Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d037939_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:6:142830064:142843119:-1 gene:Zm00001d037939 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCTATTGATTTTTTGACTGACATAGTGGAAGATGCTCACAAACCGTCAGTGGCTGCT
ATAGATGGCATTGCTCTAGGTGGTGGATTGGAGGTTGCGATGGTTTGCCATGCTCGCATT
TCAACACCGTCAGCTCAGTTAGGACTACCTGAACTTCAACTTGGAATCATTCCTGGAATG
GGAGGGACACAACGTCTTCCCCGTCTTGTTGGTCTGCCAAAAGCCCTTGAGATGATGTTG
ACATCAAAGACTATAAAAGGCAAGATGGCACATGAACTCGGTTTAGTTGATGCTGTTACC
TCAGCTAATAAATTGGTCAACACTGCCTGTTCCTGGGCTCTGGAAATTTTTGAAAAGAAG
AAACCATGGTTCAAAAGTCTCCACAGAACTGATAGACTTCCAGATCTTGAGGAAGTGAAG
GATATTCTGAAATTTGCAAGAGTTCAAGCTGAAATGAAGGCTGCTAATGTTCAGCATCCA
ATAGTTTGCATTGATGTTATTAAAGAAGGAATAATCTCTGGCCCTCGTGCAGGCCTCATG
AAGGAAGTGCTCTCTGGGAAAATGCTTGAGCAGTCTCAAACAAGCAAAAGCTTAAGGCAC
TTTTTTTTTGCTCAGCGTGCCACTTCAAAGATTCCAAATATTACCAACATAGGTTTGACA
GCACGGAAAATTAAAAAGGCAGCTATCGTTGGGGGTGGTCTAATGGGATCCGGAATTGCA
ACAATACTGATATTGAACAACTTTAATGTTGTCTTGAAAGAAGTAAATGAACAGTTCTTA
TCTGCTGGCATTAACAGAATTAAAGTGAATTTGCAAAGTCTTGTCAGAAAGGGTCAACTT
ACTGAAGAAGATTATGAAAAGAAGCTTTCTCTGCTATGTGGTGCTCTTGACTATGAACAG
TTCAGAGATACAGATGTAGTAATTGAGGCGGTAATTGAGGATATGGTGCTGAAGCAGCAA
ATATTTTCTGACCTTGAGAAGTATTGCCATCATAATTGCATATTTGCAACAAACACTTCA
ACAATAGACCTGAACATAATTGGTCAGAAGACAGCTTCTCAGGACCGCATTGTTGGTGCA
CACTTCTTTAGCTCATGTCATGTCACTGTTGGAAATAGTTTGTACTCATCATACTTCCTC
TCAAGTTATTGTGGACCTGATTGA

Peptide Sequence

PEP ID

Zm00001d037939_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:6:142830064:142843119:-1 gene:Zm00001d037939 transcript:Zm00001d037939_T004 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSIDFLTDIVEDAHKPSVAAIDGIALGGGLEVAMVCHARISTPSAQLGLPELQLGIIPGM
GGTQRLPRLVGLPKALEMMLTSKTIKGKMAHELGLVDAVTSANKLVNTACSWALEIFEKK
KPWFKSLHRTDRLPDLEEVKDILKFARVQAEMKAANVQHPIVCIDVIKEGIISGPRAGLM
KEVLSGKMLEQSQTSKSLRHFFFAQRATSKIPNITNIGLTARKIKKAAIVGGGLMGSGIA
TILILNNFNVVLKEVNEQFLSAGINRIKVNLQSLVRKGQLTEEDYEKKLSLLCGALDYEQ
FRDTDVVIEAVIEDMVLKQQIFSDLEKYCHHNCIFATNTSTIDLNIIGQKTASQDRIVGA
HFFSSCHVTVGNSLYSSYFLSSYCGPD

