCGTGGCGCAGACC
ATGGAGGTGGACACCGGCAGCGACCTGTCGTGGGTGCAGTGCAAGCCGTGCGCCGCGGCG
CCGTCGTGCTACAGCCAGAAGGACCCGCTCTTCGACCCCGCCCAGTCGTCGTCCTACGCC
GTCGTGCCCTACGGCGACGGGTCCAACACCACGGGCGTGTACAGCTCCGACACGCTGACC
CTGTCGGCGAGCAGCGCGGTGCAGGGCTTCTTCTTTGGCTGCGGGCACGCGCAGAGCGGG
CTGTTCAACGGCGTCGACGGGCTCCTGGGCCTCGGCCGCGAGCAGTCGTCGCTCGTGGAG
CAGACGGCGGGCACCTACGGCGGGGTCTTCTCCTACTGCCTCCCGACGAAGCCGTCCACC
GCGGGGTACCTGACACTGGGCGGGCCGGCGGGCGCGGCGTCGGGCTTCTCCACGACGCAG
CTGCTGCCGTCGCCGAACGCGCCGACCTACTACGTCGTGATGCTGACGGGGATCAGCGTC
GGCGGGCAGCAGCTGAGCGTGCCCGCGTCGGCGTTCGCGGGCGGGACGGCAATGACGCAG
CTCCTCAAGGGCATCAACAGCTACATGTCCTCGCTCAAGGTCCCGACGCTGTCCGAGAAC
AAGAACGCGGCGTGCCTGGCCGAGCAGCTCACGAGGCAGTTCAAGGGGCAGGAGTGCACC
AACACGTCCGTTCAAGGAGGCCATTGA

Peptide Sequence

PEP ID

Zm00001d037952_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:6:143357184:143358853:-1 gene:Zm00001d037952 transcript:Zm00001d037952_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aspartyl protease AED1
Sequence

MAHGFARPRPTIDDTFLELRARRSGASSLAAPSVADTLRADQRRAEYILRRVSGHGSGAP
QLWDSKAAATTTVPASWGYDIDTLNYVVTASLGTPGVAQTMEVDTGSDLSWVQCKPCAAA
PSCYSQKDPLFDPAQSSSYAVVPYGDGSNTTGVYSSDTLTLSASSAVQGFFFGCGHAQSG
LFNGVDGLLGLGREQSSLVEQTAGTYGGVFSYCLPTKPSTAGYLTLGGPAGAASGFSTTQ
LLPSPNAPTYYVVMLTGISVGGQQLSVPASAFAGGTAMTQLLKGINSYMSSLKVPTLSEN
KNAACLAEQLTRQFKGQECTNTSVQGGH

Transcript Sequence

Transcript ID

Zm00001d037952_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:143357184:143358853:-1 gene:Zm00001d037952 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aspartyl protease AED1
Sequence

ATGGCCCACGGCTTCGCTCGGCCTCGCCCCACCATCGACGACACCTTCCTGGAGCTCCGG
GCGCGCAGATCTGGGGCGTCCTCCCTAGCGGCCCCGTCGGTGGCTGACACGCTGCGCGCG
GACCAGCGCCGGGCGGAGTACATACTGAGGAGGGTGTCGGGGCACGGCAGCGGCGCGCCT
CAGCTGTGGGACTCCAAGGCGGCGGCGACGACGACGGTGCCAGCGAGCTGGGGGTACGAC
ATCGACACGCTCAACTACGTGGTGACGGCGAGCCTCGGCACGCCGGGCGTGGCGCAGACC
ATGGAGGTGGACACCGGCAGCGACCTGTCGTGGGTGCAGTGCAAGCCGTGCGCCGCGGCG
CCGTCGTGCTACAGCCAGAAGGACCCGCTCTTCGACCCCGCCCAGTCGTCGTCCTACGCC
GTCGTGCCCTACGGCGACGGGTCCAACACCACGGGCGTGTACAGCTCCGACACGCTGACC
CTGTCGGCGAGCAGCGCGGTGCAGGGCTTCTTCTTTGGCTGCGGGCACGCGCAGAGCGGG
CTGTTCAACGGCGTCGACGGGCTCCTGGGCCTCGGCCGCGAGCAGTCGTCGCTCGTGGAG
CAGACGGCGGGCACCTACGGCGGGGTCTTCTCCTACTGCCTCCCGACGAAGCCGTCCACC
GCGGGGTACCTGACACTGGGCGGGCCGGCGGGCGCGGCGTCGGGCTTCTCCACGACGCAG
CTGCTGCCGTCGCCGAACGCGCCGACCTACTACGTCGTGATGCTGACGGGGATCAGCGTC
GGCGGGCAGCAGCTGAGCGTGCCCGCGTCGGCGTTCGCGGGCGGGACGGCAATGACGCAG
CTCCTCAAGGGCATCAACAGCTACATGTCCTCGCTCAAGGTCCCGACGCTGTCCGAGAAC
AAGAACGCGGCGTGCCTGGCCGAGCAGCTCACGAGGCAGTTCAAGGGGCAGGAGTGCACC
AACACGTCCGTTCAAGGAGGCCATTGA