Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d037925_T017
CDS Infomation

cds chromosome:B73_RefGen_v4:6:142153467:142157637:-1 gene:Zm00001d037925 gene_biotype:protein_coding transcript_biotype:protein_coding description:ASF/SF2-like pre-mRNA splicing factor SRP31%3B ASF/SF2-like pre-mRNA splicing factor SRP31'

Sequence

ATGACCCGGCGGAACGGCTGTACGATCTACGTGGGCAACCTCCCCGGCGACATCCGCGAG
AGGGAAGTGGATGATCTCTTCTACAAGTATGGACGTATAGTGGAAATTGACTTGAAAATT
CCACCAAGGCCTCCTGGTTTTGCTTTTGTTGAGTTTGAGGACGCACGTGATGCTGAAGAT
GCAATATATGGCCGTGATGGATACAACTTTGATGGCCATAGGTTGCGGGTGGAATTAGCC
CATGGTGGACGAGGCACATCTTCTTTTGATCGATCTAGCAGCTATAGCAGTGCTGGACAA
CGCGGTGCCTCAAAACGTTCTGATTACCGTGTTATGGTTACTGGATTACCTTCTTCAGCA
TCATGGCAAGATCTCAAGGACCATATGCGGCGAGCTGGTGATGTCTGTTTCACTGATGTG
TATCGTGAGGCTGGAGCAACTATTGGAATAGCTGATTATACTAACTATGAAGATATGAAA
CACGCGGTATGTTTTAAAGTGTTTTCTTCTTCTTCTTCTTCCCTTTAA

Peptide Sequence

PEP ID

Zm00001d037925_P017
PEP Infomation

pep chromosome:B73_RefGen_v4:6:142153467:142157637:-1 gene:Zm00001d037925 transcript:Zm00001d037925_T017 gene_biotype:protein_coding transcript_biotype:protein_coding description:ASF/SF2-like pre-mRNA splicing factor SRP31%3B ASF/SF2-like pre-mRNA splicing factor SRP31'

Sequence

MTRRNGCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDARDAED
AIYGRDGYNFDGHRLRVELAHGGRGTSSFDRSSSYSSAGQRGASKRSDYRVMVTGLPSSA
SWQDLKDHMRRAGDVCFTDVYREAGATIGIADYTNYEDMKHAVCFKVFSSSSSSL

Transcript Sequence

Transcript ID

Zm00001d037925_T017
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:142153467:142157637:-1 gene:Zm00001d037925 gene_biotype:protein_coding transcript_biotype:protein_coding description:ASF/SF2-like pre-mRNA splicing factor SRP31%3B ASF/SF2-like pre-mRNA splicing factor SRP31'

Sequence

GACTCAAGCCTTCCTTGCTCCTTGCCGCCGTCGAGTCGTCGCAGGAACGATGACCCGGCG
GAACGGCTGTACGATCTACGTGGGCAACCTCCCCGGCGACATCCGCGAGAGGGAAGTGGA
TGATCTCTTCTACAAGTATGGACGTATAGTGGAAATTGACTTGAAAATTCCACCAAGGCC
TCCTGGTTTTGCTTTTGTTGAGTTTGAGGACGCACGTGATGCTGAAGATGCAATATATGG
CCGTGATGGATACAACTTTGATGGCCATAGGTTGCGGGTGGAATTAGCCCATGGTGGACG
AGGCACATCTTCTTTTGATCGATCTAGCAGCTATAGCAGTGCTGGACAACGCGGTGCCTC
AAAACGTTCTGATTACCGTGTTATGGTTACTGGATTACCTTCTTCAGCATCATGGCAAGA
TCTCAAGGACCATATGCGGCGAGCTGGTGATGTCTGTTTCACTGATGTGTATCGTGAGGC
TGGAGCAACTATTGGAATAGCTGATTATACTAACTATGAAGATATGAAACACGCGGTATG
TTTTAAAGTGTTTTCTTCTTCTTCTTCTTCCCTTTAAAATAGAAGTTGTGTACTGACATG
TTTTAAATAAGATTGATCACTGGAAAAGGAGAAACTTCGTGATATGTGTAATCTTTGTAC
CTGTCTGTGCATACTTGCATATTTCCATGAAGATATGTACTGACAACTAGTTACTTTTAT
CTTGTAGATAAGGAAGCTAGATGATTCTGAGTTCCGTAATGCTTTTTCAAGGACATATGT
CCGGGTGAGGGAGTATGATGCTAGGCGCAGCCGTTCTCGCTCCAGAGGCAGAAACCGCTC
TAAGTCAAGAAGCAGAAGCCACAGCCACTCGTACTCAAGAAGCAGAAGCTGCAGTTATAG
CAAGAGTAGGAGCCCAAGATCTAGATCTGCTTCAGAGTCAAAATCACCTGTTAAGGCAAG
ATCACCATCCAGATCCCCTCCTGTTTCTCCCCGGCGTGACAAGTCTGCAAGCAGGAGTCC
TGCCAGGAGCAAGAGTCTGCCCCGATCTTGTTCTCCGGCAAAATCAGAGTGAATCGGATT
CTGCACTTGAAACGTTCAGAAAGGCAGAGCTCGAGCTAAAAGATTGCTGTACGGATTATG
AGCACTGTGCTAGTAGCATTGCTGTCCCTTCCATATTTTTACAAATACTCTGTTCTTTGA
GGAGATCACTGTATGCTACTACTCTGTACCTGACATGATGCAAACGTTGTTGGTTTTTGA
ACTTAGCAGAACGATGACTTTG