Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d037891_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:6:141258083:141260086:-1 gene:Zm00001d037891 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein

Sequence

ATGGGCATGCCCCATTCCAGCTCCCTCCACCACTTCCTCCGCCACGTTTCCTTCCCTCCG
GACCCGCACCTCCTCCCCACCGCGTTCAAGTCATGCCCGACACTGCCGCTCGCCCGCGCT
CTCCACGCCGTCGCCGAGGTCAGCGGCCTCGCGCGGGACCCCTTCGTCGCCTCCTCGCTC
CTACACGCCTATCTCCGCCTCGGTACCACGGGCAACGCCCGCGCCTTGTTCGACGGAATG
CCGCGCCCGCAGAGGACCGTCGTCGGCTGGAGCGCGCTGGTCGCGGCGCACGCGGCGCGC
GGGGACGCCGAGGGCGCCTGGCGCCTGCTCGAGGAGATGCGGCGGGATGGCGGCGTGGAG
CCGAACGTGATCACCTGGAACGGGCTCGTGTCCGGGCTCAACCGCAGTGGCCGTGCCCGG
GACGCGGTCGTTGCGCTGGCGACCATGCACGGGGAAGGGCTCCTGCGTCCTGACGCCACG
GGCGTCTCGTGCGCGCTGTCTGCTGTTGGGGACGTCGGTTTGGTTTCGGTGGGCCAACAG
CTGCACGGATACGCTGTGAAGGCAGGTTGCAGGGCGGACGCCTGCGTGGTCACCGCCCTC
ATCGACATGTACGGGAAGTGCGGCCAGGCTGCAGAGGTTGTTCGGGTGTTTGATGAGTCC
AGCCACATGGATGTTGCTTCTTGCAATGCCCTTATTGCGGGACTATCTCGGAACGCGCAA
GTCTGCGAGGCACTAAGGTTGTTCAAAGAGTTTGTTGACCGGGGAGTTGAGCTGAATGTC
GTGTCCTGGACCTCGATTGTTGCTTGTTGTGTGCAGAATGGTAAGGATTTGGAAGCTGTC
GAGTTTTTCAGGGAGATGCAGGCACAAGGGACTGAACCAAACTCTGTCACGATCCCTTGT
GTGCTGCCAGCGTTTGCCAATGTTGCAGCTCTGATGCATGGGAGGTCAGCGCACTGTTTT
GCTCTCAGGAAGGGCTTTCTCCATGATGTTTATGTGAGCAGTGCTTTGGTGGACATGTAT
GCAAAGTGTGGCAGGGTTAAGGATGCGAGAATAATATTCGATACAATGGTATCTCGGAAT
GTGGTGTCATGGAATGCGATGATCGGTGGCTATGCTATGTATGGAGAGGCTGTGAATGCA
GTTTGGATGTTTCACTCAATGCTGAAGTGCAAACAAAAGCCTGACATGGTCACCTTCACC
TGCTTGCTTGCTGCTTGCACGCAAGCTGGCCTCACAGAGGAAGGGCGTCATTATTTCAAA
GAAATGCATAATGAGTATGGTGTTTCTCCGAGGATGGAACATTATGCATGTATGGTTACT
CTTCTAGGACGTGCTGGCAAGCTTGATGAGGCATATGATCTCATAAGTGACATGCCCTTT
GAGCCAGATGCTTATATTTGGGGTTCATTATTAGGCTCTTGCCGGGTTCATGGCAACGTG
GATCTGGCTGAGGTTGCAGCAGAAAAGCTCTTTCATCTAGAGCCAGAAAATGCTGGTAAT
TATGTCCTTCTCTCTAACATTTATGCTTCTAAGAAAATGTGGGATCGGGTTAATAGGGTT
AGAGAGATGATGAAGGATGTAGGCTTGAAGAAGGAAAAAGGCTGTAGCTGGATTGAGATC
AAGAACAAGGTGCATATGTTGTTGGCTGGTGATGATTCACACCCTATGATGACTGCGATA
ATTGAGAAAATAAACCAGCTTAATATTCAGATGAGGAAGCTAGGCTTTGTACCAAGCACA
GATTTTGTCCTACATGATGTGGAGGAACAAGAGAAAGATGATATTCTTGCTGTTCACAGT
GAGAAGCTAGCTGTCGCTTTGGGACTCATAAGCACTAGCCCAGGAACAACCCTTCGGGTG
ATAAAGAACCTCCGAATTTGTGGCGACTGCCATGAGGCAATGAAATTTATATCATCTTTT
GAGGGGAGGGAGATATCTGTTAGAGATACCAACAGGTTCCATCACTTCAGTGGTGGAAAA
TGTTCCTGTGGGGATTTTTGGTGA

Peptide Sequence

PEP ID

Zm00001d037891_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:6:141258083:141260086:-1 gene:Zm00001d037891 transcript:Zm00001d037891_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein

