Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d037872_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:6:140520787:140530004:-1 gene:Zm00001d037872 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein BONZAI 3
Sequence	ATGTTAGTGGTCTACACTAACATCAAAGGAAAGCTAGAGGAGATTGGCCGTACTGAAGTG ATTTTAAATTCACTGGAGCCCTCATGGATTACAAAGGTTACAATGTCTTACCAATTTGAG ATTGTGCAACCACTCATATTCAGGATATATGATGTTGACACAAAGTACCACAACACTCCA GTGAAGACATTGAATTTGACACAGCAGGATTTTCTGGGGGTAGCATGCTGCAACTTATCA GAGATTGTAACAAAATTTAACCGTAGCCTGACATTGAATCTTCAGAGTGATTGTGGACAT GGTCTTCATGGAACAATGACAGTACATGCTGAAGAAAGTGACTCCTCTAGAATGGCAGTT GAGATGACTCTGCGTTGCGTGAACTTGGAAAATAAAGATGTGTTCTCCAAAAGTGATCCC TTCTTAAGAATATCTAAACTGGTAGAGACTGCTGGTCCCATTCCAATCTGCAAAACGGAA GTAGTACCTGACAACTTGAACCCTGTTTGGAGGCCAATCACTTTAACATCGCAGCAGTAT GGAAGCAAGGATAACCCACTGCTAGTTGAGTGTTTTGATTTTAATTCCAGTGGTGACCAT GAACTGATAGGGGCCTTCCAGACAACTATTACTCAGCTTGAAAATCTATATACCTCAAAG TCTGCAGCAATTTTTTACAACCACAAGGGACAAAGAAAGATGAAAGAACAATTGTTTGTG GACAAGTTTCAGGAAACAGTCCAGCATACTTTCTTAGATTATATATCCAGTGGATTTGAG CTCAATTTCATGGTGGCTATAGATTTTACTGCTTCAAATGGAGACCCACGTGTACCCCAG TCCTTGCACTACATTGACCCCTCTGGCAGACCTAATTCGTATCAACAGGCAATGCTGGGG GTTGGCGAAGTTCTGCAGTTTTATGACAATGATAGGCGATTTCCTACGTGGGGTTTTGGA GCAAGGGTACATGGTTATGTATCACATTGCTTTAACTTGAATACAGCTACAAATGACTCT GAGGTGGTTGGAGTTGAAGGCATCATGTCAGCATACACCTCTTCTCTTTACAGTGTTTCC CTTGCTGGGCCAACTATGTTCGGGCCCGTGATCAACAAAGCTGCAGATATTGCAAGCCAG TCCCTTCAATATTCAAACAATAAATATTTTGTCCTTCTCATTATCACGGACGGAGTTCTC ACTGACATCCAAGAAACAAAAGATTGCATTGTAAGGGCATCAGACCTGCCATTGTCGATT CTCATTGTAGGCGTTGGAAACGCTGATTTCAAACAAATGGAGATCTTAGACGCGGACAAT GGTAAGCGACTGGAAAGCTCTACGGGTAGGATCGCGACACGCGACATCGTCCAGTTTGTT CCCATGAGGGAAGTCCAAGGTGGCGAGATCTCCGTCGTGCAATCCCTTCTGGAGGAACTG CCCGGTCAGTTCCTGCAGTACATGCGCACTCGGGGAATCAAGCCACAGCGGGCTCCGGGG CTTGCTTCAGCGCCCGTTTACCCACCTCAGCAGTGA

Peptide Sequence

PEP ID	Zm00001d037872_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:6:140520787:140530004:-1 gene:Zm00001d037872 transcript:Zm00001d037872_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein BONZAI 3
Sequence	MLVVYTNIKGKLEEIGRTEVILNSLEPSWITKVTMSYQFEIVQPLIFRIYDVDTKYHNTP VKTLNLTQQDFLGVACCNLSEIVTKFNRSLTLNLQSDCGHGLHGTMTVHAEESDSSRMAV EMTLRCVNLENKDVFSKSDPFLRISKLVETAGPIPICKTEVVPDNLNPVWRPITLTSQQY GSKDNPLLVECFDFNSSGDHELIGAFQTTITQLENLYTSKSAAIFYNHKGQRKMKEQLFV DKFQETVQHTFLDYISSGFELNFMVAIDFTASNGDPRVPQSLHYIDPSGRPNSYQQAMLG VGEVLQFYDNDRRFPTWGFGARVHGYVSHCFNLNTATNDSEVVGVEGIMSAYTSSLYSVS LAGPTMFGPVINKAADIASQSLQYSNNKYFVLLIITDGVLTDIQETKDCIVRASDLPLSI LIVGVGNADFKQMEILDADNGKRLESSTGRIATRDIVQFVPMREVQGGEISVVQSLLEEL PGQFLQYMRTRGIKPQRAPGLASAPVYPPQQ