Transcript Sequence

Transcript ID

Zm00001d037939_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:142830064:142843119:-1 gene:Zm00001d037939 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GATCCATGTCTATTGATTTTTTGACTGACATAGTGGAAGATGCTCACAAACCGTCAGTGG
CTGCTATAGATGGCATTGCTCTAGGTGGTGGATTGGAGGTTGCGATGGTTTGCCATGCTC
GCATTTCAACACCGTCAGCTCAGTTAGGACTACCTGAACTTCAACTTGGAATCATTCCTG
GAATGGGAGGGACACAACGTCTTCCCCGTCTTGTTGGTCTGCCAAAAGCCCTTGAGATGA
TGTTGACATCAAAGACTATAAAAGGCAAGATGGCACATGAACTCGGTTTAGTTGATGCTG
TTACCTCAGCTAATAAATTGGTCAACACTGCCTGTTCCTGGGCTCTGGAAATTTTTGAAA
AGAAGAAACCATGGTTCAAAAGTCTCCACAGAACTGATAGACTTCCAGATCTTGAGGAAG
TGAAGGATATTCTGAAATTTGCAAGAGTTCAAGCTGAAATGAAGGCTGCTAATGTTCAGC
ATCCAATAGTTTGCATTGATGTTATTAAAGAAGGAATAATCTCTGGCCCTCGTGCAGGCC
TCATGAAGGAAGTGCTCTCTGGGAAAATGCTTGAGCAGTCTCAAACAAGCAAAAGCTTAA
GGCACTTTTTTTTTGCTCAGCGTGCCACTTCAAAGATTCCAAATATTACCAACATAGGTT
TGACAGCACGGAAAATTAAAAAGGCAGCTATCGTTGGGGGTGGTCTAATGGGATCCGGAA
TTGCAACAATACTGATATTGAACAACTTTAATGTTGTCTTGAAAGAAGTAAATGAACAGT
TCTTATCTGCTGGCATTAACAGAATTAAAGTGAATTTGCAAAGTCTTGTCAGAAAGGGTC
AACTTACTGAAGAAGATTATGAAAAGAAGCTTTCTCTGCTATGTGGTGCTCTTGACTATG
AACAGTTCAGAGATACAGATGTAGTAATTGAGGCGGTAATTGAGGATATGGTGCTGAAGC
AGCAAATATTTTCTGACCTTGAGAAGTATTGCCATCATAATTGCATATTTGCAACAAACA
CTTCAACAATAGACCTGAACATAATTGGTCAGAAGACAGCTTCTCAGGACCGCATTGTTG
GTGCACACTTCTTTAGCTCATGTCATGTCACTGTTGGAAATAGTTTGTACTCATCATACT
TCCTCTCAAGTTATTGTGGACCTGATTGATTTGGCAAAGAAAATACAGAAAACACCAATA
GTTGTTGGCAACTGCACAGGTTTCGCTGTCAACCGGATGTTCTTTCCTTACGCTCAGGCA
GCTTCTTTTCTTGTTGATTATGGTCTGGATGTGTATCACATAGATCATGTGATCACACAA
TTTGGAATGCCAATGGGGCCCTTCCGATTAGCCGATCTTGTTGGTTTTGGTGTTGCTATT
GCTACAAGAAAGCAATATTACCAAAGTTATCCTGAGCGAAGTTACAAATCAATGCTTCTT
CAGATTCTTGTTGAGGATAATAGGACAGGTGAATCTTCTTGTAAGGGCTTCTATGTATAT
GATGATAAACGCAAAGCCTCTCGAGATCCTGATTTTGGGAAGTACATTGAAAAATCAAGG
AACATGGCAGGTGTTATGCAAGATCCTAAGCTGATGAAACTAACAGATAATGACATCGTG
GAGATGATCTTCTTTCCTGTGGTGAATGAAGCCTGCCGAGTGCTTGATGAGGGAATTGCT
CTCAAAGCATCTGACCTTGATGTAGCTTCCATTATGGGGATGGGTTTCCCTTCTTACAGG
GGTGGAGTAATGTTTTGGGCTGACTCGCTTGGTGCGAAATATGTGTATGACAAACTGGAT
GCATGGTCGAAGGATTATGGGGAGTTCTTCAGACCCTGTGAATATTTAGCTGTGAGAGCT
CGTCAGGGTGCATCCCTGGCTGCCAAGGTTGATGGTGTCAAATCGCGACTCTAGGGTTTT
GTTGTTCATTTGTCCGGACATGCTTATACGGACTTTGGCCTCAATGACATTGAGATGTTG
TGAAAACCCTTGAGCACCAACTGTTACAATCATGCAGTTGCAAAACCTGCACAAGTGAAT
TATACGGAGGCCTAGCGAAGTGGAAATTGCATGTGCCTTCGTGGGATTGCTGAGGATCTG
CAGCAGGAATTTCTCTGAAATATTATGTGCAGTTTTCTGAAGTGATGCTGACAACTTTGC
ATAGAATAGTTACAGGGAGTTTCTCCTAGACGTTTTGCGGGAATATACTTTGTTGCAGTG
GATTCTTATTTTTTTAAAAATAAAACTCGTGAAATCCATGGT