Sequence

MGMPHSSSLHHFLRHVSFPPDPHLLPTAFKSCPTLPLARALHAVAEVSGLARDPFVASSL
LHAYLRLGTTGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVE
PNVITWNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQ
LHGYAVKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQ
VCEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPC
VLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRN
VVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFK
EMHNEYGVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNV
DLAEVAAEKLFHLEPENAGNYVLLSNIYASKKMWDRVNRVREMMKDVGLKKEKGCSWIEI
KNKVHMLLAGDDSHPMMTAIIEKINQLNIQMRKLGFVPSTDFVLHDVEEQEKDDILAVHS
EKLAVALGLISTSPGTTLRVIKNLRICGDCHEAMKFISSFEGREISVRDTNRFHHFSGGK
CSCGDFW

Transcript Sequence

Transcript ID

Zm00001d037891_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:141258083:141260086:-1 gene:Zm00001d037891 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein

Sequence

ATGGGCATGCCCCATTCCAGCTCCCTCCACCACTTCCTCCGCCACGTTTCCTTCCCTCCG
GACCCGCACCTCCTCCCCACCGCGTTCAAGTCATGCCCGACACTGCCGCTCGCCCGCGCT
CTCCACGCCGTCGCCGAGGTCAGCGGCCTCGCGCGGGACCCCTTCGTCGCCTCCTCGCTC
CTACACGCCTATCTCCGCCTCGGTACCACGGGCAACGCCCGCGCCTTGTTCGACGGAATG
CCGCGCCCGCAGAGGACCGTCGTCGGCTGGAGCGCGCTGGTCGCGGCGCACGCGGCGCGC
GGGGACGCCGAGGGCGCCTGGCGCCTGCTCGAGGAGATGCGGCGGGATGGCGGCGTGGAG
CCGAACGTGATCACCTGGAACGGGCTCGTGTCCGGGCTCAACCGCAGTGGCCGTGCCCGG
GACGCGGTCGTTGCGCTGGCGACCATGCACGGGGAAGGGCTCCTGCGTCCTGACGCCACG
GGCGTCTCGTGCGCGCTGTCTGCTGTTGGGGACGTCGGTTTGGTTTCGGTGGGCCAACAG
CTGCACGGATACGCTGTGAAGGCAGGTTGCAGGGCGGACGCCTGCGTGGTCACCGCCCTC
ATCGACATGTACGGGAAGTGCGGCCAGGCTGCAGAGGTTGTTCGGGTGTTTGATGAGTCC
AGCCACATGGATGTTGCTTCTTGCAATGCCCTTATTGCGGGACTATCTCGGAACGCGCAA
GTCTGCGAGGCACTAAGGTTGTTCAAAGAGTTTGTTGACCGGGGAGTTGAGCTGAATGTC
GTGTCCTGGACCTCGATTGTTGCTTGTTGTGTGCAGAATGGTAAGGATTTGGAAGCTGTC
GAGTTTTTCAGGGAGATGCAGGCACAAGGGACTGAACCAAACTCTGTCACGATCCCTTGT
GTGCTGCCAGCGTTTGCCAATGTTGCAGCTCTGATGCATGGGAGGTCAGCGCACTGTTTT
GCTCTCAGGAAGGGCTTTCTCCATGATGTTTATGTGAGCAGTGCTTTGGTGGACATGTAT
GCAAAGTGTGGCAGGGTTAAGGATGCGAGAATAATATTCGATACAATGGTATCTCGGAAT
GTGGTGTCATGGAATGCGATGATCGGTGGCTATGCTATGTATGGAGAGGCTGTGAATGCA
GTTTGGATGTTTCACTCAATGCTGAAGTGCAAACAAAAGCCTGACATGGTCACCTTCACC
TGCTTGCTTGCTGCTTGCACGCAAGCTGGCCTCACAGAGGAAGGGCGTCATTATTTCAAA
GAAATGCATAATGAGTATGGTGTTTCTCCGAGGATGGAACATTATGCATGTATGGTTACT
CTTCTAGGACGTGCTGGCAAGCTTGATGAGGCATATGATCTCATAAGTGACATGCCCTTT
GAGCCAGATGCTTATATTTGGGGTTCATTATTAGGCTCTTGCCGGGTTCATGGCAACGTG
GATCTGGCTGAGGTTGCAGCAGAAAAGCTCTTTCATCTAGAGCCAGAAAATGCTGGTAAT
TATGTCCTTCTCTCTAACATTTATGCTTCTAAGAAAATGTGGGATCGGGTTAATAGGGTT
AGAGAGATGATGAAGGATGTAGGCTTGAAGAAGGAAAAAGGCTGTAGCTGGATTGAGATC
AAGAACAAGGTGCATATGTTGTTGGCTGGTGATGATTCACACCCTATGATGACTGCGATA
ATTGAGAAAATAAACCAGCTTAATATTCAGATGAGGAAGCTAGGCTTTGTACCAAGCACA
GATTTTGTCCTACATGATGTGGAGGAACAAGAGAAAGATGATATTCTTGCTGTTCACAGT
GAGAAGCTAGCTGTCGCTTTGGGACTCATAAGCACTAGCCCAGGAACAACCCTTCGGGTG
ATAAAGAACCTCCGAATTTGTGGCGACTGCCATGAGGCAATGAAATTTATATCATCTTTT
GAGGGGAGGGAGATATCTGTTAGAGATACCAACAGGTTCCATCACTTCAGTGGTGGAAAA
TGTTCCTGTGGGGATTTTTGGTGA