Transcript Sequence

Transcript ID	Zm00001d037872_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:140520787:140530004:-1 gene:Zm00001d037872 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein BONZAI 3
Sequence	ACTATAATATCCCTTGGTGCCGTTGCCCTTGCCTCAAATCTATACGTAAGTGGAAACGTT GGAGGAGATCGATCGATCGGGATGGGTGGGTGCTTCTCCGTGCACGGTGACGTGCGCGGC GGCATGGAGGGCGTCGGCGGTGGCGCGAGGACCCAGGGCGGCGCGGCGTCGTCGTCTGCG CAGCAGGGCGGGCCGAACGATGCGGTCGACTATTTCTTCCAGACGCGCGGGCTCCGCGGC CTCTACACGCCCATCGAGTTGTCATTTTCAGCATCGAAGTTGCGGAATACAGATTCCTTT TCAAAGGTGAAACCTAGCATTCTCAAGTACTTCAACCTTAATTCCATCATGGTAGTACTA ACCCGGACCCTTCCCCTTGGTTTGGGGGATGTGGCGTTGTTTTGTATGGATCCCGTCTTT CTTCTACTTAATGCAATGATACGTAGCTCTCCTGCGTATTCAAGAAAAAAACCCGATATT CAGAGGCATAATAGCATTAGCTCAAAAAAAAGATGCATGAAAGCTTGCCTTTTGTGTCAT TGAATATTCTTAGATACAAGTGATTGGTTGAGCTGTGAAAAATGAGAAGACTAAGTTGAT ACTGTTTAAAATGGTACTTGCAATACAAATTTCATATTGCTATGCCTGTATTTTACCAAC AAGTGGAGCATACAACCTTCACTTATATTACACCTTACATAAGATTAATATATGACAGTG TATAATTACTGAAACTGGACATAGATTACTTAAGTTTGCTTGGGTTACTTTACATCTCTA TTTTTTTTCTTCAAAAGGTGATATATTATATGTTTGCTCTAGAGTGATCCTATGTTAGTG GTCTACACTAACATCAAAGGAAAGCTAGAGGAGATTGGCCGTACTGAAGTGATTTTAAAT TCACTGGAGCCCTCATGGATTACAAAGGTTACAATGTCTTACCAATTTGAGATTGTGCAA CCACTCATATTCAGGATATATGATGTTGACACAAAGTACCACAACACTCCAGTGAAGACA TTGAATTTGACACAGCAGGATTTTCTGGGGGTAGCATGCTGCAACTTATCAGAGATTGTA ACAAAATTTAACCGTAGCCTGACATTGAATCTTCAGAGTGATTGTGGACATGGTCTTCAT GGAACAATGACAGTACATGCTGAAGAAAGTGACTCCTCTAGAATGGCAGTTGAGATGACT CTGCGTTGCGTGAACTTGGAAAATAAAGATGTGTTCTCCAAAAGTGATCCCTTCTTAAGA ATATCTAAACTGGTAGAGACTGCTGGTCCCATTCCAATCTGCAAAACGGAAGTAGTACCT GACAACTTGAACCCTGTTTGGAGGCCAATCACTTTAACATCGCAGCAGTATGGAAGCAAG GATAACCCACTGCTAGTTGAGTGTTTTGATTTTAATTCCAGTGGTGACCATGAACTGATA GGGGCCTTCCAGACAACTATTACTCAGCTTGAAAATCTATATACCTCAAAGTCTGCAGCA ATTTTTTACAACCACAAGGGACAAAGAAAGATGAAAGAACAATTGTTTGTGGACAAGTTT CAGGAAACAGTCCAGCATACTTTCTTAGATTATATATCCAGTGGATTTGAGCTCAATTTC ATGGTGGCTATAGATTTTACTGCTTCAAATGGAGACCCACGTGTACCCCAGTCCTTGCAC TACATTGACCCCTCTGGCAGACCTAATTCGTATCAACAGGCAATGCTGGGGGTTGGCGAA GTTCTGCAGTTTTATGACAATGATAGGCGATTTCCTACGTGGGGTTTTGGAGCAAGGGTA CATGGTTATGTATCACATTGCTTTAACTTGAATACAGCTACAAATGACTCTGAGGTGGTT GGAGTTGAAGGCATCATGTCAGCATACACCTCTTCTCTTTACAGTGTTTCCCTTGCTGGG CCAACTATGTTCGGGCCCGTGATCAACAAAGCTGCAGATATTGCAAGCCAGTCCCTTCAA TATTCAAACAATAAATATTTTGTCCTTCTCATTATCACGGACGGAGTTCTCACTGACATC CAAGAAACAAAAGATTGCATTGTAAGGGCATCAGACCTGCCATTGTCGATTCTCATTGTA GGCGTTGGAAACGCTGATTTCAAACAAATGGAGATCTTAGACGCGGACAATGGTAAGCGA CTGGAAAGCTCTACGGGTAGGATCGCGACACGCGACATCGTCCAGTTTGTTCCCATGAGG GAAGTCCAAGGTGGCGAGATCTCCGTCGTGCAATCCCTTCTGGAGGAACTGCCCGGTCAG TTCCTGCAGTACATGCGCACTCGGGGAATCAAGCCACAGCGGGCTCCGGGGCTTGCTTCA GCGCCCGTTTACCCACCTCAGCAGTGACCAGAAGAAAACGTGCACGAGCTGATCCATTTG CCTCAACTGTGGATTCCGCTAGCGTCCCGTCCCGTGGTAGCCTAGTACTCTTGTTCATAC GGTCTCTGGTTAGCTTTCTCTTTGCCGCAGTTGGTAAATATCCATGCTGTAGAATCTAGA TCCAGCACAAATAGATAGTAAAACACTGCTTTCCTCTAGGTTAAGCTAGACGATGTAAAT TCGTGCTGCAGATTGCCAAGTATTCAGGTTGTCGTGAAACGTCATTATTATCACCTGCTT TCATATTAAGTACTATCTTGCTAATAGTTGATTTCGAGCTTGTTC